Protein–RNA interactions for Protein: Q8IVW4

CDKL3, Cyclin-dependent kinase-like 3, humanhuman

Predicted RBP Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3Q8IVW4 AC069208.1-201ENST00000540811 676 ntTSL 4 BASIC5.88□□□□□ -1.47
CDKL3Q8IVW4 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC5.88□□□□□ -1.47
CDKL3Q8IVW4 AC079905.1-201ENST00000549280 475 ntBASIC5.88□□□□□ -1.47
CDKL3Q8IVW4 AC096996.1-201ENST00000563813 325 ntBASIC5.88□□□□□ -1.47
CDKL3Q8IVW4 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC5.88□□□□□ -1.47
CDKL3Q8IVW4 MIR6889-201ENST00000613185 59 ntBASIC5.88□□□□□ -1.47
CDKL3Q8IVW4 AC090607.5-201ENST00000615692 224 ntBASIC5.88□□□□□ -1.47
CDKL3Q8IVW4 AL031665.2-201ENST00000620712 209 ntTSL 3 BASIC5.88□□□□□ -1.47
CDKL3Q8IVW4 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC5.88□□□□□ -1.47
CDKL3Q8IVW4 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC5.88□□□□□ -1.47
CDKL3Q8IVW4 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
CDKL3Q8IVW4 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
CDKL3Q8IVW4 UGT2B24P-201ENST00000514441 1597 ntBASIC5.88□□□□□ -1.47
CDKL3Q8IVW4 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
CDKL3Q8IVW4 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC5.88□□□□□ -1.47
CDKL3Q8IVW4 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC5.88□□□□□ -1.47
CDKL3Q8IVW4 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
CDKL3Q8IVW4 AC027279.4-201ENST00000624371 2072 ntBASIC5.87□□□□□ -1.47
CDKL3Q8IVW4 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
CDKL3Q8IVW4 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
CDKL3Q8IVW4 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC5.87□□□□□ -1.47
CDKL3Q8IVW4 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
CDKL3Q8IVW4 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
CDKL3Q8IVW4 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC5.87□□□□□ -1.47
CDKL3Q8IVW4 SCGB3A2-201ENST00000296694 515 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
CDKL3Q8IVW4 RN7SKP185-201ENST00000362813 326 ntBASIC5.87□□□□□ -1.47
CDKL3Q8IVW4 COMMD6-204ENST00000377619 594 ntTSL 2 BASIC5.87□□□□□ -1.47
CDKL3Q8IVW4 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
CDKL3Q8IVW4 KRTAP3-1-201ENST00000391588 594 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
CDKL3Q8IVW4 RNASE11-202ENST00000398009 1034 ntAPPRIS P2 TSL 5 BASIC5.87□□□□□ -1.47
CDKL3Q8IVW4 MRPL53P1-201ENST00000414323 319 ntBASIC5.87□□□□□ -1.47
CDKL3Q8IVW4 AK4P4-201ENST00000419465 646 ntBASIC5.87□□□□□ -1.47
CDKL3Q8IVW4 AC138761.5-201ENST00000433967 325 ntBASIC5.87□□□□□ -1.47
CDKL3Q8IVW4 GAPDHP48-201ENST00000436626 961 ntBASIC5.87□□□□□ -1.47
CDKL3Q8IVW4 AL161722.1-201ENST00000446972 1032 ntBASIC5.87□□□□□ -1.47
CDKL3Q8IVW4 MOB4-207ENST00000448447 1021 ntTSL 2 BASIC5.87□□□□□ -1.47
CDKL3Q8IVW4 RPS23P9-201ENST00000448848 438 ntBASIC5.87□□□□□ -1.47
CDKL3Q8IVW4 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC5.87□□□□□ -1.47
CDKL3Q8IVW4 SNORD125-201ENST00000459538 96 ntBASIC5.87□□□□□ -1.47
CDKL3Q8IVW4 SCGB3A2-202ENST00000504320 440 ntTSL 3 BASIC5.87□□□□□ -1.47
CDKL3Q8IVW4 AC105919.1-201ENST00000507203 393 ntTSL 3 BASIC5.87□□□□□ -1.47
CDKL3Q8IVW4 AC010181.1-202ENST00000509191 798 ntTSL 3 BASIC5.87□□□□□ -1.47
CDKL3Q8IVW4 TPT1-AS1-207ENST00000520310 563 ntTSL 5 BASIC5.87□□□□□ -1.47
CDKL3Q8IVW4 IGLV3-30-201ENST00000524362 298 ntBASIC5.87□□□□□ -1.47
CDKL3Q8IVW4 TMEM126B-211ENST00000534341 1273 ntTSL 2 BASIC5.87□□□□□ -1.47
CDKL3Q8IVW4 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC5.87□□□□□ -1.47
CDKL3Q8IVW4 AC137627.1-201ENST00000545761 289 ntBASIC5.87□□□□□ -1.47
CDKL3Q8IVW4 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC5.87□□□□□ -1.47
CDKL3Q8IVW4 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC5.87□□□□□ -1.47
CDKL3Q8IVW4 AC073592.6-201ENST00000624271 415 ntBASIC5.87□□□□□ -1.47
