Protein–RNA interactions for Protein: Q96ST3

SIN3A, Paired amphipathic helix protein Sin3a, humanhuman

Predictions only

Length 1,273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3AQ96ST3 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC8.12□□□□□ -1.11
SIN3AQ96ST3 CDH18-210ENST00000511273 2318 ntTSL 5 BASIC8.12□□□□□ -1.11
SIN3AQ96ST3 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC8.12□□□□□ -1.11
SIN3AQ96ST3 RN7SKP81-201ENST00000365603 331 ntBASIC8.12□□□□□ -1.11
SIN3AQ96ST3 AL390243.1-201ENST00000422038 708 ntTSL 2 BASIC8.12□□□□□ -1.11
SIN3AQ96ST3 CHEK2P5-201ENST00000423877 246 ntBASIC8.12□□□□□ -1.11
SIN3AQ96ST3 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC8.12□□□□□ -1.11
SIN3AQ96ST3 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC8.12□□□□□ -1.11
SIN3AQ96ST3 MINCR-206ENST00000524335 499 ntTSL 2 BASIC8.12□□□□□ -1.11
SIN3AQ96ST3 PIK3C3-207ENST00000587402 452 ntTSL 3 BASIC8.12□□□□□ -1.11
SIN3AQ96ST3 AC104695.2-201ENST00000605056 775 ntBASIC8.12□□□□□ -1.11
SIN3AQ96ST3 NANOGP3-201ENST00000605855 286 ntBASIC8.12□□□□□ -1.11
SIN3AQ96ST3 AC073218.2-202ENST00000605962 617 ntTSL 5 BASIC8.12□□□□□ -1.11
SIN3AQ96ST3 AC093388.1-201ENST00000609166 430 ntBASIC8.12□□□□□ -1.11
SIN3AQ96ST3 AC112493.1-201ENST00000609836 303 ntTSL 3 BASIC8.12□□□□□ -1.11
SIN3AQ96ST3 AC099654.11-201ENST00000638857 294 ntBASIC8.12□□□□□ -1.11
SIN3AQ96ST3 OTX2-AS1-201ENST00000534909 2428 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
SIN3AQ96ST3 ZNF24-201ENST00000261332 6307 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
SIN3AQ96ST3 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC8.12□□□□□ -1.11
SIN3AQ96ST3 PREPL-203ENST00000378520 2308 ntTSL 5 BASIC8.12□□□□□ -1.11
SIN3AQ96ST3 DMD-211ENST00000378707 7410 ntTSL 5 BASIC8.12□□□□□ -1.11
SIN3AQ96ST3 DCN-204ENST00000425043 1438 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
SIN3AQ96ST3 AC113146.2-201ENST00000560743 1961 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
SIN3AQ96ST3 OSER1-202ENST00000372970 1616 ntAPPRIS P1 TSL 3 BASIC8.11□□□□□ -1.11
SIN3AQ96ST3 PRLR-203ENST00000348262 1339 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
SIN3AQ96ST3 LGALS8-222ENST00000527974 1349 ntAPPRIS P4 TSL 5 BASIC8.11□□□□□ -1.11
SIN3AQ96ST3 MARK2P4-201ENST00000503381 2380 ntBASIC8.11□□□□□ -1.11
SIN3AQ96ST3 HBG1-201ENST00000330597 808 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
SIN3AQ96ST3 AL009179.1-201ENST00000406085 265 ntBASIC8.11□□□□□ -1.11
SIN3AQ96ST3 OR6D1P-201ENST00000436165 939 ntBASIC8.11□□□□□ -1.11
SIN3AQ96ST3 RN7SL284P-201ENST00000498823 275 ntBASIC8.11□□□□□ -1.11
SIN3AQ96ST3 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC8.11□□□□□ -1.11
SIN3AQ96ST3 FAM174B-202ENST00000553393 495 ntTSL 2 BASIC8.11□□□□□ -1.11
SIN3AQ96ST3 MORF4L1-205ENST00000558502 855 ntTSL 3 BASIC8.11□□□□□ -1.11
SIN3AQ96ST3 AC103808.4-201ENST00000577258 391 ntTSL 3 BASIC8.11□□□□□ -1.11
SIN3AQ96ST3 AC020909.2-201ENST00000595005 626 ntTSL 2 BASIC8.11□□□□□ -1.11
SIN3AQ96ST3 AL356580.1-201ENST00000604129 159 ntTSL 5 BASIC8.11□□□□□ -1.11
SIN3AQ96ST3 AL353729.2-201ENST00000605859 1249 ntBASIC8.11□□□□□ -1.11
SIN3AQ96ST3 AL359513.1-201ENST00000614364 557 ntBASIC8.11□□□□□ -1.11
SIN3AQ96ST3 MIR6729-201ENST00000618194 65 ntBASIC8.11□□□□□ -1.11
SIN3AQ96ST3 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC8.11□□□□□ -1.11
SIN3AQ96ST3 NAP1L1-227ENST00000618691 13505 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
SIN3AQ96ST3 AC144833.1-201ENST00000567953 4089 ntBASIC8.11□□□□□ -1.11
SIN3AQ96ST3 NALCN-201ENST00000251127 6818 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
SIN3AQ96ST3 AC013268.3-201ENST00000262716 2324 ntBASIC8.11□□□□□ -1.11
SIN3AQ96ST3 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
SIN3AQ96ST3 WDR64-201ENST00000366552 4371 ntAPPRIS P1 TSL 5 BASIC8.1□□□□□ -1.11
SIN3AQ96ST3 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC8.1□□□□□ -1.11
