Protein–RNA interactions for Protein: Q5S007

LRRK2, Leucine-rich repeat serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 2,527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2Q5S007 MYO6-202ENST00000369977 5597 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
LRRK2Q5S007 CDH13-209ENST00000567109 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
LRRK2Q5S007 UGT2A2-202ENST00000604629 1676 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
LRRK2Q5S007 MYO6-201ENST00000369975 5387 ntTSL 5 BASIC4.97□□□□□ -1.61
LRRK2Q5S007 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC4.97□□□□□ -1.61
LRRK2Q5S007 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC4.97□□□□□ -1.61
LRRK2Q5S007 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
LRRK2Q5S007 RPL23AP18-201ENST00000416139 468 ntBASIC4.97□□□□□ -1.61
LRRK2Q5S007 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC4.97□□□□□ -1.61
LRRK2Q5S007 CYCSP6-201ENST00000434498 302 ntBASIC4.97□□□□□ -1.61
LRRK2Q5S007 AL049649.1-201ENST00000444792 1105 ntTSL 5 BASIC4.97□□□□□ -1.61
LRRK2Q5S007 TDGF1P1-201ENST00000445734 527 ntBASIC4.97□□□□□ -1.61
LRRK2Q5S007 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC4.97□□□□□ -1.61
LRRK2Q5S007 AP005436.3-201ENST00000532849 572 ntTSL 5 BASIC4.97□□□□□ -1.61
LRRK2Q5S007 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
LRRK2Q5S007 MRPS21P7-201ENST00000566937 238 ntBASIC4.97□□□□□ -1.61
LRRK2Q5S007 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC4.97□□□□□ -1.61
LRRK2Q5S007 AC011453.2-201ENST00000603737 729 ntBASIC4.97□□□□□ -1.61
LRRK2Q5S007 TDRD3-209ENST00000621840 2497 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
LRRK2Q5S007 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC4.97□□□□□ -1.61
LRRK2Q5S007 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC4.97□□□□□ -1.61
LRRK2Q5S007 MKL2-201ENST00000318282 8608 ntAPPRIS P3 TSL 5 BASIC4.97□□□□□ -1.61
LRRK2Q5S007 POLR1D-218ENST00000636817 4592 ntTSL 5 BASIC4.97□□□□□ -1.61
LRRK2Q5S007 AC105749.1-201ENST00000631338 2008 ntBASIC4.97□□□□□ -1.61
LRRK2Q5S007 NUP210L-201ENST00000271854 5424 ntAPPRIS ALT2 TSL 5 BASIC4.97□□□□□ -1.61
LRRK2Q5S007 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC4.97□□□□□ -1.61
LRRK2Q5S007 EIF4A2-205ENST00000440191 1889 ntAPPRIS ALT1 TSL 1 (best) BASIC4.97□□□□□ -1.61
LRRK2Q5S007 ZNF644-204ENST00000370440 5702 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.61
LRRK2Q5S007 TRIM38-201ENST00000357085 9413 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.61
LRRK2Q5S007 WNK3-201ENST00000354646 11341 ntAPPRIS P3 TSL 1 (best) BASIC4.96□□□□□ -1.61
LRRK2Q5S007 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC4.96□□□□□ -1.61
LRRK2Q5S007 ADGRL3-207ENST00000507625 4843 ntAPPRIS ALT2 TSL 5 BASIC4.96□□□□□ -1.61
LRRK2Q5S007 SNORA67-201ENST00000384423 137 ntBASIC4.96□□□□□ -1.61
LRRK2Q5S007 AC068138.1-201ENST00000412635 217 ntBASIC4.96□□□□□ -1.61
LRRK2Q5S007 DNAJC19P7-201ENST00000428811 344 ntBASIC4.96□□□□□ -1.61
LRRK2Q5S007 AP003774.2-202ENST00000449694 341 ntTSL 3 BASIC4.96□□□□□ -1.61
LRRK2Q5S007 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC4.96□□□□□ -1.61
LRRK2Q5S007 LINC00518-204ENST00000491317 1228 ntTSL 2 BASIC4.96□□□□□ -1.61
LRRK2Q5S007 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC4.96□□□□□ -1.61
LRRK2Q5S007 AC026434.1-201ENST00000511474 454 ntTSL 3 BASIC4.96□□□□□ -1.61
LRRK2Q5S007 BTF3P13-201ENST00000513224 490 ntBASIC4.96□□□□□ -1.61
LRRK2Q5S007 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC4.96□□□□□ -1.61
LRRK2Q5S007 RNU4ATAC-201ENST00000580972 127 ntBASIC4.96□□□□□ -1.61
LRRK2Q5S007 ODF4-202ENST00000584943 804 ntAPPRIS ALT2 TSL 1 (best) BASIC4.96□□□□□ -1.61
LRRK2Q5S007 AC092653.1-201ENST00000608509 531 ntBASIC4.96□□□□□ -1.61
LRRK2Q5S007 OSER1-AS1-205ENST00000623343 827 ntTSL 5 BASIC4.96□□□□□ -1.61
LRRK2Q5S007 GRIA4-206ENST00000525187 2822 ntTSL 1 (best) BASIC4.96□□□□□ -1.61
LRRK2Q5S007 AC105235.1-201ENST00000623208 1816 ntBASIC4.96□□□□□ -1.61
LRRK2Q5S007 NDUFS1-201ENST00000233190 11819 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.61
