Protein–RNA interactions for Protein: Q9P0L0

VAPA, Vesicle-associated membrane protein-associated protein A, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPAQ9P0L0 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
VAPAQ9P0L0 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
VAPAQ9P0L0 LINC02352-202ENST00000559292 1450 ntTSL 5 BASIC5.37□□□□□ -1.55
VAPAQ9P0L0 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
VAPAQ9P0L0 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
VAPAQ9P0L0 PSMA8-205ENST00000612461 1619 ntTSL 5 BASIC5.37□□□□□ -1.55
VAPAQ9P0L0 ABCC13-202ENST00000463099 3842 ntBASIC5.37□□□□□ -1.55
VAPAQ9P0L0 ADAM20-201ENST00000256389 2795 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
VAPAQ9P0L0 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC5.37□□□□□ -1.55
VAPAQ9P0L0 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
VAPAQ9P0L0 CTDSPL2-204ENST00000558966 1895 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
VAPAQ9P0L0 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC5.36□□□□□ -1.55
VAPAQ9P0L0 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
VAPAQ9P0L0 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC5.36□□□□□ -1.55
VAPAQ9P0L0 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC5.36□□□□□ -1.55
VAPAQ9P0L0 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
VAPAQ9P0L0 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
VAPAQ9P0L0 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
VAPAQ9P0L0 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
VAPAQ9P0L0 TAAR1-201ENST00000275216 1020 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
VAPAQ9P0L0 RNA5SP279-201ENST00000365513 117 ntBASIC5.36□□□□□ -1.55
VAPAQ9P0L0 PTPN20-208ENST00000395727 790 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
VAPAQ9P0L0 GCNT1P4-201ENST00000404096 329 ntBASIC5.36□□□□□ -1.55
VAPAQ9P0L0 AC078883.1-203ENST00000416080 654 ntTSL 3 BASIC5.36□□□□□ -1.55
VAPAQ9P0L0 RNF10P1-201ENST00000418589 369 ntBASIC5.36□□□□□ -1.55
VAPAQ9P0L0 NDUFB4P8-201ENST00000435351 367 ntBASIC5.36□□□□□ -1.55
VAPAQ9P0L0 PCBP2P1-201ENST00000437262 977 ntBASIC5.36□□□□□ -1.55
VAPAQ9P0L0 TUBB4BP6-201ENST00000437576 479 ntBASIC5.36□□□□□ -1.55
VAPAQ9P0L0 LINC01781-202ENST00000443104 591 ntTSL 2 BASIC5.36□□□□□ -1.55
VAPAQ9P0L0 RPL5P7-201ENST00000444235 813 ntBASIC5.36□□□□□ -1.55
VAPAQ9P0L0 AC073610.1-201ENST00000489971 396 ntBASIC5.36□□□□□ -1.55
VAPAQ9P0L0 GAPDHP71-201ENST00000511530 1003 ntBASIC5.36□□□□□ -1.55
VAPAQ9P0L0 AC020937.1-201ENST00000519677 1013 ntBASIC5.36□□□□□ -1.55
VAPAQ9P0L0 AC084125.1-201ENST00000525461 429 ntTSL 3 BASIC5.36□□□□□ -1.55
VAPAQ9P0L0 VPS29-210ENST00000552130 1057 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
VAPAQ9P0L0 AC006530.1-201ENST00000555980 571 ntBASIC5.36□□□□□ -1.55
VAPAQ9P0L0 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC5.36□□□□□ -1.55
VAPAQ9P0L0 AC011468.3-201ENST00000597886 332 ntTSL 3 BASIC5.36□□□□□ -1.55
VAPAQ9P0L0 AC139792.1-201ENST00000607051 647 ntBASIC5.36□□□□□ -1.55
VAPAQ9P0L0 AL139124.1-201ENST00000609123 421 ntBASIC5.36□□□□□ -1.55
VAPAQ9P0L0 AC108673.3-201ENST00000609183 335 ntBASIC5.36□□□□□ -1.55
VAPAQ9P0L0 MUC1-221ENST00000610359 1101 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
VAPAQ9P0L0 AC010632.3-201ENST00000611377 369 ntBASIC5.36□□□□□ -1.55
VAPAQ9P0L0 MIR6774-201ENST00000614651 70 ntBASIC5.36□□□□□ -1.55
VAPAQ9P0L0 MUC1-227ENST00000615517 951 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
VAPAQ9P0L0 CCDC195-201ENST00000638102 606 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
VAPAQ9P0L0 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
VAPAQ9P0L0 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC5.36□□□□□ -1.55
VAPAQ9P0L0 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC5.36□□□□□ -1.55