SIN3AQ96ST3 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC8.1□□□□□ -1.11
SIN3AQ96ST3 CD96-201ENST00000283285 4324 ntAPPRIS P4 TSL 1 (best) BASIC8.1□□□□□ -1.11
SIN3AQ96ST3 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
SIN3AQ96ST3 CCDC178-209ENST00000579947 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC8.1□□□□□ -1.11
SIN3AQ96ST3 FAM72B-201ENST00000355228 1773 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
SIN3AQ96ST3 NAV1-201ENST00000367295 11645 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
SIN3AQ96ST3 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC8.1□□□□□ -1.11
SIN3AQ96ST3 PDE4D-226ENST00000546160 7690 ntTSL 5 BASIC8.1□□□□□ -1.11
SIN3AQ96ST3 RNA5SP234-201ENST00000363916 119 ntBASIC8.1□□□□□ -1.11
SIN3AQ96ST3 ZSCAN12P1-201ENST00000406489 419 ntBASIC8.1□□□□□ -1.11
SIN3AQ96ST3 BCL11A-205ENST00000409351 756 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
SIN3AQ96ST3 RN7SKP286-201ENST00000410894 299 ntBASIC8.1□□□□□ -1.11
SIN3AQ96ST3 ITGA9-AS1-207ENST00000445429 532 ntTSL 5 BASIC8.1□□□□□ -1.11
SIN3AQ96ST3 AC016724.1-201ENST00000453215 421 ntBASIC8.1□□□□□ -1.11
SIN3AQ96ST3 AZGP1P2-201ENST00000454506 345 ntBASIC8.1□□□□□ -1.11
SIN3AQ96ST3 RN7SL717P-201ENST00000478343 297 ntBASIC8.1□□□□□ -1.11
SIN3AQ96ST3 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC8.1□□□□□ -1.11
SIN3AQ96ST3 ASB8-202ENST00000535055 657 ntTSL 2 BASIC8.1□□□□□ -1.11
SIN3AQ96ST3 HNRNPCP1-201ENST00000556181 766 ntBASIC8.1□□□□□ -1.11
SIN3AQ96ST3 AL049872.1-201ENST00000556323 322 ntBASIC8.1□□□□□ -1.11
SIN3AQ96ST3 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
SIN3AQ96ST3 ADAM3B-201ENST00000569937 840 ntBASIC8.1□□□□□ -1.11
SIN3AQ96ST3 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC8.1□□□□□ -1.11
SIN3AQ96ST3 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC8.1□□□□□ -1.11
SIN3AQ96ST3 FAM72A-208ENST00000607379 1139 ntBASIC8.1□□□□□ -1.11
SIN3AQ96ST3 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC8.1□□□□□ -1.11
SIN3AQ96ST3 MIR6862-1-201ENST00000613016 70 ntBASIC8.1□□□□□ -1.11
SIN3AQ96ST3 AC004477.3-201ENST00000614061 590 ntBASIC8.1□□□□□ -1.11
SIN3AQ96ST3 MIR6862-2-201ENST00000614755 70 ntBASIC8.1□□□□□ -1.11
SIN3AQ96ST3 AC015712.7-201ENST00000615211 635 ntBASIC8.1□□□□□ -1.11
SIN3AQ96ST3 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC8.1□□□□□ -1.11
SIN3AQ96ST3 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC8.1□□□□□ -1.11
SIN3AQ96ST3 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
SIN3AQ96ST3 AC027279.4-201ENST00000624371 2072 ntBASIC8.1□□□□□ -1.11
SIN3AQ96ST3 AC087516.1-201ENST00000561236 2428 ntBASIC8.1□□□□□ -1.11
SIN3AQ96ST3 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC8.09□□□□□ -1.11
SIN3AQ96ST3 NEK11-201ENST00000356918 1874 ntAPPRIS ALT2 TSL 5 BASIC8.09□□□□□ -1.11
SIN3AQ96ST3 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
SIN3AQ96ST3 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC8.09□□□□□ -1.11
SIN3AQ96ST3 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC8.09□□□□□ -1.11
SIN3AQ96ST3 GPC5-AS2-201ENST00000417589 401 ntTSL 3 BASIC8.09□□□□□ -1.11
SIN3AQ96ST3 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC8.09□□□□□ -1.11
SIN3AQ96ST3 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC8.09□□□□□ -1.11
SIN3AQ96ST3 AC099786.1-201ENST00000446238 670 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
SIN3AQ96ST3 LDHBP2-201ENST00000456969 1005 ntBASIC8.09□□□□□ -1.11
SIN3AQ96ST3 NXT1P1-201ENST00000458481 316 ntBASIC8.09□□□□□ -1.11
SIN3AQ96ST3 RPL35AP19-201ENST00000469425 329 ntBASIC8.09□□□□□ -1.11
SIN3AQ96ST3 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC8.09□□□□□ -1.11
SIN3AQ96ST3 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
SIN3AQ96ST3 SUMO2P19-201ENST00000518920 295 ntBASIC8.09□□□□□ -1.11
SIN3AQ96ST3 AC090103.1-201ENST00000520386 485 ntTSL 2 BASIC8.09□□□□□ -1.11
SIN3AQ96ST3 AC022404.1-201ENST00000555320 273 ntBASIC8.09□□□□□ -1.11
Retrieved 100 of 98,524 protein–RNA pairs in 74 ms