Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 CYP4F27P-201ENST00000514557 494 ntBASIC6.71□□□□□ -1.34
COL20A1Q9P218 LINC00861-202ENST00000517869 606 ntTSL 5 BASIC6.71□□□□□ -1.34
COL20A1Q9P218 AC112191.2-201ENST00000522428 333 ntBASIC6.71□□□□□ -1.34
COL20A1Q9P218 AC025366.1-201ENST00000523264 202 ntTSL 3 BASIC6.71□□□□□ -1.34
COL20A1Q9P218 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC6.71□□□□□ -1.34
COL20A1Q9P218 VEPH1-219ENST00000537559 992 ntTSL 5 BASIC6.71□□□□□ -1.34
COL20A1Q9P218 TNFSF11-205ENST00000544862 818 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
COL20A1Q9P218 AL133166.1-205ENST00000548306 569 ntTSL 4 BASIC6.71□□□□□ -1.34
COL20A1Q9P218 DPPA2P4-201ENST00000563717 878 ntBASIC6.71□□□□□ -1.34
COL20A1Q9P218 AC008770.4-201ENST00000586394 468 ntTSL 3 BASIC6.71□□□□□ -1.34
COL20A1Q9P218 DNAJC19P3-201ENST00000594491 331 ntBASIC6.71□□□□□ -1.34
COL20A1Q9P218 LINC01966-201ENST00000595809 821 ntTSL 5 BASIC6.71□□□□□ -1.34
COL20A1Q9P218 LINC01050-201ENST00000604485 760 ntTSL 3 BASIC6.71□□□□□ -1.34
COL20A1Q9P218 AL683813.2-201ENST00000605245 502 ntBASIC6.71□□□□□ -1.34
COL20A1Q9P218 AC145423.1-201ENST00000605712 336 ntBASIC6.71□□□□□ -1.34
COL20A1Q9P218 AL589745.2-201ENST00000616366 555 ntTSL 4 BASIC6.71□□□□□ -1.34
COL20A1Q9P218 LINC02335-201ENST00000616578 659 ntTSL 3 BASIC6.71□□□□□ -1.34
COL20A1Q9P218 CU638689.1-201ENST00000623225 897 ntTSL 3 BASIC6.71□□□□□ -1.34
COL20A1Q9P218 CU634019.4-201ENST00000623347 897 ntTSL 3 BASIC6.71□□□□□ -1.34
COL20A1Q9P218 AC097372.4-201ENST00000625025 466 ntBASIC6.71□□□□□ -1.34
COL20A1Q9P218 ACOD1-202ENST00000449753 2097 ntAPPRIS ALT2 TSL 3 BASIC6.71□□□□□ -1.34
COL20A1Q9P218 AL080276.2-201ENST00000637995 2090 ntTSL 3 BASIC6.71□□□□□ -1.34
COL20A1Q9P218 SMC1A-202ENST00000375340 9930 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
COL20A1Q9P218 GSTCD-202ENST00000394728 2416 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.34
COL20A1Q9P218 MDM4-203ENST00000367182 10073 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
COL20A1Q9P218 ZNF254-207ENST00000613065 4244 ntTSL 3 BASIC6.71□□□□□ -1.34
COL20A1Q9P218 LRMDA-208ENST00000496424 3923 ntTSL 2 BASIC6.71□□□□□ -1.34
COL20A1Q9P218 AC010099.4-201ENST00000424515 1453 ntTSL 5 BASIC6.71□□□□□ -1.34
COL20A1Q9P218 CNTN5-204ENST00000524871 6258 ntAPPRIS P4 TSL 1 (best) BASIC6.71□□□□□ -1.34
COL20A1Q9P218 TRIM64-201ENST00000533122 2691 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
COL20A1Q9P218 NEDD9-202ENST00000379446 4536 ntAPPRIS P3 TSL 1 (best) BASIC6.71□□□□□ -1.34
COL20A1Q9P218 SLC9A6-212ENST00000637195 4858 ntTSL 5 BASIC6.71□□□□□ -1.34
COL20A1Q9P218 TRAPPC11-209ENST00000512476 2546 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
