Protein–RNA interactions for Protein: Q6NXT2

H3F3C, Histone H3.3C, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3CQ6NXT2 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
H3F3CQ6NXT2 LINC01422-201ENST00000434868 6043 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
H3F3CQ6NXT2 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
H3F3CQ6NXT2 ZNF644-204ENST00000370440 5702 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
H3F3CQ6NXT2 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
H3F3CQ6NXT2 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC5.44□□□□□ -1.54
H3F3CQ6NXT2 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC5.44□□□□□ -1.54
H3F3CQ6NXT2 CEACAM7-202ENST00000401731 1236 ntAPPRIS P1 TSL 2 BASIC5.44□□□□□ -1.54
H3F3CQ6NXT2 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
H3F3CQ6NXT2 CPB2-AS1-201ENST00000415033 747 ntTSL 3 BASIC5.44□□□□□ -1.54
H3F3CQ6NXT2 RPL34P3-201ENST00000421454 338 ntBASIC5.44□□□□□ -1.54
H3F3CQ6NXT2 BX119321.1-201ENST00000428912 797 ntBASIC5.44□□□□□ -1.54
H3F3CQ6NXT2 AC015923.1-201ENST00000435892 305 ntTSL 2 BASIC5.44□□□□□ -1.54
H3F3CQ6NXT2 SUMO2P3-201ENST00000438311 288 ntBASIC5.44□□□□□ -1.54
H3F3CQ6NXT2 CUBNP2-201ENST00000443534 1139 ntBASIC5.44□□□□□ -1.54
H3F3CQ6NXT2 AC079117.1-201ENST00000445178 1000 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
H3F3CQ6NXT2 AC023141.9-201ENST00000458734 412 ntBASIC5.44□□□□□ -1.54
H3F3CQ6NXT2 AC108751.3-201ENST00000461814 1020 ntBASIC5.44□□□□□ -1.54
H3F3CQ6NXT2 EFCAB10-203ENST00000480514 740 ntAPPRIS ALT1 TSL 1 (best) BASIC5.44□□□□□ -1.54
H3F3CQ6NXT2 CXCL11-202ENST00000503860 767 ntAPPRIS P1 TSL 3 BASIC5.44□□□□□ -1.54
H3F3CQ6NXT2 CYCSP22-201ENST00000517555 339 ntBASIC5.44□□□□□ -1.54
H3F3CQ6NXT2 AC008429.4-201ENST00000521201 182 ntBASIC5.44□□□□□ -1.54
H3F3CQ6NXT2 PIWIL4-203ENST00000537419 831 ntTSL 2 BASIC5.44□□□□□ -1.54
H3F3CQ6NXT2 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC5.44□□□□□ -1.54
H3F3CQ6NXT2 AC010547.6-201ENST00000571789 193 ntBASIC5.44□□□□□ -1.54
H3F3CQ6NXT2 FAM72A-208ENST00000607379 1139 ntBASIC5.44□□□□□ -1.54
H3F3CQ6NXT2 uc_338.26-201ENST00000612659 160 ntBASIC5.44□□□□□ -1.54
H3F3CQ6NXT2 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
H3F3CQ6NXT2 MIR193BHG-214ENST00000641765 509 ntBASIC5.44□□□□□ -1.54
H3F3CQ6NXT2 HELZ-207ENST00000580168 6279 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
H3F3CQ6NXT2 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
H3F3CQ6NXT2 IFNE-201ENST00000448696 1475 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
H3F3CQ6NXT2 CAPN6-201ENST00000324068 3568 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
H3F3CQ6NXT2 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC5.43□□□□□ -1.54
H3F3CQ6NXT2 ZNF101P1-201ENST00000435701 1720 ntBASIC5.43□□□□□ -1.54
H3F3CQ6NXT2 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
H3F3CQ6NXT2 ADGRL3-218ENST00000514996 4731 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
H3F3CQ6NXT2 CLEC4D-201ENST00000299665 1936 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
H3F3CQ6NXT2 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC5.43□□□□□ -1.54
H3F3CQ6NXT2 AL359313.1-201ENST00000447311 2293 ntTSL 2 BASIC5.43□□□□□ -1.54
H3F3CQ6NXT2 AL355834.1-201ENST00000556602 3965 ntBASIC5.43□□□□□ -1.54
H3F3CQ6NXT2 DEFB118-201ENST00000253381 1158 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
H3F3CQ6NXT2 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
H3F3CQ6NXT2 OR7G2-201ENST00000305456 1038 ntAPPRIS P2 BASIC5.43□□□□□ -1.54
H3F3CQ6NXT2 SMARCA2-207ENST00000382186 955 ntTSL 3 BASIC5.43□□□□□ -1.54
H3F3CQ6NXT2 U3.23-201ENST00000391132 200 ntBASIC5.43□□□□□ -1.54
H3F3CQ6NXT2 RN7SKP29-201ENST00000410957 272 ntBASIC5.43□□□□□ -1.54
H3F3CQ6NXT2 LINC01762-201ENST00000423907 454 ntTSL 5 BASIC5.43□□□□□ -1.54
H3F3CQ6NXT2 AL162408.1-201ENST00000428853 433 ntTSL 5 BASIC5.43□□□□□ -1.54
