Protein–RNA interactions for Protein: Q502W7

CCDC38, Coiled-coil domain-containing protein 38, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38Q502W7 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC6.34□□□□□ -1.39
CCDC38Q502W7 FSHB-202ENST00000417547 1890 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
CCDC38Q502W7 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC6.34□□□□□ -1.39
CCDC38Q502W7 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC6.34□□□□□ -1.39
CCDC38Q502W7 BCORP1-203ENST00000513194 5093 ntBASIC6.34□□□□□ -1.39
CCDC38Q502W7 AKAP7-201ENST00000263050 2238 ntTSL 5 BASIC6.34□□□□□ -1.39
CCDC38Q502W7 AC132825.1-201ENST00000463573 2247 ntBASIC6.34□□□□□ -1.39
CCDC38Q502W7 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.39
CCDC38Q502W7 RBM22-202ENST00000447771 1386 ntTSL 2 BASIC6.34□□□□□ -1.39
CCDC38Q502W7 TCP11X1-202ENST00000622971 1372 ntBASIC6.34□□□□□ -1.39
CCDC38Q502W7 TAF9-205ENST00000506736 1331 ntAPPRIS P2 TSL 1 (best) BASIC6.34□□□□□ -1.39
CCDC38Q502W7 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
CCDC38Q502W7 TSPAN8-201ENST00000247829 1227 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
CCDC38Q502W7 ACTR3C-201ENST00000252071 1218 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
CCDC38Q502W7 PSMD10-206ENST00000372296 878 ntTSL 5 BASIC6.34□□□□□ -1.39
CCDC38Q502W7 EEF1AKMT1-201ENST00000382754 875 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
CCDC38Q502W7 Z86062.1-201ENST00000406773 777 ntBASIC6.34□□□□□ -1.39
CCDC38Q502W7 DPPA2P2-201ENST00000418220 897 ntBASIC6.34□□□□□ -1.39
CCDC38Q502W7 GPN3P1-201ENST00000423883 535 ntBASIC6.34□□□□□ -1.39
CCDC38Q502W7 QKI-206ENST00000424802 954 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
CCDC38Q502W7 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC6.34□□□□□ -1.39
CCDC38Q502W7 AL356121.1-201ENST00000442911 156 ntBASIC6.34□□□□□ -1.39
CCDC38Q502W7 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC6.34□□□□□ -1.39
CCDC38Q502W7 MORF4-201ENST00000447135 971 ntBASIC6.34□□□□□ -1.39
CCDC38Q502W7 AC073476.1-201ENST00000452854 407 ntBASIC6.34□□□□□ -1.39
CCDC38Q502W7 L29074.1-201ENST00000456072 534 ntTSL 5 BASIC6.34□□□□□ -1.39
CCDC38Q502W7 RANP2-201ENST00000456833 229 ntBASIC6.34□□□□□ -1.39
CCDC38Q502W7 AC091976.1-201ENST00000458002 448 ntTSL 3 BASIC6.34□□□□□ -1.39
CCDC38Q502W7 AC073594.1-201ENST00000462065 364 ntBASIC6.34□□□□□ -1.39
CCDC38Q502W7 RN7SL39P-201ENST00000462264 297 ntBASIC6.34□□□□□ -1.39
CCDC38Q502W7 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC6.34□□□□□ -1.39
CCDC38Q502W7 AC114324.2-202ENST00000503812 134 ntBASIC6.34□□□□□ -1.39
CCDC38Q502W7 MTCO1P31-201ENST00000506355 492 ntBASIC6.34□□□□□ -1.39
CCDC38Q502W7 AC113382.2-201ENST00000506911 646 ntTSL 3 BASIC6.34□□□□□ -1.39
CCDC38Q502W7 LINC01618-201ENST00000514957 727 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
CCDC38Q502W7 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
CCDC38Q502W7 IGHV4-55-201ENST00000520889 368 ntBASIC6.34□□□□□ -1.39
CCDC38Q502W7 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC6.34□□□□□ -1.39
CCDC38Q502W7 UBE2N-204ENST00000549833 960 ntTSL 3 BASIC6.34□□□□□ -1.39
CCDC38Q502W7 CR383656.14-201ENST00000551951 406 ntBASIC6.34□□□□□ -1.39
CCDC38Q502W7 AC092376.1-201ENST00000569677 335 ntTSL 2 BASIC6.34□□□□□ -1.39
CCDC38Q502W7 AC019322.1-201ENST00000571869 389 ntBASIC6.34□□□□□ -1.39
CCDC38Q502W7 TXNP4-201ENST00000575018 310 ntBASIC6.34□□□□□ -1.39
CCDC38Q502W7 AC100844.1-201ENST00000580622 440 ntTSL 5 BASIC6.34□□□□□ -1.39
CCDC38Q502W7 AP002884.5-201ENST00000595053 1132 ntBASIC6.34□□□□□ -1.39
CCDC38Q502W7 AL158211.2-201ENST00000607282 395 ntBASIC6.34□□□□□ -1.39
CCDC38Q502W7 LIPF-205ENST00000608620 1290 ntTSL 2 BASIC6.34□□□□□ -1.39
CCDC38Q502W7 GAPDHP41-201ENST00000613707 975 ntBASIC6.34□□□□□ -1.39
CCDC38Q502W7 AC011346.1-204ENST00000638089 1210 ntAPPRIS P5 TSL 3 BASIC6.34□□□□□ -1.39