LRRK2Q5S007 LINC01741-201ENST00000427173 1666 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
LRRK2Q5S007 ZFP37-201ENST00000374227 6266 ntAPPRIS P3 TSL 1 (best) BASIC4.96□□□□□ -1.62
LRRK2Q5S007 ARHGEF12-201ENST00000356641 6891 ntTSL 5 BASIC4.96□□□□□ -1.62
LRRK2Q5S007 CLEC12B-202ENST00000396502 3029 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
LRRK2Q5S007 LINC00861-201ENST00000500989 5330 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
LRRK2Q5S007 XRCC5-201ENST00000392132 3428 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
LRRK2Q5S007 ADA2-210ENST00000610390 4137 ntTSL 5 BASIC4.96□□□□□ -1.62
LRRK2Q5S007 KIAA1024-201ENST00000305428 6732 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
LRRK2Q5S007 CEP120-202ENST00000306481 4629 ntTSL 5 BASIC4.96□□□□□ -1.62
LRRK2Q5S007 AC114947.2-201ENST00000565748 2125 ntBASIC4.96□□□□□ -1.62
LRRK2Q5S007 RN7SKP227-201ENST00000364445 330 ntBASIC4.96□□□□□ -1.62
LRRK2Q5S007 AL590240.2-201ENST00000413370 894 ntBASIC4.96□□□□□ -1.62
LRRK2Q5S007 AL591468.1-201ENST00000417932 573 ntTSL 3 BASIC4.96□□□□□ -1.62
LRRK2Q5S007 AC093162.1-201ENST00000419682 124 ntBASIC4.96□□□□□ -1.62
LRRK2Q5S007 RPL7AP28-201ENST00000464513 571 ntBASIC4.96□□□□□ -1.62
LRRK2Q5S007 RPL21P129-201ENST00000491732 478 ntBASIC4.96□□□□□ -1.62
LRRK2Q5S007 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC4.96□□□□□ -1.62
LRRK2Q5S007 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC4.96□□□□□ -1.62
LRRK2Q5S007 SLC25A3P1-203ENST00000563752 460 ntTSL 2 BASIC4.96□□□□□ -1.62
LRRK2Q5S007 PWRN1-208ENST00000567647 561 ntTSL 5 BASIC4.96□□□□□ -1.62
LRRK2Q5S007 RPL27-207ENST00000590864 569 ntTSL 2 BASIC4.96□□□□□ -1.62
LRRK2Q5S007 AL137789.1-204ENST00000623503 666 ntTSL 5 BASIC4.96□□□□□ -1.62
LRRK2Q5S007 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
LRRK2Q5S007 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
LRRK2Q5S007 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
LRRK2Q5S007 RGS4-203ENST00000367909 3200 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
LRRK2Q5S007 LINC02044-201ENST00000490139 2502 ntTSL 2 BASIC4.96□□□□□ -1.62
LRRK2Q5S007 MYBL1-206ENST00000524176 2148 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
LRRK2Q5S007 ANGPT1-205ENST00000520052 1523 ntTSL 5 BASIC4.96□□□□□ -1.62
LRRK2Q5S007 TCF12-214ENST00000559710 1314 ntTSL 2 BASIC4.96□□□□□ -1.62
LRRK2Q5S007 USP8-204ENST00000425032 3559 ntTSL 2 BASIC4.96□□□□□ -1.62
LRRK2Q5S007 CDKL5-201ENST00000379989 3463 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
LRRK2Q5S007 PMFBP1-207ENST00000537465 3935 ntAPPRIS ALT2 TSL 2 BASIC4.96□□□□□ -1.62
LRRK2Q5S007 PDZRN4-203ENST00000539469 3041 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
LRRK2Q5S007 LDAH-212ENST00000619656 3663 ntTSL 2 BASIC4.95□□□□□ -1.62
LRRK2Q5S007 CASC19-221ENST00000641309 1382 ntBASIC4.95□□□□□ -1.62
LRRK2Q5S007 FAM96AP1-201ENST00000430879 482 ntBASIC4.95□□□□□ -1.62
LRRK2Q5S007 MGAT2P1-201ENST00000449718 797 ntBASIC4.95□□□□□ -1.62
LRRK2Q5S007 AC087672.1-201ENST00000479876 766 ntBASIC4.95□□□□□ -1.62
LRRK2Q5S007 ABCA11P-202ENST00000504019 2110 ntBASIC4.95□□□□□ -1.62
LRRK2Q5S007 AC012560.1-203ENST00000510550 595 ntTSL 4 BASIC4.95□□□□□ -1.62
LRRK2Q5S007 HSPE1P2-201ENST00000554777 306 ntBASIC4.95□□□□□ -1.62
LRRK2Q5S007 CASC22-201ENST00000569713 386 ntTSL 5 BASIC4.95□□□□□ -1.62
LRRK2Q5S007 AC019193.2-201ENST00000610012 634 ntBASIC4.95□□□□□ -1.62
LRRK2Q5S007 DUXB-201ENST00000633875 1079 ntAPPRIS P1 TSL 3 BASIC4.95□□□□□ -1.62
LRRK2Q5S007 ZNF253-205ENST00000640599 1208 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
LRRK2Q5S007 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
LRRK2Q5S007 JAKMIP2-205ENST00000507386 5915 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
LRRK2Q5S007 AL359195.2-201ENST00000623657 4412 ntBASIC4.95□□□□□ -1.62
LRRK2Q5S007 KLHL32-207ENST00000620278 2642 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
LRRK2Q5S007 RPGRIP1L-202ENST00000379925 5297 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 94.7 ms