H3F3CQ6NXT2 RPL12P16-201ENST00000431098 498 ntBASIC5.43□□□□□ -1.54
H3F3CQ6NXT2 AC005008.2-201ENST00000431501 715 ntTSL 3 BASIC5.43□□□□□ -1.54
H3F3CQ6NXT2 AL731534.1-201ENST00000434711 269 ntBASIC5.43□□□□□ -1.54
H3F3CQ6NXT2 RPS12P17-201ENST00000438591 377 ntBASIC5.43□□□□□ -1.54
H3F3CQ6NXT2 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC5.43□□□□□ -1.54
H3F3CQ6NXT2 AP000281.1-201ENST00000444036 316 ntBASIC5.43□□□□□ -1.54
H3F3CQ6NXT2 ACA64.4-201ENST00000459070 127 ntBASIC5.43□□□□□ -1.54
H3F3CQ6NXT2 AC106864.2-201ENST00000505632 740 ntTSL 2 BASIC5.43□□□□□ -1.54
H3F3CQ6NXT2 SEMA6A-AS1-202ENST00000508424 862 ntTSL 3 BASIC5.43□□□□□ -1.54
H3F3CQ6NXT2 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC5.43□□□□□ -1.54
H3F3CQ6NXT2 AC105036.1-201ENST00000566222 271 ntBASIC5.43□□□□□ -1.54
H3F3CQ6NXT2 DCTN5-207ENST00000568272 523 ntTSL 2 BASIC5.43□□□□□ -1.54
H3F3CQ6NXT2 AC087301.1-201ENST00000579037 321 ntTSL 3 BASIC5.43□□□□□ -1.54
H3F3CQ6NXT2 GTSCR1-201ENST00000582578 470 ntTSL 3 BASIC5.43□□□□□ -1.54
H3F3CQ6NXT2 LINC01125-220ENST00000599501 965 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
H3F3CQ6NXT2 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
H3F3CQ6NXT2 RN7SL544P-201ENST00000617232 284 ntBASIC5.43□□□□□ -1.54
H3F3CQ6NXT2 AL355974.3-201ENST00000617383 467 ntBASIC5.43□□□□□ -1.54
H3F3CQ6NXT2 AL445670.1-201ENST00000618889 801 ntBASIC5.43□□□□□ -1.54
H3F3CQ6NXT2 RN7SL763P-201ENST00000620922 284 ntBASIC5.43□□□□□ -1.54
H3F3CQ6NXT2 AL137789.1-204ENST00000623503 666 ntTSL 5 BASIC5.43□□□□□ -1.54
H3F3CQ6NXT2 FP236241.1-206ENST00000625005 987 ntTSL 5 BASIC5.43□□□□□ -1.54
H3F3CQ6NXT2 LINC01125-249ENST00000627399 1067 ntAPPRIS P5 TSL 5 BASIC5.43□□□□□ -1.54
H3F3CQ6NXT2 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
H3F3CQ6NXT2 NDST4-204ENST00000613194 3439 ntTSL 5 BASIC5.43□□□□□ -1.54
H3F3CQ6NXT2 MARCH7-201ENST00000259050 5922 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
H3F3CQ6NXT2 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC5.43□□□□□ -1.54
H3F3CQ6NXT2 RAB30-214ENST00000534141 3746 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
H3F3CQ6NXT2 SELE-204ENST00000367776 3576 ntTSL 5 BASIC5.42□□□□□ -1.54
H3F3CQ6NXT2 SELE-205ENST00000367777 3576 ntTSL 5 BASIC5.42□□□□□ -1.54
H3F3CQ6NXT2 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC5.42□□□□□ -1.54
H3F3CQ6NXT2 PDZRN4-203ENST00000539469 3041 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
H3F3CQ6NXT2 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC5.42□□□□□ -1.54
H3F3CQ6NXT2 AC116158.1-201ENST00000560231 2129 ntBASIC5.42□□□□□ -1.54
H3F3CQ6NXT2 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
H3F3CQ6NXT2 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC5.42□□□□□ -1.54
H3F3CQ6NXT2 IL21-AS1-201ENST00000417927 3748 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
H3F3CQ6NXT2 ATP5A1P4-201ENST00000556888 1605 ntBASIC5.42□□□□□ -1.54
H3F3CQ6NXT2 SNTN-201ENST00000343837 1090 ntAPPRIS P1 TSL 2 BASIC5.42□□□□□ -1.54
H3F3CQ6NXT2 MIR323A-201ENST00000362199 86 ntBASIC5.42□□□□□ -1.54
H3F3CQ6NXT2 METTL5-204ENST00000409340 472 ntTSL 5 BASIC5.42□□□□□ -1.54
H3F3CQ6NXT2 RN7SKP286-201ENST00000410894 299 ntBASIC5.42□□□□□ -1.54
H3F3CQ6NXT2 MRPL53P1-201ENST00000414323 319 ntBASIC5.42□□□□□ -1.54
H3F3CQ6NXT2 AC015977.1-201ENST00000418887 292 ntBASIC5.42□□□□□ -1.54
H3F3CQ6NXT2 AC107057.1-201ENST00000425763 319 ntTSL 3 BASIC5.42□□□□□ -1.54
H3F3CQ6NXT2 RPL5P2-201ENST00000429598 854 ntBASIC5.42□□□□□ -1.54
H3F3CQ6NXT2 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC5.42□□□□□ -1.54
H3F3CQ6NXT2 AL049649.1-201ENST00000444792 1105 ntTSL 5 BASIC5.42□□□□□ -1.54
H3F3CQ6NXT2 RPL36AP39-201ENST00000445859 318 ntBASIC5.42□□□□□ -1.54
H3F3CQ6NXT2 AL161722.1-201ENST00000446972 1032 ntBASIC5.42□□□□□ -1.54
H3F3CQ6NXT2 LRRC37A14P-201ENST00000452297 462 ntBASIC5.42□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 105.4 ms