CCDC38Q502W7 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC6.34□□□□□ -1.39
CCDC38Q502W7 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
CCDC38Q502W7 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
CCDC38Q502W7 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC6.34□□□□□ -1.39
CCDC38Q502W7 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
CCDC38Q502W7 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC6.34□□□□□ -1.39
CCDC38Q502W7 PSD3-219ENST00000614430 6136 ntTSL 5 BASIC6.34□□□□□ -1.4
CCDC38Q502W7 AC217777.1-201ENST00000570034 1471 ntBASIC6.34□□□□□ -1.4
CCDC38Q502W7 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC6.34□□□□□ -1.4
CCDC38Q502W7 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.4
CCDC38Q502W7 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC6.33□□□□□ -1.4
CCDC38Q502W7 JCHAIN-201ENST00000254801 1438 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
CCDC38Q502W7 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC6.33□□□□□ -1.4
CCDC38Q502W7 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC6.33□□□□□ -1.4
CCDC38Q502W7 ZNF610-208ENST00000613461 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
CCDC38Q502W7 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
CCDC38Q502W7 AC124312.1-201ENST00000551312 1325 ntAPPRIS P5 TSL 5 BASIC6.33□□□□□ -1.4
CCDC38Q502W7 ATP13A4-202ENST00000342695 4208 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
CCDC38Q502W7 OR2A12-202ENST00000641592 4163 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
CCDC38Q502W7 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC6.33□□□□□ -1.4
CCDC38Q502W7 ZNF66-202ENST00000360204 1120 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
CCDC38Q502W7 C2orf88-202ENST00000396974 998 ntAPPRIS P1 TSL 2 BASIC6.33□□□□□ -1.4
CCDC38Q502W7 AL034417.1-201ENST00000399343 800 ntBASIC6.33□□□□□ -1.4
CCDC38Q502W7 VIM2P-201ENST00000402383 1294 ntBASIC6.33□□□□□ -1.4
CCDC38Q502W7 AL096800.1-201ENST00000405326 893 ntBASIC6.33□□□□□ -1.4
CCDC38Q502W7 DHFRP2-201ENST00000414224 547 ntBASIC6.33□□□□□ -1.4
CCDC38Q502W7 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC6.33□□□□□ -1.4
CCDC38Q502W7 AC019205.1-201ENST00000421830 730 ntBASIC6.33□□□□□ -1.4
CCDC38Q502W7 AC093084.1-201ENST00000424233 687 ntBASIC6.33□□□□□ -1.4
CCDC38Q502W7 AL354707.3-201ENST00000427308 331 ntBASIC6.33□□□□□ -1.4
CCDC38Q502W7 ARPP21-215ENST00000432682 1015 ntTSL 5 BASIC6.33□□□□□ -1.4
CCDC38Q502W7 AC016582.1-203ENST00000433142 502 ntTSL 3 BASIC6.33□□□□□ -1.4
CCDC38Q502W7 AC079117.1-201ENST00000445178 1000 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
CCDC38Q502W7 AC104457.2-201ENST00000446055 467 ntTSL 2 BASIC6.33□□□□□ -1.4
CCDC38Q502W7 MAGI2-AS3-210ENST00000448636 798 ntTSL 5 BASIC6.33□□□□□ -1.4
CCDC38Q502W7 RPSAP37-201ENST00000470913 821 ntBASIC6.33□□□□□ -1.4
CCDC38Q502W7 RN7SL369P-201ENST00000477138 299 ntBASIC6.33□□□□□ -1.4
CCDC38Q502W7 RN7SL284P-201ENST00000498823 275 ntBASIC6.33□□□□□ -1.4
CCDC38Q502W7 AC027338.1-201ENST00000514840 825 ntBASIC6.33□□□□□ -1.4
CCDC38Q502W7 RNA5SP206-201ENST00000516703 121 ntBASIC6.33□□□□□ -1.4
CCDC38Q502W7 DEFB134-202ENST00000526438 1068 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
CCDC38Q502W7 AC135983.3-201ENST00000528049 1226 ntBASIC6.33□□□□□ -1.4
CCDC38Q502W7 RAB30-209ENST00000532548 644 ntTSL 3 BASIC6.33□□□□□ -1.4
CCDC38Q502W7 AC137590.1-201ENST00000542422 495 ntTSL 3 BASIC6.33□□□□□ -1.4
CCDC38Q502W7 LINC02451-201ENST00000546982 565 ntTSL 4 BASIC6.33□□□□□ -1.4
CCDC38Q502W7 AC008055.1-201ENST00000547032 609 ntBASIC6.33□□□□□ -1.4
CCDC38Q502W7 CNEP1R1-204ENST00000562576 656 ntTSL 5 BASIC6.33□□□□□ -1.4
CCDC38Q502W7 RPGRIP1L-208ENST00000566096 893 ntTSL 2 BASIC6.33□□□□□ -1.4
CCDC38Q502W7 AC025283.1-201ENST00000572039 734 ntBASIC6.33□□□□□ -1.4
CCDC38Q502W7 AC005242.1-201ENST00000585658 438 ntBASIC6.33□□□□□ -1.4
CCDC38Q502W7 MIR132-201ENST00000591554 101 ntBASIC6.33□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 95.1 ms