Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 CYTOR-204ENST00000409898 560 ntTSL 5 BASIC6.59□□□□□ -1.35
CDK5RAP1Q96SZ6 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC6.59□□□□□ -1.35
CDK5RAP1Q96SZ6 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC6.59□□□□□ -1.35
CDK5RAP1Q96SZ6 Z85994.2-201ENST00000434327 452 ntBASIC6.59□□□□□ -1.35
CDK5RAP1Q96SZ6 SLC6A13-202ENST00000436453 1101 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
CDK5RAP1Q96SZ6 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC6.59□□□□□ -1.35
CDK5RAP1Q96SZ6 EIF2S2P2-201ENST00000447161 982 ntBASIC6.59□□□□□ -1.35
CDK5RAP1Q96SZ6 AL121718.1-201ENST00000449463 387 ntTSL 3 BASIC6.59□□□□□ -1.35
CDK5RAP1Q96SZ6 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC6.59□□□□□ -1.35
CDK5RAP1Q96SZ6 AL358075.1-201ENST00000450004 649 ntTSL 3 BASIC6.59□□□□□ -1.35
CDK5RAP1Q96SZ6 LINC00483-203ENST00000450727 686 ntTSL 3 BASIC6.59□□□□□ -1.35
CDK5RAP1Q96SZ6 MIR4435-2HG-214ENST00000453478 560 ntTSL 4 BASIC6.59□□□□□ -1.35
CDK5RAP1Q96SZ6 ANKRD26P4-201ENST00000455755 950 ntBASIC6.59□□□□□ -1.35
CDK5RAP1Q96SZ6 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC6.59□□□□□ -1.35
CDK5RAP1Q96SZ6 TNS3-209ENST00000458317 1156 ntTSL 5 BASIC6.59□□□□□ -1.35
CDK5RAP1Q96SZ6 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC6.59□□□□□ -1.35
CDK5RAP1Q96SZ6 LINC01214-201ENST00000471222 335 ntTSL 5 BASIC6.59□□□□□ -1.35
CDK5RAP1Q96SZ6 AC020898.1-201ENST00000474167 787 ntBASIC6.59□□□□□ -1.35
CDK5RAP1Q96SZ6 AP001960.1-201ENST00000506494 658 ntBASIC6.59□□□□□ -1.35
CDK5RAP1Q96SZ6 AC095052.1-201ENST00000509955 863 ntBASIC6.59□□□□□ -1.35
CDK5RAP1Q96SZ6 MTCYBP37-201ENST00000510642 1133 ntBASIC6.59□□□□□ -1.35
CDK5RAP1Q96SZ6 HSD3BP3-201ENST00000514706 994 ntBASIC6.59□□□□□ -1.35
CDK5RAP1Q96SZ6 RNA5SP206-201ENST00000516703 121 ntBASIC6.59□□□□□ -1.35
CDK5RAP1Q96SZ6 NRON-201ENST00000517270 370 ntBASIC6.59□□□□□ -1.35
CDK5RAP1Q96SZ6 LINC00535-203ENST00000520096 790 ntTSL 3 BASIC6.59□□□□□ -1.35
CDK5RAP1Q96SZ6 KCTD21-AS1-203ENST00000527321 586 ntTSL 3 BASIC6.59□□□□□ -1.35
CDK5RAP1Q96SZ6 AC090592.1-202ENST00000533049 568 ntTSL 4 BASIC6.59□□□□□ -1.35
CDK5RAP1Q96SZ6 AC084121.1-201ENST00000533882 835 ntBASIC6.59□□□□□ -1.35
CDK5RAP1Q96SZ6 LRTOMT-215ENST00000538478 814 ntTSL 2 BASIC6.59□□□□□ -1.35
CDK5RAP1Q96SZ6 LINC02454-201ENST00000539116 589 ntTSL 4 BASIC6.59□□□□□ -1.35
CDK5RAP1Q96SZ6 LRTOMT-218ENST00000541614 726 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
CDK5RAP1Q96SZ6 AC090502.3-201ENST00000552046 529 ntTSL 3 BASIC6.59□□□□□ -1.35
CDK5RAP1Q96SZ6 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC6.59□□□□□ -1.35
CDK5RAP1Q96SZ6 AC009167.1-201ENST00000568317 579 ntTSL 4 BASIC6.59□□□□□ -1.35
