Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 MIR193BHG-214ENST00000641765 509 ntBASIC5.33□□□□□ -1.56
C9orf40Q8IXQ3 PAK3-202ENST00000360648 2241 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
C9orf40Q8IXQ3 AC037459.2-201ENST00000514980 4076 ntTSL 2 BASIC5.33□□□□□ -1.56
C9orf40Q8IXQ3 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC5.33□□□□□ -1.56
C9orf40Q8IXQ3 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
C9orf40Q8IXQ3 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC5.33□□□□□ -1.56
C9orf40Q8IXQ3 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC5.33□□□□□ -1.56
C9orf40Q8IXQ3 AC092958.1-201ENST00000467198 2569 ntTSL 2 BASIC5.33□□□□□ -1.56
C9orf40Q8IXQ3 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
C9orf40Q8IXQ3 CDK14-206ENST00000436577 4787 ntTSL 2 BASIC5.33□□□□□ -1.56
C9orf40Q8IXQ3 NSF-206ENST00000575068 2667 ntTSL 2 BASIC5.32□□□□□ -1.56
C9orf40Q8IXQ3 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC5.32□□□□□ -1.56
C9orf40Q8IXQ3 IFRD1-216ENST00000535603 3397 ntTSL 2 BASIC5.32□□□□□ -1.56
C9orf40Q8IXQ3 NCOA7-201ENST00000229634 2998 ntAPPRIS ALT2 TSL 2 BASIC5.32□□□□□ -1.56
C9orf40Q8IXQ3 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
C9orf40Q8IXQ3 GTF2IP4-201ENST00000453092 2054 ntBASIC5.32□□□□□ -1.56
C9orf40Q8IXQ3 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
C9orf40Q8IXQ3 CDKL5-205ENST00000623535 12533 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
C9orf40Q8IXQ3 PUM2-202ENST00000338086 6112 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
C9orf40Q8IXQ3 EMC2-201ENST00000220853 1243 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
C9orf40Q8IXQ3 RLN1-201ENST00000223862 967 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
C9orf40Q8IXQ3 SNORA64.1-201ENST00000362600 132 ntBASIC5.32□□□□□ -1.56
C9orf40Q8IXQ3 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
C9orf40Q8IXQ3 RNA5SP91-201ENST00000390902 119 ntBASIC5.32□□□□□ -1.56
C9orf40Q8IXQ3 CDY17P-201ENST00000414121 1282 ntBASIC5.32□□□□□ -1.56
C9orf40Q8IXQ3 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC5.32□□□□□ -1.56
C9orf40Q8IXQ3 AC009506.2-201ENST00000420635 840 ntBASIC5.32□□□□□ -1.56
C9orf40Q8IXQ3 CRIP1P1-201ENST00000427567 185 ntBASIC5.32□□□□□ -1.56
C9orf40Q8IXQ3 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC5.32□□□□□ -1.56
C9orf40Q8IXQ3 RPL31P15-201ENST00000449770 338 ntBASIC5.32□□□□□ -1.56
C9orf40Q8IXQ3 AL358876.1-201ENST00000453364 1075 ntBASIC5.32□□□□□ -1.56
C9orf40Q8IXQ3 RN7SL570P-201ENST00000484405 292 ntBASIC5.32□□□□□ -1.56
C9orf40Q8IXQ3 AC073610.1-201ENST00000489971 396 ntBASIC5.32□□□□□ -1.56
C9orf40Q8IXQ3 OR7E157P-201ENST00000494376 911 ntBASIC5.32□□□□□ -1.56
C9orf40Q8IXQ3 AC010445.1-201ENST00000507674 440 ntTSL 5 BASIC5.32□□□□□ -1.56
C9orf40Q8IXQ3 AC074255.1-201ENST00000511259 501 ntBASIC5.32□□□□□ -1.56
C9orf40Q8IXQ3 HMGB1P42-201ENST00000532126 553 ntBASIC5.32□□□□□ -1.56
C9orf40Q8IXQ3 GPRC5D-AS1-205ENST00000540198 404 ntTSL 5 BASIC5.32□□□□□ -1.56
C9orf40Q8IXQ3 LINC02327-205ENST00000550990 472 ntTSL 3 BASIC5.32□□□□□ -1.56
C9orf40Q8IXQ3 AC135626.1-201ENST00000556983 435 ntBASIC5.32□□□□□ -1.56
C9orf40Q8IXQ3 AL163952.1-202ENST00000569625 600 ntBASIC5.32□□□□□ -1.56
C9orf40Q8IXQ3 MRO-208ENST00000588444 866 ntTSL 3 BASIC5.32□□□□□ -1.56
C9orf40Q8IXQ3 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC5.32□□□□□ -1.56
C9orf40Q8IXQ3 ZNF208-204ENST00000599916 740 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
C9orf40Q8IXQ3 PCA3_2.1-201ENST00000612507 409 ntBASIC5.32□□□□□ -1.56
C9orf40Q8IXQ3 AC103703.1-201ENST00000634783 663 ntBASIC5.32□□□□□ -1.56
C9orf40Q8IXQ3 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC5.32□□□□□ -1.56
C9orf40Q8IXQ3 ZC3H14-201ENST00000251038 18281 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
C9orf40Q8IXQ3 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
C9orf40Q8IXQ3 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC5.32□□□□□ -1.56
C9orf40Q8IXQ3 AL591135.1-201ENST00000401578 5914 ntBASIC5.32□□□□□ -1.56
