Protein–RNA interactions for Protein: Q9P2D1

CHD7, Chromodomain-helicase-DNA-binding protein 7, humanhuman

Predictions only

Length 2,997 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7Q9P2D1 MID1-203ENST00000380780 6195 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CHD7Q9P2D1 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CHD7Q9P2D1 NUMB-204ENST00000535282 3198 ntAPPRIS ALT1 TSL 5 BASIC5.69□□□□□ -1.5
CHD7Q9P2D1 RN7SKP149-201ENST00000363008 344 ntBASIC5.69□□□□□ -1.5
CHD7Q9P2D1 RNA5SP326-201ENST00000363209 110 ntBASIC5.69□□□□□ -1.5
CHD7Q9P2D1 AC007562.1-201ENST00000421819 517 ntBASIC5.69□□□□□ -1.5
CHD7Q9P2D1 CNOT7P1-201ENST00000429006 852 ntBASIC5.69□□□□□ -1.5
CHD7Q9P2D1 AC023274.2-201ENST00000445264 521 ntBASIC5.69□□□□□ -1.5
CHD7Q9P2D1 RPS7P6-201ENST00000485777 579 ntBASIC5.69□□□□□ -1.5
CHD7Q9P2D1 AC004052.1-201ENST00000514327 567 ntTSL 4 BASIC5.69□□□□□ -1.5
CHD7Q9P2D1 IGHVII-44-2-201ENST00000517728 250 ntBASIC5.69□□□□□ -1.5
CHD7Q9P2D1 AP006289.1-201ENST00000538089 277 ntBASIC5.69□□□□□ -1.5
CHD7Q9P2D1 AC006115.2-201ENST00000596823 202 ntBASIC5.69□□□□□ -1.5
CHD7Q9P2D1 ALB-219ENST00000621085 1418 ntTSL 5 BASIC5.69□□□□□ -1.5
CHD7Q9P2D1 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CHD7Q9P2D1 PHIP-201ENST00000275034 10460 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CHD7Q9P2D1 GABPB2-201ENST00000368916 1680 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
CHD7Q9P2D1 FAM217B-201ENST00000358293 5152 ntAPPRIS P2 TSL 2 BASIC5.69□□□□□ -1.5
CHD7Q9P2D1 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CHD7Q9P2D1 NAT1-206ENST00000518029 2162 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CHD7Q9P2D1 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CHD7Q9P2D1 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC5.69□□□□□ -1.5
CHD7Q9P2D1 OR10G4-202ENST00000641521 3623 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
CHD7Q9P2D1 OR52N1-202ENST00000641645 2545 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
CHD7Q9P2D1 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CHD7Q9P2D1 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC5.69□□□□□ -1.5
CHD7Q9P2D1 EI24P4-201ENST00000423683 1078 ntBASIC5.69□□□□□ -1.5
CHD7Q9P2D1 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC5.69□□□□□ -1.5
CHD7Q9P2D1 KCNMB2-AS1-205ENST00000451742 844 ntTSL 4 BASIC5.69□□□□□ -1.5
CHD7Q9P2D1 AC131532.1-201ENST00000555596 519 ntTSL 4 BASIC5.69□□□□□ -1.5
CHD7Q9P2D1 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC5.69□□□□□ -1.5
CHD7Q9P2D1 AC091042.1-201ENST00000579213 173 ntBASIC5.69□□□□□ -1.5
CHD7Q9P2D1 RN7SL356P-201ENST00000582228 248 ntBASIC5.69□□□□□ -1.5
CHD7Q9P2D1 AC010857.1-201ENST00000606398 594 ntBASIC5.69□□□□□ -1.5
CHD7Q9P2D1 ABHD2-201ENST00000352732 8735 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CHD7Q9P2D1 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CHD7Q9P2D1 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CHD7Q9P2D1 NUP214-202ENST00000411637 7538 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
CHD7Q9P2D1 ATXN1-201ENST00000244769 10602 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CHD7Q9P2D1 IFIT2-201ENST00000371826 3489 ntAPPRIS P2 TSL 1 (best) BASIC5.68□□□□□ -1.5
CHD7Q9P2D1 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC5.68□□□□□ -1.5
CHD7Q9P2D1 AL133419.1-201ENST00000423153 640 ntTSL 3 BASIC5.68□□□□□ -1.5
CHD7Q9P2D1 AC016027.5-201ENST00000427227 210 ntBASIC5.68□□□□□ -1.5
CHD7Q9P2D1 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC5.68□□□□□ -1.5
CHD7Q9P2D1 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC5.68□□□□□ -1.5
CHD7Q9P2D1 AC122718.1-201ENST00000439448 744 ntBASIC5.68□□□□□ -1.5
CHD7Q9P2D1 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC5.68□□□□□ -1.5
CHD7Q9P2D1 LINC02096-201ENST00000445035 953 ntTSL 5 BASIC5.68□□□□□ -1.5