CDK5RAP1Q96SZ6 AC136443.4-201ENST00000568759 579 ntTSL 4 BASIC6.59□□□□□ -1.35
CDK5RAP1Q96SZ6 OR1E3-201ENST00000575608 948 ntBASIC6.59□□□□□ -1.35
CDK5RAP1Q96SZ6 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC6.59□□□□□ -1.35
CDK5RAP1Q96SZ6 TRIM37-212ENST00000584889 353 ntTSL 2 BASIC6.59□□□□□ -1.35
CDK5RAP1Q96SZ6 AC010271.1-201ENST00000599050 558 ntTSL 4 BASIC6.59□□□□□ -1.35
CDK5RAP1Q96SZ6 LAMTOR5-207ENST00000602858 553 ntTSL 2 BASIC6.59□□□□□ -1.35
CDK5RAP1Q96SZ6 RPSAP75-201ENST00000605848 301 ntBASIC6.59□□□□□ -1.35
CDK5RAP1Q96SZ6 AC011939.3-201ENST00000613686 466 ntBASIC6.59□□□□□ -1.35
CDK5RAP1Q96SZ6 AC095038.2-201ENST00000621464 1070 ntBASIC6.59□□□□□ -1.35
CDK5RAP1Q96SZ6 AL590396.4-201ENST00000636779 956 ntBASIC6.59□□□□□ -1.35
CDK5RAP1Q96SZ6 TTC33-206ENST00000636863 1149 ntTSL 5 BASIC6.59□□□□□ -1.35
CDK5RAP1Q96SZ6 NUMB-204ENST00000535282 3198 ntAPPRIS ALT1 TSL 5 BASIC6.59□□□□□ -1.35
CDK5RAP1Q96SZ6 NRG3-208ENST00000556918 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC6.59□□□□□ -1.35
CDK5RAP1Q96SZ6 TRIM38-201ENST00000357085 9413 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
CDK5RAP1Q96SZ6 OR4N5-202ENST00000641086 2187 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
CDK5RAP1Q96SZ6 ZNF813-201ENST00000396403 6151 ntAPPRIS P1 TSL 3 BASIC6.59□□□□□ -1.35
CDK5RAP1Q96SZ6 OR52N5-202ENST00000641181 2778 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
CDK5RAP1Q96SZ6 P2RY14-202ENST00000424796 1780 ntAPPRIS P1 TSL 2 BASIC6.59□□□□□ -1.35
CDK5RAP1Q96SZ6 CDH18-210ENST00000511273 2318 ntTSL 5 BASIC6.59□□□□□ -1.36
CDK5RAP1Q96SZ6 VEZF1-204ENST00000584396 2342 ntAPPRIS ALT2 TSL 5 BASIC6.59□□□□□ -1.36
CDK5RAP1Q96SZ6 SEC61A2-202ENST00000304267 2030 ntTSL 2 BASIC6.59□□□□□ -1.36
CDK5RAP1Q96SZ6 ARHGEF38-201ENST00000265154 1437 ntTSL 1 (best) BASIC6.59□□□□□ -1.36
CDK5RAP1Q96SZ6 AC107953.2-201ENST00000518362 1408 ntTSL 1 (best) BASIC6.59□□□□□ -1.36
CDK5RAP1Q96SZ6 IL1RL1-202ENST00000311734 3994 ntTSL 1 (best) BASIC6.59□□□□□ -1.36
CDK5RAP1Q96SZ6 ADAMTS9-AS2-203ENST00000481312 1970 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
CDK5RAP1Q96SZ6 PMS2-203ENST00000382321 1386 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
CDK5RAP1Q96SZ6 MED12L-206ENST00000474524 10744 ntAPPRIS P2 TSL 1 (best) BASIC6.58□□□□□ -1.36
CDK5RAP1Q96SZ6 XIAP-205ENST00000434753 8415 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
CDK5RAP1Q96SZ6 LINS1-214ENST00000561308 1612 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
CDK5RAP1Q96SZ6 GOLT1B-201ENST00000229314 3227 ntAPPRIS P2 TSL 1 (best) BASIC6.58□□□□□ -1.36
CDK5RAP1Q96SZ6 FGFR2-218ENST00000478859 3990 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
CDK5RAP1Q96SZ6 UBE3A-205ENST00000566215 3176 ntAPPRIS P3 TSL 1 (best) BASIC6.58□□□□□ -1.36