COL20A1Q9P218 AC010401.2-201ENST00000575137 4934 ntBASIC6.71□□□□□ -1.34
COL20A1Q9P218 ELOVL5-203ENST00000370918 3081 ntTSL 2 BASIC6.7□□□□□ -1.34
COL20A1Q9P218 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
COL20A1Q9P218 AC083899.2-201ENST00000423285 1376 ntBASIC6.7□□□□□ -1.34
COL20A1Q9P218 NOSTRIN-207ENST00000445023 1569 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
COL20A1Q9P218 CACNA1E-209ENST00000621551 14886 ntAPPRIS ALT2 TSL 5 BASIC6.7□□□□□ -1.34
COL20A1Q9P218 NME5-201ENST00000265191 1198 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
COL20A1Q9P218 OR10A2-201ENST00000307322 1053 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
COL20A1Q9P218 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
COL20A1Q9P218 FAIM-204ENST00000393035 946 ntAPPRIS P3 TSL 1 (best) BASIC6.7□□□□□ -1.34
COL20A1Q9P218 AC005522.1-201ENST00000395416 346 ntBASIC6.7□□□□□ -1.34
COL20A1Q9P218 METTL5-204ENST00000409340 472 ntTSL 5 BASIC6.7□□□□□ -1.34
COL20A1Q9P218 RN7SKP229-201ENST00000410465 302 ntBASIC6.7□□□□□ -1.34
COL20A1Q9P218 RN7SKP286-201ENST00000410894 299 ntBASIC6.7□□□□□ -1.34
COL20A1Q9P218 MYL6P5-201ENST00000412707 459 ntBASIC6.7□□□□□ -1.34
COL20A1Q9P218 TRIM60P17-201ENST00000415181 719 ntBASIC6.7□□□□□ -1.34
COL20A1Q9P218 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC6.7□□□□□ -1.34
COL20A1Q9P218 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC6.7□□□□□ -1.34
COL20A1Q9P218 GTF3AP1-201ENST00000416942 1004 ntBASIC6.7□□□□□ -1.34
COL20A1Q9P218 LINC01820-201ENST00000418415 570 ntTSL 2 BASIC6.7□□□□□ -1.34
COL20A1Q9P218 MTND2P15-201ENST00000418575 892 ntBASIC6.7□□□□□ -1.34
COL20A1Q9P218 ISM1-AS1-201ENST00000431407 652 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
COL20A1Q9P218 AL731534.1-201ENST00000434711 269 ntBASIC6.7□□□□□ -1.34
COL20A1Q9P218 GAPDHP48-201ENST00000436626 961 ntBASIC6.7□□□□□ -1.34
COL20A1Q9P218 ARL5AP3-201ENST00000439327 386 ntBASIC6.7□□□□□ -1.34
COL20A1Q9P218 AL663074.2-201ENST00000440621 479 ntBASIC6.7□□□□□ -1.34
COL20A1Q9P218 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC6.7□□□□□ -1.34
COL20A1Q9P218 EFCAB10-203ENST00000480514 740 ntAPPRIS ALT1 TSL 1 (best) BASIC6.7□□□□□ -1.34
COL20A1Q9P218 NENFP3-201ENST00000503735 313 ntBASIC6.7□□□□□ -1.34
COL20A1Q9P218 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
COL20A1Q9P218 SEMA6A-AS1-202ENST00000508424 862 ntTSL 3 BASIC6.7□□□□□ -1.34
COL20A1Q9P218 CENPK-210ENST00000510354 1124 ntTSL 5 BASIC6.7□□□□□ -1.34
COL20A1Q9P218 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC6.7□□□□□ -1.34
COL20A1Q9P218 OR4V1P-201ENST00000525394 1140 ntBASIC6.7□□□□□ -1.34
COL20A1Q9P218 NPM1P5-201ENST00000557228 838 ntBASIC6.7□□□□□ -1.34
