Protein–RNA interactions for Protein: Q9UI47

CTNNA3, Catenin alpha-3, humanhuman

Predictions only

Length 895 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA3Q9UI47 LINC00967-201ENST00000517689 792 ntTSL 5 BASIC6.98□□□□□ -1.29
CTNNA3Q9UI47 AC060775.1-201ENST00000518241 520 ntBASIC6.98□□□□□ -1.29
CTNNA3Q9UI47 LINC01033-204ENST00000523194 715 ntTSL 2 BASIC6.98□□□□□ -1.29
CTNNA3Q9UI47 AC009396.2-201ENST00000555954 700 ntTSL 3 BASIC6.98□□□□□ -1.29
CTNNA3Q9UI47 MORF4L1-205ENST00000558502 855 ntTSL 3 BASIC6.98□□□□□ -1.29
CTNNA3Q9UI47 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC6.98□□□□□ -1.29
CTNNA3Q9UI47 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC6.98□□□□□ -1.29
CTNNA3Q9UI47 AC007639.1-201ENST00000577281 833 ntTSL 3 BASIC6.98□□□□□ -1.29
CTNNA3Q9UI47 LINC01125-220ENST00000599501 965 ntAPPRIS ALT2 TSL 5 BASIC6.98□□□□□ -1.29
CTNNA3Q9UI47 AC135983.2-201ENST00000604301 628 ntTSL 5 BASIC6.98□□□□□ -1.29
CTNNA3Q9UI47 AC100767.2-201ENST00000604840 693 ntBASIC6.98□□□□□ -1.29
CTNNA3Q9UI47 PCBP1-AS1-282ENST00000625783 826 ntTSL 5 BASIC6.98□□□□□ -1.29
CTNNA3Q9UI47 LINC01125-249ENST00000627399 1067 ntAPPRIS P5 TSL 5 BASIC6.98□□□□□ -1.29
CTNNA3Q9UI47 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC6.98□□□□□ -1.29
CTNNA3Q9UI47 NAV3-201ENST00000397909 9821 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
CTNNA3Q9UI47 AC010099.4-201ENST00000424515 1453 ntTSL 5 BASIC6.98□□□□□ -1.29
CTNNA3Q9UI47 SLC38A1-211ENST00000612161 1607 ntTSL 5 BASIC6.98□□□□□ -1.29
CTNNA3Q9UI47 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC6.97□□□□□ -1.29
CTNNA3Q9UI47 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC6.97□□□□□ -1.29
CTNNA3Q9UI47 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
CTNNA3Q9UI47 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC6.97□□□□□ -1.29
CTNNA3Q9UI47 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC6.97□□□□□ -1.29
CTNNA3Q9UI47 STMN1-202ENST00000374291 867 ntAPPRIS P1 TSL 2 BASIC6.97□□□□□ -1.29
CTNNA3Q9UI47 AC017078.1-201ENST00000416146 368 ntBASIC6.97□□□□□ -1.29
CTNNA3Q9UI47 AC019205.1-201ENST00000421830 730 ntBASIC6.97□□□□□ -1.29
CTNNA3Q9UI47 AL590399.2-201ENST00000427536 309 ntBASIC6.97□□□□□ -1.29
CTNNA3Q9UI47 RPL5P2-201ENST00000429598 854 ntBASIC6.97□□□□□ -1.29
CTNNA3Q9UI47 AC023481.1-201ENST00000435368 938 ntTSL 3 BASIC6.97□□□□□ -1.29
CTNNA3Q9UI47 AL583854.1-201ENST00000438818 613 ntTSL 5 BASIC6.97□□□□□ -1.29
CTNNA3Q9UI47 C21orf91-OT1-203ENST00000439392 497 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
CTNNA3Q9UI47 LINC00380-201ENST00000442478 353 ntTSL 2 BASIC6.97□□□□□ -1.29
CTNNA3Q9UI47 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC6.97□□□□□ -1.29
CTNNA3Q9UI47 RSU1P1-201ENST00000453416 441 ntBASIC6.97□□□□□ -1.29
CTNNA3Q9UI47 ACA64.1-201ENST00000459171 127 ntBASIC6.97□□□□□ -1.29
CTNNA3Q9UI47 AC108751.3-201ENST00000461814 1020 ntBASIC6.97□□□□□ -1.29
CTNNA3Q9UI47 SYPL1-205ENST00000470347 1193 ntTSL 3 BASIC6.97□□□□□ -1.29
CTNNA3Q9UI47 RN7SL177P-201ENST00000476596 299 ntBASIC6.97□□□□□ -1.29
CTNNA3Q9UI47 RPS4XP14-201ENST00000493072 781 ntBASIC6.97□□□□□ -1.29
CTNNA3Q9UI47 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC6.97□□□□□ -1.29
CTNNA3Q9UI47 RNU6-964P-201ENST00000516524 69 ntBASIC6.97□□□□□ -1.29
CTNNA3Q9UI47 KLRK1-204ENST00000540818 951 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
CTNNA3Q9UI47 AL049829.2-201ENST00000554010 285 ntTSL 3 BASIC6.97□□□□□ -1.29
CTNNA3Q9UI47 NPM1P42-201ENST00000560329 862 ntBASIC6.97□□□□□ -1.29
CTNNA3Q9UI47 AC090518.1-202ENST00000568246 578 ntTSL 4 BASIC6.97□□□□□ -1.29
CTNNA3Q9UI47 AP001357.1-201ENST00000586304 1053 ntBASIC6.97□□□□□ -1.29
CTNNA3Q9UI47 AC025857.2-201ENST00000602711 238 ntBASIC6.97□□□□□ -1.29
CTNNA3Q9UI47 AL034374.2-201ENST00000605281 548 ntBASIC6.97□□□□□ -1.29
CTNNA3Q9UI47 AL353684.1-201ENST00000622677 1120 ntBASIC6.97□□□□□ -1.29
CTNNA3Q9UI47 FO681491.1-202ENST00000623392 737 ntBASIC6.97□□□□□ -1.29
CTNNA3Q9UI47 OR11H2-202ENST00000641517 1085 ntBASIC6.97□□□□□ -1.29