CHD7Q9P2D1 DCDC1-207ENST00000452803 1706 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CHD7Q9P2D1 FAM133DP-201ENST00000464802 691 ntBASIC5.68□□□□□ -1.5
CHD7Q9P2D1 GTF2F2P1-201ENST00000511083 675 ntBASIC5.68□□□□□ -1.5
CHD7Q9P2D1 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC5.68□□□□□ -1.5
CHD7Q9P2D1 AC092747.4-201ENST00000620519 1861 ntBASIC5.68□□□□□ -1.5
CHD7Q9P2D1 CASC19-205ENST00000641013 1411 ntBASIC5.68□□□□□ -1.5
CHD7Q9P2D1 USP8-204ENST00000425032 3559 ntTSL 2 BASIC5.68□□□□□ -1.5
CHD7Q9P2D1 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CHD7Q9P2D1 TAF8-201ENST00000372977 6680 ntAPPRIS P2 TSL 1 (best) BASIC5.68□□□□□ -1.5
CHD7Q9P2D1 ACACB-203ENST00000377854 6588 ntTSL 5 BASIC5.68□□□□□ -1.5
CHD7Q9P2D1 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC5.68□□□□□ -1.5
CHD7Q9P2D1 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC5.68□□□□□ -1.5
CHD7Q9P2D1 MME-203ENST00000460393 5622 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CHD7Q9P2D1 SPTAN1-202ENST00000372731 7889 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
CHD7Q9P2D1 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
CHD7Q9P2D1 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CHD7Q9P2D1 OFD1P17-201ENST00000437639 3018 ntBASIC5.68□□□□□ -1.5
CHD7Q9P2D1 IL13RA2-202ENST00000371936 1498 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
CHD7Q9P2D1 GPR155-203ENST00000392552 6730 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CHD7Q9P2D1 PTPRB-208ENST00000550358 6583 ntTSL 2 BASIC5.68□□□□□ -1.5
CHD7Q9P2D1 U3.3-201ENST00000362986 216 ntBASIC5.68□□□□□ -1.5
CHD7Q9P2D1 TSACC-201ENST00000368251 438 ntAPPRIS P1 TSL 3 BASIC5.68□□□□□ -1.5
CHD7Q9P2D1 SNX10-203ENST00000409367 746 ntTSL 5 BASIC5.68□□□□□ -1.5
CHD7Q9P2D1 NRBF2P2-201ENST00000413087 861 ntBASIC5.68□□□□□ -1.5
CHD7Q9P2D1 AC093414.1-201ENST00000434712 514 ntBASIC5.68□□□□□ -1.5
CHD7Q9P2D1 LINC02218-202ENST00000504998 582 ntTSL 4 BASIC5.68□□□□□ -1.5
CHD7Q9P2D1 MIR1254-2-201ENST00000579553 63 ntBASIC5.68□□□□□ -1.5
CHD7Q9P2D1 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CHD7Q9P2D1 CCL4L2-217ENST00000620250 667 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CHD7Q9P2D1 CCL4-203ENST00000621626 552 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CHD7Q9P2D1 AC099494.2-201ENST00000623371 978 ntBASIC5.68□□□□□ -1.5
CHD7Q9P2D1 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CHD7Q9P2D1 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CHD7Q9P2D1 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
CHD7Q9P2D1 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
CHD7Q9P2D1 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CHD7Q9P2D1 AC091046.3-201ENST00000631455 1574 ntBASIC5.68□□□□□ -1.5
CHD7Q9P2D1 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC5.68□□□□□ -1.5
CHD7Q9P2D1 ATMIN-206ENST00000566488 5343 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CHD7Q9P2D1 PTPRG-AS1-204ENST00000474795 2661 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CHD7Q9P2D1 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC5.67□□□□□ -1.5
CHD7Q9P2D1 UBE2FP2-201ENST00000566646 462 ntBASIC5.67□□□□□ -1.5
CHD7Q9P2D1 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC5.67□□□□□ -1.5
CHD7Q9P2D1 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC5.67□□□□□ -1.5
CHD7Q9P2D1 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC5.67□□□□□ -1.5
CHD7Q9P2D1 AC005377.1-201ENST00000605126 456 ntBASIC5.67□□□□□ -1.5
CHD7Q9P2D1 AL590065.1-201ENST00000603371 4774 ntBASIC5.67□□□□□ -1.5
CHD7Q9P2D1 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC5.67□□□□□ -1.5
CHD7Q9P2D1 AC009948.3-201ENST00000603415 1798 ntBASIC5.67□□□□□ -1.5
CHD7Q9P2D1 AC006511.3-201ENST00000624929 1783 ntBASIC5.67□□□□□ -1.5
CHD7Q9P2D1 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
CHD7Q9P2D1 KIF27-201ENST00000297814 4653 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 85.9 ms