C9orf40Q8IXQ3 ZNF26-202ENST00000534834 4853 ntAPPRIS ALT2 TSL 2 BASIC5.32□□□□□ -1.56
C9orf40Q8IXQ3 SMCO1-201ENST00000397537 1812 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
C9orf40Q8IXQ3 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC5.32□□□□□ -1.56
C9orf40Q8IXQ3 GRIA3-207ENST00000620443 4943 ntAPPRIS ALT1 TSL 1 (best) BASIC5.31□□□□□ -1.56
C9orf40Q8IXQ3 PARD3B-214ENST00000622699 7442 ntTSL 5 BASIC5.31□□□□□ -1.56
C9orf40Q8IXQ3 FAM205A-201ENST00000378788 4225 ntAPPRIS P1 TSL 2 BASIC5.31□□□□□ -1.56
C9orf40Q8IXQ3 ENTPD1-201ENST00000371205 2035 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
C9orf40Q8IXQ3 HECW2-201ENST00000260983 11809 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
C9orf40Q8IXQ3 AL355488.2-201ENST00000609909 2850 ntBASIC5.31□□□□□ -1.56
C9orf40Q8IXQ3 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC5.31□□□□□ -1.56
C9orf40Q8IXQ3 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC5.31□□□□□ -1.56
C9orf40Q8IXQ3 AL355306.2-206ENST00000635233 1903 ntTSL 5 BASIC5.31□□□□□ -1.56
C9orf40Q8IXQ3 CACNA1E-204ENST00000367567 14757 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
C9orf40Q8IXQ3 CHD8-202ENST00000430710 7420 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
C9orf40Q8IXQ3 OPRM1-217ENST00000522236 2459 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
C9orf40Q8IXQ3 OR7G2-201ENST00000305456 1038 ntAPPRIS P2 BASIC5.31□□□□□ -1.56
C9orf40Q8IXQ3 TMSB4XP4-201ENST00000323496 618 ntBASIC5.31□□□□□ -1.56
C9orf40Q8IXQ3 SNTN-201ENST00000343837 1090 ntAPPRIS P1 TSL 2 BASIC5.31□□□□□ -1.56
C9orf40Q8IXQ3 HSPB11-202ENST00000371376 765 ntTSL 3 BASIC5.31□□□□□ -1.56
C9orf40Q8IXQ3 TRAV25-201ENST00000390454 403 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
C9orf40Q8IXQ3 KCNJ13-202ENST00000409779 1099 ntTSL 2 BASIC5.31□□□□□ -1.56
C9orf40Q8IXQ3 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC5.31□□□□□ -1.56
C9orf40Q8IXQ3 AC104843.2-201ENST00000427666 297 ntBASIC5.31□□□□□ -1.56
C9orf40Q8IXQ3 LINC01798-204ENST00000433396 682 ntTSL 3 BASIC5.31□□□□□ -1.56
C9orf40Q8IXQ3 AL139280.1-201ENST00000436340 463 ntTSL 3 BASIC5.31□□□□□ -1.56
C9orf40Q8IXQ3 AL590399.4-201ENST00000436561 601 ntBASIC5.31□□□□□ -1.56
C9orf40Q8IXQ3 RNF219-AS1-202ENST00000444769 590 ntTSL 4 BASIC5.31□□□□□ -1.56
C9orf40Q8IXQ3 RPL36AP39-201ENST00000445859 318 ntBASIC5.31□□□□□ -1.56
C9orf40Q8IXQ3 HMGN1P36-201ENST00000446623 298 ntBASIC5.31□□□□□ -1.56
C9orf40Q8IXQ3 snoU13.29-201ENST00000459370 104 ntBASIC5.31□□□□□ -1.56
C9orf40Q8IXQ3 MRE11P1-201ENST00000464884 2127 ntBASIC5.31□□□□□ -1.56
C9orf40Q8IXQ3 RABGAP1L-214ENST00000478442 648 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
C9orf40Q8IXQ3 PPIAP19-201ENST00000486414 492 ntBASIC5.31□□□□□ -1.56
C9orf40Q8IXQ3 LINC00518-204ENST00000491317 1228 ntTSL 2 BASIC5.31□□□□□ -1.56
C9orf40Q8IXQ3 DUTP1-201ENST00000493631 470 ntBASIC5.31□□□□□ -1.56
C9orf40Q8IXQ3 CRNDE-201ENST00000501177 614 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
C9orf40Q8IXQ3 AC008448.1-201ENST00000505109 584 ntTSL 5 BASIC5.31□□□□□ -1.56
C9orf40Q8IXQ3 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC5.31□□□□□ -1.56
C9orf40Q8IXQ3 MTATP6P1-201ENST00000514057 681 ntBASIC5.31□□□□□ -1.56
C9orf40Q8IXQ3 CYCSP22-201ENST00000517555 339 ntBASIC5.31□□□□□ -1.56
C9orf40Q8IXQ3 MRPS16P1-201ENST00000523462 412 ntBASIC5.31□□□□□ -1.56
C9orf40Q8IXQ3 CCDC60-203ENST00000536742 886 ntAPPRIS ALT2 TSL 2 BASIC5.31□□□□□ -1.56
C9orf40Q8IXQ3 AC126615.2-201ENST00000553003 515 ntBASIC5.31□□□□□ -1.56
C9orf40Q8IXQ3 SLC7A7-210ENST00000554517 1158 ntTSL 5 BASIC5.31□□□□□ -1.56
C9orf40Q8IXQ3 NPM1P42-201ENST00000560329 862 ntBASIC5.31□□□□□ -1.56
C9orf40Q8IXQ3 AC105411.1-203ENST00000568819 601 ntTSL 5 BASIC5.31□□□□□ -1.56
C9orf40Q8IXQ3 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC5.31□□□□□ -1.56
C9orf40Q8IXQ3 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC5.31□□□□□ -1.56
C9orf40Q8IXQ3 AL354733.2-210ENST00000586211 647 ntTSL 5 BASIC5.31□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 84 ms