Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 MIR3154-201ENST00000577829 84 ntBASIC5.82□□□□□ -1.48
ZNF549Q6P9A3 AC005244.1-201ENST00000582566 339 ntBASIC5.82□□□□□ -1.48
ZNF549Q6P9A3 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC5.82□□□□□ -1.48
ZNF549Q6P9A3 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC5.82□□□□□ -1.48
ZNF549Q6P9A3 AC009237.12-201ENST00000604755 742 ntBASIC5.82□□□□□ -1.48
ZNF549Q6P9A3 AC145423.1-201ENST00000605712 336 ntBASIC5.82□□□□□ -1.48
ZNF549Q6P9A3 AP001437.1-201ENST00000608783 456 ntBASIC5.82□□□□□ -1.48
ZNF549Q6P9A3 AC093388.1-201ENST00000609166 430 ntBASIC5.82□□□□□ -1.48
ZNF549Q6P9A3 AC104763.3-201ENST00000613765 618 ntBASIC5.82□□□□□ -1.48
ZNF549Q6P9A3 AC079298.3-201ENST00000624941 977 ntTSL 3 BASIC5.82□□□□□ -1.48
ZNF549Q6P9A3 FP236241.1-206ENST00000625005 987 ntTSL 5 BASIC5.82□□□□□ -1.48
ZNF549Q6P9A3 MAPKBP1-217ENST00000627631 210 ntTSL 5 BASIC5.82□□□□□ -1.48
ZNF549Q6P9A3 AC008993.2-201ENST00000631744 806 ntBASIC5.82□□□□□ -1.48
ZNF549Q6P9A3 CASC15-208ENST00000636388 1174 ntTSL 5 BASIC5.82□□□□□ -1.48
ZNF549Q6P9A3 CASC19-274ENST00000642018 970 ntBASIC5.82□□□□□ -1.48
ZNF549Q6P9A3 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
ZNF549Q6P9A3 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
ZNF549Q6P9A3 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
ZNF549Q6P9A3 QRSL1P1-201ENST00000400977 1540 ntBASIC5.82□□□□□ -1.48
ZNF549Q6P9A3 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
ZNF549Q6P9A3 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
ZNF549Q6P9A3 CLEC12B-202ENST00000396502 3029 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
ZNF549Q6P9A3 ZMYND11-202ENST00000381584 2709 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
ZNF549Q6P9A3 NPY5R-202ENST00000506953 1418 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
ZNF549Q6P9A3 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC5.82□□□□□ -1.48
ZNF549Q6P9A3 PSG4-201ENST00000244295 1629 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
ZNF549Q6P9A3 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
ZNF549Q6P9A3 ANGPTL5-201ENST00000334289 2368 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
ZNF549Q6P9A3 CTDSPL2-204ENST00000558966 1895 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
ZNF549Q6P9A3 AF287957.1-201ENST00000607368 1595 ntBASIC5.81□□□□□ -1.48
ZNF549Q6P9A3 FBXL21-201ENST00000297158 1305 ntBASIC5.81□□□□□ -1.48
ZNF549Q6P9A3 ARPP21-202ENST00000396481 1304 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
ZNF549Q6P9A3 AL136520.1-201ENST00000600311 1322 ntBASIC5.81□□□□□ -1.48
ZNF549Q6P9A3 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC5.81□□□□□ -1.48
ZNF549Q6P9A3 AL592430.1-202ENST00000414383 1546 ntTSL 3 BASIC5.81□□□□□ -1.48
ZNF549Q6P9A3 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC5.81□□□□□ -1.48
ZNF549Q6P9A3 HGF-205ENST00000423064 1990 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
ZNF549Q6P9A3 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
ZNF549Q6P9A3 HBG1-201ENST00000330597 808 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
ZNF549Q6P9A3 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC5.81□□□□□ -1.48
ZNF549Q6P9A3 RNA5SP431-201ENST00000410312 120 ntBASIC5.81□□□□□ -1.48
ZNF549Q6P9A3 AL049812.3-201ENST00000412348 417 ntTSL 3 BASIC5.81□□□□□ -1.48
ZNF549Q6P9A3 AC011752.1-203ENST00000417609 582 ntTSL 2 BASIC5.81□□□□□ -1.48
ZNF549Q6P9A3 AL391704.3-201ENST00000425365 831 ntTSL 3 BASIC5.81□□□□□ -1.48
ZNF549Q6P9A3 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC5.81□□□□□ -1.48
ZNF549Q6P9A3 AL021940.1-201ENST00000454271 677 ntTSL 2 BASIC5.81□□□□□ -1.48
ZNF549Q6P9A3 CST12P-201ENST00000457644 362 ntBASIC5.81□□□□□ -1.48
ZNF549Q6P9A3 NDUFB2-210ENST00000475276 539 ntTSL 4 BASIC5.81□□□□□ -1.48
ZNF549Q6P9A3 AC093719.1-201ENST00000480427 441 ntBASIC5.81□□□□□ -1.48
