Protein–RNA interactions for Protein: Q9UBP4

DKK3, Dickkopf-related protein 3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DKK3Q9UBP4 HIGD1AP16-201ENST00000450986 258 ntBASIC6.32□□□□□ -1.4
DKK3Q9UBP4 SELENOT-204ENST00000480740 783 ntTSL 3 BASIC6.32□□□□□ -1.4
DKK3Q9UBP4 RPL12P30-201ENST00000488389 499 ntBASIC6.32□□□□□ -1.4
DKK3Q9UBP4 LINC01217-201ENST00000514427 562 ntTSL 4 BASIC6.32□□□□□ -1.4
DKK3Q9UBP4 SCARNA21.2-201ENST00000516600 166 ntBASIC6.32□□□□□ -1.4
DKK3Q9UBP4 AC091979.1-201ENST00000517595 706 ntTSL 2 BASIC6.32□□□□□ -1.4
DKK3Q9UBP4 TNFRSF17-201ENST00000053243 994 ntAPPRIS P2 TSL 1 (best) BASIC6.32□□□□□ -1.4
DKK3Q9UBP4 AC006512.2-201ENST00000543250 486 ntBASIC6.32□□□□□ -1.4
DKK3Q9UBP4 ETFRF1-211ENST00000557540 1259 ntAPPRIS ALT1 TSL 2 BASIC6.32□□□□□ -1.4
DKK3Q9UBP4 LINC01243-201ENST00000562065 721 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
DKK3Q9UBP4 AC093510.2-201ENST00000562820 896 ntBASIC6.32□□□□□ -1.4
DKK3Q9UBP4 AC135050.4-201ENST00000568708 504 ntTSL 5 BASIC6.32□□□□□ -1.4
DKK3Q9UBP4 MIR4502-201ENST00000580432 81 ntBASIC6.32□□□□□ -1.4
DKK3Q9UBP4 AC135178.6-201ENST00000605314 398 ntBASIC6.32□□□□□ -1.4
DKK3Q9UBP4 AL161457.2-204ENST00000609241 869 ntTSL 5 BASIC6.32□□□□□ -1.4
DKK3Q9UBP4 AC005156.1-201ENST00000613371 573 ntBASIC6.32□□□□□ -1.4
DKK3Q9UBP4 AL445649.1-201ENST00000615941 691 ntBASIC6.32□□□□□ -1.4
DKK3Q9UBP4 OR8G7P-201ENST00000616658 848 ntBASIC6.32□□□□□ -1.4
DKK3Q9UBP4 AL590410.1-201ENST00000617925 333 ntBASIC6.32□□□□□ -1.4
DKK3Q9UBP4 MIR6729-201ENST00000618194 65 ntBASIC6.32□□□□□ -1.4
DKK3Q9UBP4 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC6.32□□□□□ -1.4
DKK3Q9UBP4 AP006248.3-201ENST00000623580 594 ntBASIC6.32□□□□□ -1.4
DKK3Q9UBP4 AC011287.1-204ENST00000640300 1213 ntTSL 5 BASIC6.32□□□□□ -1.4
DKK3Q9UBP4 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
DKK3Q9UBP4 AC110373.1-201ENST00000505994 3505 ntBASIC6.32□□□□□ -1.4
DKK3Q9UBP4 ZNF26-202ENST00000534834 4853 ntAPPRIS ALT2 TSL 2 BASIC6.32□□□□□ -1.4
DKK3Q9UBP4 LINC01450-201ENST00000443406 3263 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
DKK3Q9UBP4 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
DKK3Q9UBP4 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
DKK3Q9UBP4 AP002004.1-201ENST00000532510 3530 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
DKK3Q9UBP4 KIAA2012-205ENST00000541917 3543 ntAPPRIS P2 TSL 5 BASIC6.32□□□□□ -1.4
DKK3Q9UBP4 SSX5-201ENST00000311798 1384 ntAPPRIS P4 TSL 5 BASIC6.31□□□□□ -1.4
DKK3Q9UBP4 AC020743.2-201ENST00000639870 1370 ntTSL 5 BASIC6.31□□□□□ -1.4
