Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 ZNF816-203ENST00000357666 2697 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
RC3H1Q5TC82 ZNF107-206ENST00000620827 5685 ntAPPRIS P4 TSL 4 BASIC8.83□□□□□ -1
RC3H1Q5TC82 DNAJC18-201ENST00000302060 5103 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
RC3H1Q5TC82 MCM8-201ENST00000265187 3442 ntAPPRIS ALT2 TSL 1 (best) BASIC8.83□□□□□ -1
RC3H1Q5TC82 POT1-AS1-203ENST00000435452 2147 ntTSL 2 BASIC8.83□□□□□ -1
RC3H1Q5TC82 GABRR1-202ENST00000435811 3106 ntTSL 2 BASIC8.83□□□□□ -1
RC3H1Q5TC82 BUB3-203ENST00000368865 7828 ntAPPRIS P3 TSL 1 (best) BASIC8.82□□□□□ -1
RC3H1Q5TC82 DAZ2-206ENST00000382440 4119 ntAPPRIS P5 TSL 5 BASIC8.82□□□□□ -1
RC3H1Q5TC82 SAMMSON-222ENST00000641901 2727 ntBASIC8.82□□□□□ -1
RC3H1Q5TC82 KDM4C-215ENST00000543771 3332 ntTSL 2 BASIC8.82□□□□□ -1
RC3H1Q5TC82 PHF21A-201ENST00000323180 3675 ntTSL 1 (best) BASIC8.82□□□□□ -1
RC3H1Q5TC82 NEK5-201ENST00000355568 2918 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
RC3H1Q5TC82 AL133268.1-201ENST00000405676 1401 ntBASIC8.82□□□□□ -1
RC3H1Q5TC82 KLHL5-203ENST00000381930 3288 ntTSL 1 (best) BASIC8.82□□□□□ -1
RC3H1Q5TC82 C7orf31-202ENST00000409280 3357 ntAPPRIS P1 TSL 2 BASIC8.82□□□□□ -1
RC3H1Q5TC82 AC145138.1-201ENST00000512908 2851 ntBASIC8.82□□□□□ -1
RC3H1Q5TC82 SLC1A2-201ENST00000278379 11696 ntAPPRIS P3 TSL 1 (best) BASIC8.82□□□□□ -1
RC3H1Q5TC82 TNFSF11-202ENST00000358545 1520 ntTSL 1 (best) BASIC8.82□□□□□ -1
RC3H1Q5TC82 TMX2-202ENST00000378312 1521 ntTSL 1 (best) BASIC8.82□□□□□ -1
RC3H1Q5TC82 LINC01361-202ENST00000452834 1526 ntTSL 1 (best) BASIC8.82□□□□□ -1
RC3H1Q5TC82 RNA5SP512-201ENST00000364550 120 ntBASIC8.82□□□□□ -1
RC3H1Q5TC82 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC8.82□□□□□ -1
RC3H1Q5TC82 RPL24P7-201ENST00000399435 453 ntBASIC8.82□□□□□ -1
RC3H1Q5TC82 LINC02257-201ENST00000412445 605 ntTSL 2 BASIC8.82□□□□□ -1
RC3H1Q5TC82 RANP4-201ENST00000413361 655 ntBASIC8.82□□□□□ -1
RC3H1Q5TC82 AC008173.1-201ENST00000418901 264 ntBASIC8.82□□□□□ -1
RC3H1Q5TC82 GTF2IP2-201ENST00000424290 697 ntBASIC8.82□□□□□ -1
RC3H1Q5TC82 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC8.82□□□□□ -1
RC3H1Q5TC82 ISM1-AS1-201ENST00000431407 652 ntTSL 1 (best) BASIC8.82□□□□□ -1
RC3H1Q5TC82 CCNB1IP1P2-201ENST00000432876 818 ntBASIC8.82□□□□□ -1
RC3H1Q5TC82 AC013410.1-201ENST00000436223 1232 ntBASIC8.82□□□□□ -1
RC3H1Q5TC82 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC8.82□□□□□ -1
RC3H1Q5TC82 COL11A2P1-205ENST00000441798 676 ntBASIC8.82□□□□□ -1