CDK5RAP1Q96SZ6 XRCC5-201ENST00000392132 3428 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
CDK5RAP1Q96SZ6 IL20-202ENST00000367098 1553 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
CDK5RAP1Q96SZ6 UGGT1-201ENST00000259253 10650 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
CDK5RAP1Q96SZ6 OR1D2-201ENST00000331459 939 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
CDK5RAP1Q96SZ6 RNA5SP279-201ENST00000365513 117 ntBASIC6.58□□□□□ -1.36
CDK5RAP1Q96SZ6 RNU6-648P-201ENST00000410190 107 ntBASIC6.58□□□□□ -1.36
CDK5RAP1Q96SZ6 AC107079.1-201ENST00000416509 669 ntTSL 2 BASIC6.58□□□□□ -1.36
CDK5RAP1Q96SZ6 AC073464.3-201ENST00000422564 712 ntBASIC6.58□□□□□ -1.36
CDK5RAP1Q96SZ6 PLA2G12AP2-201ENST00000424744 264 ntBASIC6.58□□□□□ -1.36
CDK5RAP1Q96SZ6 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC6.58□□□□□ -1.36
CDK5RAP1Q96SZ6 MTCO3P5-201ENST00000433620 714 ntBASIC6.58□□□□□ -1.36
CDK5RAP1Q96SZ6 LINC01133-202ENST00000443364 1266 ntTSL 5 BASIC6.58□□□□□ -1.36
CDK5RAP1Q96SZ6 AL157884.3-201ENST00000448273 1184 ntBASIC6.58□□□□□ -1.36
CDK5RAP1Q96SZ6 EXOSC3P1-201ENST00000448649 500 ntBASIC6.58□□□□□ -1.36
CDK5RAP1Q96SZ6 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC6.58□□□□□ -1.36
CDK5RAP1Q96SZ6 OR52I1-201ENST00000450052 1050 ntBASIC6.58□□□□□ -1.36
CDK5RAP1Q96SZ6 ZNF886P-201ENST00000450781 723 ntBASIC6.58□□□□□ -1.36
CDK5RAP1Q96SZ6 VPS25P1-201ENST00000455691 508 ntBASIC6.58□□□□□ -1.36
CDK5RAP1Q96SZ6 RARRES2P3-201ENST00000457739 473 ntBASIC6.58□□□□□ -1.36
CDK5RAP1Q96SZ6 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC6.58□□□□□ -1.36
CDK5RAP1Q96SZ6 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC6.58□□□□□ -1.36
CDK5RAP1Q96SZ6 AC068522.1-201ENST00000482895 345 ntBASIC6.58□□□□□ -1.36
CDK5RAP1Q96SZ6 RN7SL170P-201ENST00000487098 295 ntBASIC6.58□□□□□ -1.36
CDK5RAP1Q96SZ6 OR2A20P-203ENST00000498397 1268 ntBASIC6.58□□□□□ -1.36
CDK5RAP1Q96SZ6 MTND4LP2-201ENST00000502312 285 ntBASIC6.58□□□□□ -1.36
CDK5RAP1Q96SZ6 MTCO2P9-201ENST00000503214 694 ntBASIC6.58□□□□□ -1.36
CDK5RAP1Q96SZ6 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC6.58□□□□□ -1.36
CDK5RAP1Q96SZ6 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC6.58□□□□□ -1.36
CDK5RAP1Q96SZ6 MGC32805-204ENST00000509993 783 ntTSL 2 BASIC6.58□□□□□ -1.36
CDK5RAP1Q96SZ6 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC6.58□□□□□ -1.36
CDK5RAP1Q96SZ6 AC091819.1-201ENST00000518330 630 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
CDK5RAP1Q96SZ6 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC6.58□□□□□ -1.36
CDK5RAP1Q96SZ6 AC008601.1-201ENST00000519892 527 ntTSL 4 BASIC6.58□□□□□ -1.36
CDK5RAP1Q96SZ6 VTA1P2-201ENST00000520205 911 ntBASIC6.58□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 84.4 ms