DKK3Q9UBP4 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
DKK3Q9UBP4 DZIP3-202ENST00000463306 4246 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
DKK3Q9UBP4 WASHC4-214ENST00000620430 5807 ntAPPRIS ALT1 TSL 1 (best) BASIC6.31□□□□□ -1.4
DKK3Q9UBP4 PHEX-AS1-201ENST00000424650 1906 ntTSL 2 BASIC6.31□□□□□ -1.4
DKK3Q9UBP4 FAM197Y6-202ENST00000442145 2340 ntTSL 2 BASIC6.31□□□□□ -1.4
DKK3Q9UBP4 RGSL1-201ENST00000294854 3696 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
DKK3Q9UBP4 LINC02019-201ENST00000608605 2060 ntBASIC6.31□□□□□ -1.4
DKK3Q9UBP4 TSLP-201ENST00000344895 736 ntAPPRIS P2 TSL 1 (best) BASIC6.31□□□□□ -1.4
DKK3Q9UBP4 SNORA27.3-201ENST00000364937 134 ntBASIC6.31□□□□□ -1.4
DKK3Q9UBP4 RNA5SP431-201ENST00000410312 120 ntBASIC6.31□□□□□ -1.4
DKK3Q9UBP4 RNU6-584P-201ENST00000410350 95 ntBASIC6.31□□□□□ -1.4
DKK3Q9UBP4 AC079630.1-201ENST00000412812 585 ntTSL 4 BASIC6.31□□□□□ -1.4
DKK3Q9UBP4 TMEM246-AS1-202ENST00000425734 466 ntTSL 2 BASIC6.31□□□□□ -1.4
DKK3Q9UBP4 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC6.31□□□□□ -1.4
DKK3Q9UBP4 AL354707.3-201ENST00000427308 331 ntBASIC6.31□□□□□ -1.4
DKK3Q9UBP4 AC009227.2-201ENST00000432599 511 ntTSL 3 BASIC6.31□□□□□ -1.4
DKK3Q9UBP4 SUMO2P1-206ENST00000445436 284 ntBASIC6.31□□□□□ -1.4
DKK3Q9UBP4 AC079612.2-201ENST00000446029 348 ntTSL 2 BASIC6.31□□□□□ -1.4
DKK3Q9UBP4 AC115618.2-201ENST00000453810 450 ntTSL 3 BASIC6.31□□□□□ -1.4
DKK3Q9UBP4 VPS25P1-201ENST00000455691 508 ntBASIC6.31□□□□□ -1.4
DKK3Q9UBP4 AC117386.1-201ENST00000474444 606 ntTSL 4 BASIC6.31□□□□□ -1.4
DKK3Q9UBP4 UBE2V1P12-201ENST00000503954 474 ntBASIC6.31□□□□□ -1.4
DKK3Q9UBP4 MGC32805-204ENST00000509993 783 ntTSL 2 BASIC6.31□□□□□ -1.4
DKK3Q9UBP4 ZCCHC10-209ENST00000513541 794 ntAPPRIS ALT2 TSL 2 BASIC6.31□□□□□ -1.4
DKK3Q9UBP4 AC034244.2-201ENST00000514668 858 ntBASIC6.31□□□□□ -1.4
DKK3Q9UBP4 AC112198.4-201ENST00000515450 351 ntBASIC6.31□□□□□ -1.4
DKK3Q9UBP4 AC097173.2-201ENST00000518701 474 ntTSL 3 BASIC6.31□□□□□ -1.4
DKK3Q9UBP4 KCTD9P4-201ENST00000526766 1166 ntBASIC6.31□□□□□ -1.4
DKK3Q9UBP4 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC6.31□□□□□ -1.4
DKK3Q9UBP4 AP001858.2-201ENST00000536213 601 ntBASIC6.31□□□□□ -1.4
DKK3Q9UBP4 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC6.31□□□□□ -1.4
DKK3Q9UBP4 CCND2-AS2-201ENST00000537370 495 ntTSL 4 BASIC6.31□□□□□ -1.4
DKK3Q9UBP4 AC244502.3-201ENST00000555460 457 ntTSL 3 BASIC6.31□□□□□ -1.4
DKK3Q9UBP4 AC093525.4-201ENST00000562232 459 ntTSL 5 BASIC6.31□□□□□ -1.4
DKK3Q9UBP4 AC002310.3-201ENST00000569728 723 ntBASIC6.31□□□□□ -1.4