VAPAQ9P0L0 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC5.36□□□□□ -1.55
VAPAQ9P0L0 AC010099.4-201ENST00000424515 1453 ntTSL 5 BASIC5.36□□□□□ -1.55
VAPAQ9P0L0 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC5.36□□□□□ -1.55
VAPAQ9P0L0 AL162456.1-201ENST00000634535 2006 ntBASIC5.36□□□□□ -1.55
VAPAQ9P0L0 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
VAPAQ9P0L0 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC5.36□□□□□ -1.55
VAPAQ9P0L0 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
VAPAQ9P0L0 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC5.35□□□□□ -1.55
VAPAQ9P0L0 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC5.35□□□□□ -1.55
VAPAQ9P0L0 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC5.35□□□□□ -1.55
VAPAQ9P0L0 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC5.35□□□□□ -1.55
VAPAQ9P0L0 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
VAPAQ9P0L0 EPS8-207ENST00000540613 2204 ntTSL 2 BASIC5.35□□□□□ -1.55
VAPAQ9P0L0 RPS2P45-201ENST00000469997 2057 ntBASIC5.35□□□□□ -1.55
VAPAQ9P0L0 AC027088.4-201ENST00000611559 1947 ntBASIC5.35□□□□□ -1.55
VAPAQ9P0L0 CYP3A7-CYP3A51P-202ENST00000620220 1704 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
VAPAQ9P0L0 AL390726.6-201ENST00000637760 1654 ntTSL 5 BASIC5.35□□□□□ -1.55
VAPAQ9P0L0 AF287957.1-201ENST00000607368 1595 ntBASIC5.35□□□□□ -1.55
VAPAQ9P0L0 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC5.35□□□□□ -1.55
VAPAQ9P0L0 MTCO1P7-201ENST00000419523 1542 ntBASIC5.35□□□□□ -1.55
VAPAQ9P0L0 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
VAPAQ9P0L0 LINC00102-201ENST00000445785 1340 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
VAPAQ9P0L0 INSIG2-208ENST00000614681 1347 ntTSL 5 BASIC5.35□□□□□ -1.55
VAPAQ9P0L0 SCGB3A2-201ENST00000296694 515 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
VAPAQ9P0L0 OR4S2-201ENST00000312422 936 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
VAPAQ9P0L0 RNA5SP500-201ENST00000364486 119 ntBASIC5.35□□□□□ -1.55
VAPAQ9P0L0 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
VAPAQ9P0L0 RBBP4P5-201ENST00000398583 1266 ntBASIC5.35□□□□□ -1.55
VAPAQ9P0L0 UBE2F-204ENST00000409953 924 ntTSL 3 BASIC5.35□□□□□ -1.55
VAPAQ9P0L0 LYST-AS1-201ENST00000412098 521 ntTSL 3 BASIC5.35□□□□□ -1.55
VAPAQ9P0L0 MRPL53P1-201ENST00000414323 319 ntBASIC5.35□□□□□ -1.55
VAPAQ9P0L0 AC079809.1-201ENST00000415468 276 ntBASIC5.35□□□□□ -1.55
VAPAQ9P0L0 LINC01638-201ENST00000418271 552 ntTSL 3 BASIC5.35□□□□□ -1.55
VAPAQ9P0L0 Z82198.3-201ENST00000421145 199 ntBASIC5.35□□□□□ -1.55
VAPAQ9P0L0 AC104463.2-201ENST00000428573 314 ntTSL 5 BASIC5.35□□□□□ -1.55
VAPAQ9P0L0 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC5.35□□□□□ -1.55
VAPAQ9P0L0 AL356121.1-201ENST00000442911 156 ntBASIC5.35□□□□□ -1.55
VAPAQ9P0L0 AC004870.2-201ENST00000445615 831 ntTSL 3 BASIC5.35□□□□□ -1.55
VAPAQ9P0L0 AL158835.1-204ENST00000449693 371 ntTSL 3 BASIC5.35□□□□□ -1.55
VAPAQ9P0L0 AC004692.2-201ENST00000457315 355 ntTSL 3 BASIC5.35□□□□□ -1.55
VAPAQ9P0L0 AC090602.1-201ENST00000469695 252 ntBASIC5.35□□□□□ -1.55
VAPAQ9P0L0 AC098847.1-201ENST00000473094 348 ntBASIC5.35□□□□□ -1.55
VAPAQ9P0L0 SCGB3A2-202ENST00000504320 440 ntTSL 3 BASIC5.35□□□□□ -1.55
VAPAQ9P0L0 AC239584.1-201ENST00000510419 732 ntTSL 5 BASIC5.35□□□□□ -1.55
VAPAQ9P0L0 AC097537.1-201ENST00000514864 1213 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
VAPAQ9P0L0 RN7SKP238-201ENST00000516483 249 ntBASIC5.35□□□□□ -1.55
VAPAQ9P0L0 RAB30-209ENST00000532548 644 ntTSL 3 BASIC5.35□□□□□ -1.55
VAPAQ9P0L0 RERGL-203ENST00000538724 973 ntAPPRIS P1 TSL 2 BASIC5.35□□□□□ -1.55
VAPAQ9P0L0 RPA2P1-201ENST00000556557 721 ntBASIC5.35□□□□□ -1.55
VAPAQ9P0L0 AC027216.1-201ENST00000577726 685 ntBASIC5.35□□□□□ -1.55
VAPAQ9P0L0 PACRG-210ENST00000611387 279 ntTSL 5 BASIC5.35□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 377.2 ms