RC3H1Q5TC82 USP9YP8-201ENST00000441913 500 ntBASIC8.82□□□□□ -1
RC3H1Q5TC82 LIX1L-AS1-206ENST00000447686 846 ntTSL 2 BASIC8.82□□□□□ -1
RC3H1Q5TC82 MRPL35P2-201ENST00000448009 511 ntBASIC8.82□□□□□ -1
RC3H1Q5TC82 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC8.82□□□□□ -1
RC3H1Q5TC82 RN7SL160P-201ENST00000468558 284 ntBASIC8.82□□□□□ -1
RC3H1Q5TC82 AP000852.1-201ENST00000472460 573 ntBASIC8.82□□□□□ -1
RC3H1Q5TC82 RPL7P42-201ENST00000481005 679 ntBASIC8.82□□□□□ -1
RC3H1Q5TC82 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC8.82□□□□□ -1
RC3H1Q5TC82 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC8.82□□□□□ -1
RC3H1Q5TC82 LACTB2-AS1-203ENST00000518553 817 ntTSL 5 BASIC8.82□□□□□ -1
RC3H1Q5TC82 AL121839.1-201ENST00000556233 1185 ntBASIC8.82□□□□□ -1
RC3H1Q5TC82 PPIAL4A-201ENST00000577856 660 ntAPPRIS P1 BASIC8.82□□□□□ -1
RC3H1Q5TC82 AC011260.1-201ENST00000578420 472 ntBASIC8.82□□□□□ -1
RC3H1Q5TC82 AC243756.1-201ENST00000584068 660 ntAPPRIS P1 BASIC8.82□□□□□ -1
RC3H1Q5TC82 AC006262.3-201ENST00000597337 258 ntTSL 3 BASIC8.82□□□□□ -1
RC3H1Q5TC82 AC092316.1-201ENST00000598703 297 ntTSL 5 BASIC8.82□□□□□ -1
RC3H1Q5TC82 LINC01050-201ENST00000604485 760 ntTSL 3 BASIC8.82□□□□□ -1
RC3H1Q5TC82 AC092681.3-201ENST00000609463 678 ntBASIC8.82□□□□□ -1
RC3H1Q5TC82 AC097641.3-201ENST00000613523 464 ntBASIC8.82□□□□□ -1
RC3H1Q5TC82 AC091544.5-201ENST00000620192 3815 ntBASIC8.82□□□□□ -1
RC3H1Q5TC82 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC8.82□□□□□ -1
RC3H1Q5TC82 OR8S1-202ENST00000641651 939 ntAPPRIS P1 BASIC8.82□□□□□ -1
RC3H1Q5TC82 GRIK1-202ENST00000389124 2712 ntTSL 5 BASIC8.82□□□□□ -1
RC3H1Q5TC82 AL022068.1-201ENST00000636202 1875 ntTSL 5 BASIC8.82□□□□□ -1
RC3H1Q5TC82 ZNF229-204ENST00000614049 4507 ntAPPRIS P3 TSL 1 (best) BASIC8.82□□□□□ -1
RC3H1Q5TC82 C5orf24-201ENST00000338051 4270 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
RC3H1Q5TC82 SLC26A9-202ENST00000367134 4616 ntTSL 5 BASIC8.82□□□□□ -1
RC3H1Q5TC82 OFD1P15Y-201ENST00000411536 1392 ntBASIC8.82□□□□□ -1
RC3H1Q5TC82 MAGEB10-202ENST00000614159 1389 ntAPPRIS P1 BASIC8.82□□□□□ -1
RC3H1Q5TC82 FHL1-227ENST00000628568 2304 ntTSL 5 BASIC8.82□□□□□ -1
RC3H1Q5TC82 HSPG2-203ENST00000374695 14327 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
RC3H1Q5TC82 LINC01613-201ENST00000561476 2780 ntBASIC8.82□□□□□ -1
RC3H1Q5TC82 UBXN8-201ENST00000265616 1450 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
RC3H1Q5TC82 RXFP1-207ENST00000470033 2175 ntTSL 1 (best) BASIC8.82□□□□□ -1
