Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 AL021918.2-201ENST00000613415 194 ntBASIC4.82□□□□□ -1.64
RTN4IP1Q8WWV3 AC245014.3-201ENST00000618589 347 ntBASIC4.82□□□□□ -1.64
RTN4IP1Q8WWV3 AC073592.6-201ENST00000624271 415 ntBASIC4.82□□□□□ -1.64
RTN4IP1Q8WWV3 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC4.82□□□□□ -1.64
RTN4IP1Q8WWV3 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
RTN4IP1Q8WWV3 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
RTN4IP1Q8WWV3 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC4.82□□□□□ -1.64
RTN4IP1Q8WWV3 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC4.82□□□□□ -1.64
RTN4IP1Q8WWV3 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC4.82□□□□□ -1.64
RTN4IP1Q8WWV3 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC4.82□□□□□ -1.64
RTN4IP1Q8WWV3 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
RTN4IP1Q8WWV3 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
RTN4IP1Q8WWV3 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC4.82□□□□□ -1.64
RTN4IP1Q8WWV3 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
RTN4IP1Q8WWV3 UGT2B24P-201ENST00000514441 1597 ntBASIC4.82□□□□□ -1.64
RTN4IP1Q8WWV3 MUT-201ENST00000274813 3749 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
RTN4IP1Q8WWV3 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
RTN4IP1Q8WWV3 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
RTN4IP1Q8WWV3 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
RTN4IP1Q8WWV3 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC4.81□□□□□ -1.64
RTN4IP1Q8WWV3 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
RTN4IP1Q8WWV3 AC007938.2-201ENST00000604666 2634 ntBASIC4.81□□□□□ -1.64
RTN4IP1Q8WWV3 EEF1A1P33-201ENST00000554413 1362 ntBASIC4.81□□□□□ -1.64
RTN4IP1Q8WWV3 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
RTN4IP1Q8WWV3 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC4.81□□□□□ -1.64
RTN4IP1Q8WWV3 TAF9-205ENST00000506736 1331 ntAPPRIS P2 TSL 1 (best) BASIC4.81□□□□□ -1.64
RTN4IP1Q8WWV3 AL162726.3-201ENST00000637606 1301 ntTSL 5 BASIC4.81□□□□□ -1.64
RTN4IP1Q8WWV3 AL390726.6-201ENST00000637760 1654 ntTSL 5 BASIC4.81□□□□□ -1.64
RTN4IP1Q8WWV3 COX6B1P3-201ENST00000312310 260 ntBASIC4.81□□□□□ -1.64
RTN4IP1Q8WWV3 OR2L2-201ENST00000366479 1134 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
RTN4IP1Q8WWV3 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC4.81□□□□□ -1.64
RTN4IP1Q8WWV3 RNA5SP431-201ENST00000410312 120 ntBASIC4.81□□□□□ -1.64
RTN4IP1Q8WWV3 RPL35AP3-201ENST00000414680 288 ntBASIC4.81□□□□□ -1.64
RTN4IP1Q8WWV3 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC4.81□□□□□ -1.64
RTN4IP1Q8WWV3 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC4.81□□□□□ -1.64
RTN4IP1Q8WWV3 RPS12P17-201ENST00000438591 377 ntBASIC4.81□□□□□ -1.64
RTN4IP1Q8WWV3 ATP6V1E1P1-201ENST00000439215 681 ntBASIC4.81□□□□□ -1.64
RTN4IP1Q8WWV3 ATP5LP2-201ENST00000440646 311 ntBASIC4.81□□□□□ -1.64
RTN4IP1Q8WWV3 BMS1P10-201ENST00000443754 1120 ntBASIC4.81□□□□□ -1.64
RTN4IP1Q8WWV3 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
RTN4IP1Q8WWV3 AC079117.1-201ENST00000445178 1000 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
RTN4IP1Q8WWV3 CFL1P4-201ENST00000451536 498 ntBASIC4.81□□□□□ -1.64
RTN4IP1Q8WWV3 PPIAP27-201ENST00000453800 265 ntBASIC4.81□□□□□ -1.64
RTN4IP1Q8WWV3 AC023194.2-201ENST00000465398 406 ntBASIC4.81□□□□□ -1.64
RTN4IP1Q8WWV3 RN7SL269P-201ENST00000467795 305 ntBASIC4.81□□□□□ -1.64
RTN4IP1Q8WWV3 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC4.81□□□□□ -1.64
RTN4IP1Q8WWV3 RBBP4P1-201ENST00000502424 1276 ntBASIC4.81□□□□□ -1.64
RTN4IP1Q8WWV3 APOBEC3AP1-201ENST00000511396 287 ntBASIC4.81□□□□□ -1.64
RTN4IP1Q8WWV3 RN7SKP238-201ENST00000516483 249 ntBASIC4.81□□□□□ -1.64
RTN4IP1Q8WWV3 ASB8-202ENST00000535055 657 ntTSL 2 BASIC4.81□□□□□ -1.64