CTNNA3Q9UI47 OR4K13-202ENST00000641664 5980 ntAPPRIS P1 BASIC6.97□□□□□ -1.29
CTNNA3Q9UI47 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC6.97□□□□□ -1.29
CTNNA3Q9UI47 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC6.97□□□□□ -1.29
CTNNA3Q9UI47 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.29
CTNNA3Q9UI47 FOXP2-203ENST00000378237 2187 ntTSL 1 (best) BASIC6.96□□□□□ -1.29
CTNNA3Q9UI47 SAMM50P1-201ENST00000455403 1399 ntBASIC6.96□□□□□ -1.29
CTNNA3Q9UI47 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC6.96□□□□□ -1.29
CTNNA3Q9UI47 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC6.96□□□□□ -1.29
CTNNA3Q9UI47 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC6.96□□□□□ -1.29
CTNNA3Q9UI47 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC6.96□□□□□ -1.29
CTNNA3Q9UI47 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC6.96□□□□□ -1.29
CTNNA3Q9UI47 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.29
CTNNA3Q9UI47 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC6.96□□□□□ -1.29
CTNNA3Q9UI47 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
CTNNA3Q9UI47 OR5M8-201ENST00000327216 1047 ntAPPRIS P1 BASIC6.96□□□□□ -1.3
CTNNA3Q9UI47 IFNA8-201ENST00000380205 1039 ntAPPRIS P1 BASIC6.96□□□□□ -1.3
CTNNA3Q9UI47 MIR1203-201ENST00000408812 85 ntBASIC6.96□□□□□ -1.3
CTNNA3Q9UI47 RN7SKP29-201ENST00000410957 272 ntBASIC6.96□□□□□ -1.3
CTNNA3Q9UI47 AC017048.1-201ENST00000412153 495 ntTSL 2 BASIC6.96□□□□□ -1.3
CTNNA3Q9UI47 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC6.96□□□□□ -1.3
CTNNA3Q9UI47 AC126120.1-201ENST00000431082 470 ntBASIC6.96□□□□□ -1.3
CTNNA3Q9UI47 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC6.96□□□□□ -1.3
CTNNA3Q9UI47 AC015983.1-201ENST00000441577 373 ntBASIC6.96□□□□□ -1.3
CTNNA3Q9UI47 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC6.96□□□□□ -1.3
CTNNA3Q9UI47 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC6.96□□□□□ -1.3
CTNNA3Q9UI47 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
CTNNA3Q9UI47 NUCB2-202ENST00000458064 1279 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
CTNNA3Q9UI47 AL157777.1-201ENST00000468100 304 ntBASIC6.96□□□□□ -1.3
CTNNA3Q9UI47 AC006539.1-201ENST00000481419 501 ntBASIC6.96□□□□□ -1.3
CTNNA3Q9UI47 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC6.96□□□□□ -1.3
CTNNA3Q9UI47 LINC02217-201ENST00000505844 687 ntTSL 2 BASIC6.96□□□□□ -1.3
CTNNA3Q9UI47 AC027308.1-201ENST00000517993 110 ntBASIC6.96□□□□□ -1.3
CTNNA3Q9UI47 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC6.96□□□□□ -1.3
CTNNA3Q9UI47 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC6.96□□□□□ -1.3
CTNNA3Q9UI47 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC6.96□□□□□ -1.3
CTNNA3Q9UI47 AP001007.3-201ENST00000560744 356 ntTSL 5 BASIC6.96□□□□□ -1.3
CTNNA3Q9UI47 MIR4260-201ENST00000583107 67 ntBASIC6.96□□□□□ -1.3
CTNNA3Q9UI47 AC127024.6-201ENST00000621598 424 ntBASIC6.96□□□□□ -1.3
CTNNA3Q9UI47 AC009120.7-201ENST00000623452 780 ntBASIC6.96□□□□□ -1.3
CTNNA3Q9UI47 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
CTNNA3Q9UI47 FTO-204ENST00000463855 3056 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
CTNNA3Q9UI47 AC117409.1-201ENST00000470499 1310 ntBASIC6.96□□□□□ -1.3
CTNNA3Q9UI47 DCDC1-207ENST00000452803 1706 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
CTNNA3Q9UI47 RORB-201ENST00000376896 9551 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
CTNNA3Q9UI47 AC011503.1-201ENST00000596326 1585 ntTSL 2 BASIC6.95□□□□□ -1.3
CTNNA3Q9UI47 LINC02397-201ENST00000504409 10626 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
CTNNA3Q9UI47 CLEC12A-203ENST00000355690 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC6.95□□□□□ -1.3
CTNNA3Q9UI47 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC6.95□□□□□ -1.3
CTNNA3Q9UI47 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC6.95□□□□□ -1.3
CTNNA3Q9UI47 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 87 ms