RC3H1Q5TC82 GULP1-203ENST00000409609 1932 ntAPPRIS P3 TSL 2 BASIC8.82□□□□□ -1
RC3H1Q5TC82 HMGCS2-204ENST00000544913 1925 ntTSL 2 BASIC8.82□□□□□ -1
RC3H1Q5TC82 CCDC102B-210ENST00000584156 1554 ntTSL 1 (best) BASIC8.82□□□□□ -1
RC3H1Q5TC82 PAICS-208ENST00000514888 3340 ntTSL 1 (best) BASIC8.82□□□□□ -1
RC3H1Q5TC82 MITF-203ENST00000328528 4680 ntTSL 5 BASIC8.81□□□□□ -1
RC3H1Q5TC82 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
RC3H1Q5TC82 KAT14-202ENST00000435364 3618 ntAPPRIS P2 TSL 1 (best) BASIC8.81□□□□□ -1
RC3H1Q5TC82 SUN3-201ENST00000297325 1416 ntAPPRIS P1 TSL 5 BASIC8.81□□□□□ -1
RC3H1Q5TC82 PKN2-202ENST00000370513 2890 ntTSL 1 (best) BASIC8.81□□□□□ -1
RC3H1Q5TC82 MAP3K20-AS1-203ENST00000423106 2538 ntTSL 1 (best) BASIC8.81□□□□□ -1
RC3H1Q5TC82 PPARGC1B-201ENST00000309241 10568 ntAPPRIS P3 TSL 1 (best) BASIC8.81□□□□□ -1
RC3H1Q5TC82 CYP4F30P-203ENST00000438109 2250 ntTSL 1 (best) BASIC8.81□□□□□ -1
RC3H1Q5TC82 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
RC3H1Q5TC82 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC8.81□□□□□ -1
RC3H1Q5TC82 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC8.81□□□□□ -1
RC3H1Q5TC82 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC8.81□□□□□ -1
RC3H1Q5TC82 EEF1A1P40-201ENST00000412883 573 ntBASIC8.81□□□□□ -1
RC3H1Q5TC82 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC8.81□□□□□ -1
RC3H1Q5TC82 MRPS21P5-201ENST00000417885 231 ntBASIC8.81□□□□□ -1
RC3H1Q5TC82 AL356309.1-201ENST00000425153 339 ntTSL 3 BASIC8.81□□□□□ -1
RC3H1Q5TC82 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC8.81□□□□□ -1
RC3H1Q5TC82 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC8.81□□□□□ -1
RC3H1Q5TC82 AC000111.3-201ENST00000433478 193 ntBASIC8.81□□□□□ -1
RC3H1Q5TC82 PIP5K1P2-201ENST00000437005 1120 ntBASIC8.81□□□□□ -1
RC3H1Q5TC82 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC8.81□□□□□ -1
RC3H1Q5TC82 AL353633.1-201ENST00000458480 382 ntTSL 3 BASIC8.81□□□□□ -1
RC3H1Q5TC82 AL121769.1-201ENST00000469473 401 ntBASIC8.81□□□□□ -1
RC3H1Q5TC82 ZNF286A-205ENST00000472486 827 ntTSL 2 BASIC8.81□□□□□ -1
RC3H1Q5TC82 RPS27AP16-201ENST00000492222 470 ntBASIC8.81□□□□□ -1
RC3H1Q5TC82 HMGN1P16-201ENST00000508308 283 ntBASIC8.81□□□□□ -1
RC3H1Q5TC82 AC146944.3-201ENST00000509969 371 ntBASIC8.81□□□□□ -1
RC3H1Q5TC82 MAST4-IT1-201ENST00000514241 658 ntBASIC8.81□□□□□ -1
RC3H1Q5TC82 LINC02482-202ENST00000515205 422 ntTSL 2 BASIC8.81□□□□□ -1
Retrieved 100 of 98,524 protein–RNA pairs in 90.5 ms