ZNF549Q6P9A3 AC006539.1-201ENST00000481419 501 ntBASIC5.81□□□□□ -1.48
ZNF549Q6P9A3 AC108729.1-201ENST00000487812 947 ntBASIC5.81□□□□□ -1.48
ZNF549Q6P9A3 VPS26A-206ENST00000489794 928 ntTSL 3 BASIC5.81□□□□□ -1.48
ZNF549Q6P9A3 AC090204.1-202ENST00000500843 737 ntTSL 5 BASIC5.81□□□□□ -1.48
ZNF549Q6P9A3 AC020551.1-201ENST00000512036 539 ntTSL 3 BASIC5.81□□□□□ -1.48
ZNF549Q6P9A3 LINC02506-201ENST00000513211 734 ntTSL 3 BASIC5.81□□□□□ -1.48
ZNF549Q6P9A3 AC022441.2-201ENST00000514113 382 ntTSL 3 BASIC5.81□□□□□ -1.48
ZNF549Q6P9A3 AP003102.1-201ENST00000525638 661 ntBASIC5.81□□□□□ -1.48
ZNF549Q6P9A3 AP000593.3-201ENST00000546065 578 ntTSL 2 BASIC5.81□□□□□ -1.48
ZNF549Q6P9A3 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC5.81□□□□□ -1.48
ZNF549Q6P9A3 AL845552.1-201ENST00000556820 323 ntBASIC5.81□□□□□ -1.48
ZNF549Q6P9A3 AC091078.2-201ENST00000557145 559 ntBASIC5.81□□□□□ -1.48
ZNF549Q6P9A3 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC5.81□□□□□ -1.48
ZNF549Q6P9A3 LINC02193-202ENST00000566864 719 ntTSL 3 BASIC5.81□□□□□ -1.48
ZNF549Q6P9A3 LINC2194-201ENST00000567127 454 ntTSL 3 BASIC5.81□□□□□ -1.48
ZNF549Q6P9A3 AL713998.2-201ENST00000604538 1198 ntBASIC5.81□□□□□ -1.48
ZNF549Q6P9A3 AC108673.3-201ENST00000609183 335 ntBASIC5.81□□□□□ -1.48
ZNF549Q6P9A3 AL391834.1-201ENST00000609609 560 ntBASIC5.81□□□□□ -1.48
ZNF549Q6P9A3 SSX4B-202ENST00000619890 1092 ntTSL 5 BASIC5.81□□□□□ -1.48
ZNF549Q6P9A3 SSX4-202ENST00000620320 1092 ntTSL 5 BASIC5.81□□□□□ -1.48
ZNF549Q6P9A3 AC091046.2-201ENST00000620775 665 ntBASIC5.81□□□□□ -1.48
ZNF549Q6P9A3 MIR6806-201ENST00000622141 64 ntBASIC5.81□□□□□ -1.48
ZNF549Q6P9A3 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC5.81□□□□□ -1.48
ZNF549Q6P9A3 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
ZNF549Q6P9A3 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
ZNF549Q6P9A3 MFSD8-219ENST00000641228 2559 ntBASIC5.81□□□□□ -1.48
ZNF549Q6P9A3 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
ZNF549Q6P9A3 AC093225.1-201ENST00000506867 1408 ntBASIC5.81□□□□□ -1.48
ZNF549Q6P9A3 SATL1-202ENST00000509231 2224 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
ZNF549Q6P9A3 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
ZNF549Q6P9A3 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC5.8□□□□□ -1.48
ZNF549Q6P9A3 AC011933.2-201ENST00000578539 2790 ntBASIC5.8□□□□□ -1.48
ZNF549Q6P9A3 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
ZNF549Q6P9A3 CDH7-201ENST00000323011 2728 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
ZNF549Q6P9A3 NBPF9-203ENST00000610300 2930 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
ZNF549Q6P9A3 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC5.8□□□□□ -1.48
ZNF549Q6P9A3 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC5.8□□□□□ -1.48
ZNF549Q6P9A3 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC5.8□□□□□ -1.48
ZNF549Q6P9A3 OR8U1-201ENST00000302270 930 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
ZNF549Q6P9A3 U3.10-201ENST00000364459 214 ntBASIC5.8□□□□□ -1.48
ZNF549Q6P9A3 OR2B3-201ENST00000377173 1106 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
ZNF549Q6P9A3 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
ZNF549Q6P9A3 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
ZNF549Q6P9A3 RPL7P58-201ENST00000402913 758 ntBASIC5.8□□□□□ -1.48
ZNF549Q6P9A3 AL355143.1-201ENST00000407101 841 ntBASIC5.8□□□□□ -1.48
ZNF549Q6P9A3 SNORA81-201ENST00000408493 178 ntBASIC5.8□□□□□ -1.48
ZNF549Q6P9A3 CYTOR-204ENST00000409898 560 ntTSL 5 BASIC5.8□□□□□ -1.48
ZNF549Q6P9A3 AL929472.2-201ENST00000419993 481 ntTSL 5 BASIC5.8□□□□□ -1.48
ZNF549Q6P9A3 AC000095.2-201ENST00000424407 768 ntTSL 2 BASIC5.8□□□□□ -1.48
ZNF549Q6P9A3 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC5.8□□□□□ -1.48
ZNF549Q6P9A3 UBE2V1P6-201ENST00000430840 422 ntBASIC5.8□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 115.1 ms