RTN4IP1Q8WWV3 ASB8-203ENST00000535988 679 ntTSL 2 BASIC4.81□□□□□ -1.64
RTN4IP1Q8WWV3 AC006512.2-201ENST00000543250 486 ntBASIC4.81□□□□□ -1.64
RTN4IP1Q8WWV3 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC4.81□□□□□ -1.64
RTN4IP1Q8WWV3 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC4.81□□□□□ -1.64
RTN4IP1Q8WWV3 MYL6-213ENST00000549017 502 ntTSL 3 BASIC4.81□□□□□ -1.64
RTN4IP1Q8WWV3 WDR61-205ENST00000558459 884 ntTSL 3 BASIC4.81□□□□□ -1.64
RTN4IP1Q8WWV3 AC073941.1-201ENST00000559148 539 ntTSL 4 BASIC4.81□□□□□ -1.64
RTN4IP1Q8WWV3 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC4.81□□□□□ -1.64
RTN4IP1Q8WWV3 GARSP1-201ENST00000570895 719 ntBASIC4.81□□□□□ -1.64
RTN4IP1Q8WWV3 AC005244.1-201ENST00000582566 339 ntBASIC4.81□□□□□ -1.64
RTN4IP1Q8WWV3 AC008507.3-201ENST00000585753 472 ntBASIC4.81□□□□□ -1.64
RTN4IP1Q8WWV3 AC090236.2-201ENST00000587933 1101 ntBASIC4.81□□□□□ -1.64
RTN4IP1Q8WWV3 AC010320.2-201ENST00000593857 551 ntTSL 4 BASIC4.81□□□□□ -1.64
RTN4IP1Q8WWV3 AL049840.6-201ENST00000604583 345 ntBASIC4.81□□□□□ -1.64
RTN4IP1Q8WWV3 AC138035.1-202ENST00000604669 683 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
RTN4IP1Q8WWV3 MIR7109-201ENST00000613748 65 ntBASIC4.81□□□□□ -1.64
RTN4IP1Q8WWV3 AL136228.1-201ENST00000622221 319 ntBASIC4.81□□□□□ -1.64
RTN4IP1Q8WWV3 GPR89A-213ENST00000534502 1644 ntTSL 2 BASIC4.81□□□□□ -1.64
RTN4IP1Q8WWV3 CASC19-238ENST00000641523 1558 ntBASIC4.81□□□□□ -1.64
RTN4IP1Q8WWV3 PSG10P-201ENST00000501199 1500 ntBASIC4.81□□□□□ -1.64
RTN4IP1Q8WWV3 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC4.81□□□□□ -1.64
RTN4IP1Q8WWV3 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
RTN4IP1Q8WWV3 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
RTN4IP1Q8WWV3 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC4.81□□□□□ -1.64
RTN4IP1Q8WWV3 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC4.81□□□□□ -1.64
RTN4IP1Q8WWV3 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC4.8□□□□□ -1.64
RTN4IP1Q8WWV3 RASSF8-201ENST00000282884 1994 ntAPPRIS P1 TSL 2 BASIC4.8□□□□□ -1.64
RTN4IP1Q8WWV3 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
RTN4IP1Q8WWV3 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
RTN4IP1Q8WWV3 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC4.8□□□□□ -1.64
RTN4IP1Q8WWV3 GJA9-202ENST00000360786 1901 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
RTN4IP1Q8WWV3 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC4.8□□□□□ -1.64
RTN4IP1Q8WWV3 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
RTN4IP1Q8WWV3 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
RTN4IP1Q8WWV3 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC4.8□□□□□ -1.64
RTN4IP1Q8WWV3 SELENOWP1-201ENST00000322792 252 ntBASIC4.8□□□□□ -1.64
RTN4IP1Q8WWV3 WFDC8-202ENST00000357199 1268 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
RTN4IP1Q8WWV3 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
RTN4IP1Q8WWV3 KRTAP3-1-201ENST00000391588 594 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
RTN4IP1Q8WWV3 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC4.8□□□□□ -1.64
RTN4IP1Q8WWV3 AC079809.1-201ENST00000415468 276 ntBASIC4.8□□□□□ -1.64
RTN4IP1Q8WWV3 AC078883.1-203ENST00000416080 654 ntTSL 3 BASIC4.8□□□□□ -1.64
RTN4IP1Q8WWV3 LINC02246-202ENST00000418954 717 ntTSL 2 BASIC4.8□□□□□ -1.64
RTN4IP1Q8WWV3 RPS4XP5-201ENST00000419038 768 ntBASIC4.8□□□□□ -1.64
RTN4IP1Q8WWV3 TRGV5P-201ENST00000419915 354 ntBASIC4.8□□□□□ -1.64
RTN4IP1Q8WWV3 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC4.8□□□□□ -1.64
RTN4IP1Q8WWV3 REREP1Y-201ENST00000422655 198 ntBASIC4.8□□□□□ -1.64
RTN4IP1Q8WWV3 KIF4CP-201ENST00000422742 1279 ntBASIC4.8□□□□□ -1.64
RTN4IP1Q8WWV3 AL669841.1-201ENST00000425723 558 ntTSL 2 BASIC4.8□□□□□ -1.64
RTN4IP1Q8WWV3 AP000295.1-201ENST00000433395 1000 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 149.1 ms