COL20A1Q9P218 AC068722.1-202ENST00000559600 655 ntTSL 3 BASIC6.7□□□□□ -1.34
COL20A1Q9P218 AC087477.5-202ENST00000560242 389 ntTSL 3 BASIC6.7□□□□□ -1.34
COL20A1Q9P218 MRPS21P9-201ENST00000571150 257 ntBASIC6.7□□□□□ -1.34
COL20A1Q9P218 AC010547.6-201ENST00000571789 193 ntBASIC6.7□□□□□ -1.34
COL20A1Q9P218 MIR4301-201ENST00000577203 66 ntBASIC6.7□□□□□ -1.34
COL20A1Q9P218 PRELID3BP3-201ENST00000584963 545 ntBASIC6.7□□□□□ -1.34
COL20A1Q9P218 AC091151.1-201ENST00000587369 726 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
COL20A1Q9P218 BNIP3P19-201ENST00000605397 577 ntBASIC6.7□□□□□ -1.34
COL20A1Q9P218 AL596275.2-208ENST00000641192 594 ntBASIC6.7□□□□□ -1.34
COL20A1Q9P218 ZNF490-201ENST00000311437 4237 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
COL20A1Q9P218 LRRC7-202ENST00000310961 6507 ntAPPRIS ALT2 TSL 5 BASIC6.7□□□□□ -1.34
COL20A1Q9P218 TMED10-201ENST00000303575 4127 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
COL20A1Q9P218 ZNF19-206ENST00000565100 2087 ntTSL 5 BASIC6.7□□□□□ -1.34
COL20A1Q9P218 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
COL20A1Q9P218 SLC2A14-203ENST00000431042 3458 ntAPPRIS ALT2 TSL 1 (best) BASIC6.7□□□□□ -1.34
COL20A1Q9P218 FGF1-216ENST00000621536 4062 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
COL20A1Q9P218 ACACA-231ENST00000614428 9554 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
COL20A1Q9P218 AL662795.2-201ENST00000624252 3706 ntBASIC6.7□□□□□ -1.34
COL20A1Q9P218 MAGI2-235ENST00000637282 3174 ntTSL 5 BASIC6.69□□□□□ -1.34
COL20A1Q9P218 AGBL1-201ENST00000441037 3551 ntAPPRIS ALT2 TSL 5 BASIC6.69□□□□□ -1.34
COL20A1Q9P218 ZNF208-201ENST00000397126 3992 ntAPPRIS P1 TSL 3 BASIC6.69□□□□□ -1.34
COL20A1Q9P218 PCDH18-203ENST00000507846 4625 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
COL20A1Q9P218 ENTPD1-AS1-212ENST00000458228 3274 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
COL20A1Q9P218 CUZD1-205ENST00000368904 2903 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
COL20A1Q9P218 ZC3H11A-201ENST00000332127 5015 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
COL20A1Q9P218 TCEAL7-201ENST00000332431 1177 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
COL20A1Q9P218 AL662874.1-201ENST00000426065 230 ntBASIC6.69□□□□□ -1.34
COL20A1Q9P218 NPM1P26-201ENST00000426339 738 ntBASIC6.69□□□□□ -1.34
COL20A1Q9P218 AL354793.1-201ENST00000446028 713 ntTSL 3 BASIC6.69□□□□□ -1.34
COL20A1Q9P218 RPSAP37-201ENST00000470913 821 ntBASIC6.69□□□□□ -1.34
COL20A1Q9P218 AC092590.1-201ENST00000471672 737 ntTSL 3 BASIC6.69□□□□□ -1.34
COL20A1Q9P218 RPS17P15-201ENST00000475609 349 ntBASIC6.69□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 127.1 ms