CDKL3Q8IVW4 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC5.87□□□□□ -1.47
CDKL3Q8IVW4 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC5.87□□□□□ -1.47
CDKL3Q8IVW4 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC5.87□□□□□ -1.47
CDKL3Q8IVW4 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
CDKL3Q8IVW4 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC5.87□□□□□ -1.47
CDKL3Q8IVW4 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
CDKL3Q8IVW4 AP002001.1-201ENST00000526101 1759 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
CDKL3Q8IVW4 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC5.87□□□□□ -1.47
CDKL3Q8IVW4 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
CDKL3Q8IVW4 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC5.87□□□□□ -1.47
CDKL3Q8IVW4 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
CDKL3Q8IVW4 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
CDKL3Q8IVW4 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
CDKL3Q8IVW4 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC5.86□□□□□ -1.47
CDKL3Q8IVW4 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC5.86□□□□□ -1.47
CDKL3Q8IVW4 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC5.86□□□□□ -1.47
CDKL3Q8IVW4 GTDC1-207ENST00000409298 2209 ntTSL 5 BASIC5.86□□□□□ -1.47
CDKL3Q8IVW4 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
CDKL3Q8IVW4 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC5.86□□□□□ -1.47
CDKL3Q8IVW4 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
CDKL3Q8IVW4 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
CDKL3Q8IVW4 RALYL-211ENST00000523850 1684 ntTSL 2 BASIC5.86□□□□□ -1.47
CDKL3Q8IVW4 WDR95P-201ENST00000425638 1542 ntBASIC5.86□□□□□ -1.47
CDKL3Q8IVW4 AC099654.3-201ENST00000447087 1546 ntBASIC5.86□□□□□ -1.47
CDKL3Q8IVW4 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC5.86□□□□□ -1.47
CDKL3Q8IVW4 RNA5SP273-201ENST00000362484 113 ntBASIC5.86□□□□□ -1.47
CDKL3Q8IVW4 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC5.86□□□□□ -1.47
CDKL3Q8IVW4 RNF10P1-201ENST00000418589 369 ntBASIC5.86□□□□□ -1.47
CDKL3Q8IVW4 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC5.86□□□□□ -1.47
CDKL3Q8IVW4 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC5.86□□□□□ -1.47
CDKL3Q8IVW4 HSPE1P27-201ENST00000430808 296 ntBASIC5.86□□□□□ -1.47
CDKL3Q8IVW4 NDUFS5P5-201ENST00000437256 321 ntBASIC5.86□□□□□ -1.47
CDKL3Q8IVW4 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC5.86□□□□□ -1.47
CDKL3Q8IVW4 AL158850.1-201ENST00000441249 914 ntTSL 3 BASIC5.86□□□□□ -1.47
CDKL3Q8IVW4 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC5.86□□□□□ -1.47
CDKL3Q8IVW4 GAS5-218ENST00000448718 565 ntTSL 2 BASIC5.86□□□□□ -1.47
CDKL3Q8IVW4 OR52E7P-201ENST00000452394 933 ntBASIC5.86□□□□□ -1.47
CDKL3Q8IVW4 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC5.86□□□□□ -1.47
CDKL3Q8IVW4 AC025458.1-201ENST00000506046 166 ntBASIC5.86□□□□□ -1.47
CDKL3Q8IVW4 AC027343.2-201ENST00000513219 343 ntTSL 3 BASIC5.86□□□□□ -1.47
CDKL3Q8IVW4 AC097173.2-201ENST00000518701 474 ntTSL 3 BASIC5.86□□□□□ -1.47
CDKL3Q8IVW4 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC5.86□□□□□ -1.47
CDKL3Q8IVW4 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC5.86□□□□□ -1.47
CDKL3Q8IVW4 AC002056.2-201ENST00000532913 284 ntTSL 5 BASIC5.86□□□□□ -1.47
CDKL3Q8IVW4 VPS29-210ENST00000552130 1057 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
CDKL3Q8IVW4 AL133371.1-201ENST00000555481 764 ntTSL 2 BASIC5.86□□□□□ -1.47
CDKL3Q8IVW4 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC5.86□□□□□ -1.47
CDKL3Q8IVW4 AC009087.1-201ENST00000561827 369 ntTSL 3 BASIC5.86□□□□□ -1.47
CDKL3Q8IVW4 AGGF1P7-201ENST00000562369 913 ntBASIC5.86□□□□□ -1.47
CDKL3Q8IVW4 AC099850.2-201ENST00000577660 557 ntAPPRIS P1 TSL 3 BASIC5.86□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 106.3 ms