DKK3Q9UBP4 AP005136.2-201ENST00000583253 1049 ntBASIC6.31□□□□□ -1.4
DKK3Q9UBP4 AC090415.2-201ENST00000584078 374 ntTSL 3 BASIC6.31□□□□□ -1.4
DKK3Q9UBP4 DYNLL1P1-201ENST00000595442 269 ntBASIC6.31□□□□□ -1.4
DKK3Q9UBP4 AP001823.1-201ENST00000604056 1003 ntBASIC6.31□□□□□ -1.4
DKK3Q9UBP4 AL158050.2-201ENST00000605336 568 ntBASIC6.31□□□□□ -1.4
DKK3Q9UBP4 SAMD9L-209ENST00000610760 1221 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
DKK3Q9UBP4 Metazoa_SRP.134-201ENST00000610965 327 ntBASIC6.31□□□□□ -1.4
DKK3Q9UBP4 AL391095.2-201ENST00000615228 378 ntTSL 3 BASIC6.31□□□□□ -1.4
DKK3Q9UBP4 AL163051.2-201ENST00000618976 735 ntBASIC6.31□□□□□ -1.4
DKK3Q9UBP4 AL109659.3-201ENST00000624985 950 ntBASIC6.31□□□□□ -1.4
DKK3Q9UBP4 AC073488.6-201ENST00000632293 754 ntBASIC6.31□□□□□ -1.4
DKK3Q9UBP4 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC6.31□□□□□ -1.4
DKK3Q9UBP4 AC141930.3-201ENST00000640435 762 ntTSL 5 BASIC6.31□□□□□ -1.4
DKK3Q9UBP4 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC6.31□□□□□ -1.4
DKK3Q9UBP4 SREK1-203ENST00000380918 2433 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
DKK3Q9UBP4 LINC00320-204ENST00000437238 2004 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
DKK3Q9UBP4 RAD51B-210ENST00000487270 2596 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
DKK3Q9UBP4 MGP-203ENST00000539261 1405 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
DKK3Q9UBP4 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC6.31□□□□□ -1.4
DKK3Q9UBP4 NBPF12-204ENST00000613714 2701 ntTSL 5 BASIC6.31□□□□□ -1.4
DKK3Q9UBP4 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
DKK3Q9UBP4 SLC9A6-212ENST00000637195 4858 ntTSL 5 BASIC6.31□□□□□ -1.4
DKK3Q9UBP4 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
DKK3Q9UBP4 EEF1A1P9-201ENST00000514975 1383 ntBASIC6.31□□□□□ -1.4
DKK3Q9UBP4 CCDC178-202ENST00000383096 3391 ntAPPRIS ALT2 TSL 5 BASIC6.31□□□□□ -1.4
DKK3Q9UBP4 RABGAP1L-218ENST00000489615 6821 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
DKK3Q9UBP4 FAR2-201ENST00000182377 2095 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
DKK3Q9UBP4 VRK2-206ENST00000435505 2446 ntAPPRIS P3 TSL 1 (best) BASIC6.3□□□□□ -1.4
DKK3Q9UBP4 TBC1D23-202ENST00000394144 3677 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
DKK3Q9UBP4 AC062029.1-202ENST00000606164 3651 ntBASIC6.3□□□□□ -1.4
DKK3Q9UBP4 BDNF-203ENST00000395978 3988 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
DKK3Q9UBP4 PCYT1A-204ENST00000419333 1325 ntTSL 5 BASIC6.3□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 92.9 ms