Protein–RNA interactions for Protein: Q3MJ40

CCDC144B, Coiled-coil domain-containing protein 144B, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144BQ3MJ40 BNC2-203ENST00000380672 12844 ntAPPRIS P2 TSL 2 BASIC7.43□□□□□ -1.22
CCDC144BQ3MJ40 IL1RL1-202ENST00000311734 3994 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
CCDC144BQ3MJ40 CLCN3-211ENST00000613795 5874 ntTSL 5 BASIC7.43□□□□□ -1.22
CCDC144BQ3MJ40 LGI1-219ENST00000636155 1618 ntTSL 5 BASIC7.43□□□□□ -1.22
CCDC144BQ3MJ40 FASLG-201ENST00000340030 917 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
CCDC144BQ3MJ40 RNU5E-10P-201ENST00000363506 118 ntBASIC7.43□□□□□ -1.22
CCDC144BQ3MJ40 FETUB-203ENST00000382136 1040 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
CCDC144BQ3MJ40 RPA3-204ENST00000406109 434 ntTSL 3 BASIC7.43□□□□□ -1.22
CCDC144BQ3MJ40 LINC01638-201ENST00000418271 552 ntTSL 3 BASIC7.43□□□□□ -1.22
CCDC144BQ3MJ40 HSPE1P16-201ENST00000426640 348 ntBASIC7.43□□□□□ -1.22
CCDC144BQ3MJ40 AL035458.1-201ENST00000433096 585 ntBASIC7.43□□□□□ -1.22
CCDC144BQ3MJ40 FABP5P3-201ENST00000437960 408 ntBASIC7.43□□□□□ -1.22
CCDC144BQ3MJ40 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC7.43□□□□□ -1.22
CCDC144BQ3MJ40 RPL7P61-201ENST00000451721 751 ntBASIC7.43□□□□□ -1.22
CCDC144BQ3MJ40 HNRNPDLP3-201ENST00000456745 380 ntBASIC7.43□□□□□ -1.22
CCDC144BQ3MJ40 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
CCDC144BQ3MJ40 AC104164.3-201ENST00000467363 1258 ntBASIC7.43□□□□□ -1.22
CCDC144BQ3MJ40 AC107398.1-201ENST00000486904 505 ntBASIC7.43□□□□□ -1.22
CCDC144BQ3MJ40 GNPDA2-202ENST00000507534 1050 ntTSL 2 BASIC7.43□□□□□ -1.22
CCDC144BQ3MJ40 ZNF519P4-201ENST00000514008 125 ntBASIC7.43□□□□□ -1.22
CCDC144BQ3MJ40 SCARNA5-201ENST00000516201 276 ntBASIC7.43□□□□□ -1.22
CCDC144BQ3MJ40 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC7.43□□□□□ -1.22
CCDC144BQ3MJ40 AP003059.1-201ENST00000526206 432 ntTSL 5 BASIC7.43□□□□□ -1.22
CCDC144BQ3MJ40 AL133481.2-201ENST00000538322 367 ntTSL 2 BASIC7.43□□□□□ -1.22
CCDC144BQ3MJ40 ASXL1-208ENST00000555343 1034 ntTSL 5 BASIC7.43□□□□□ -1.22
CCDC144BQ3MJ40 AC023825.1-201ENST00000566704 1030 ntBASIC7.43□□□□□ -1.22
CCDC144BQ3MJ40 AC002519.2-203ENST00000567043 837 ntBASIC7.43□□□□□ -1.22
CCDC144BQ3MJ40 CBLN2-208ENST00000584764 543 ntTSL 4 BASIC7.43□□□□□ -1.22
CCDC144BQ3MJ40 AC100863.1-201ENST00000584843 560 ntTSL 4 BASIC7.43□□□□□ -1.22
CCDC144BQ3MJ40 GLYATL1P2-202ENST00000588046 902 ntBASIC7.43□□□□□ -1.22
CCDC144BQ3MJ40 AC069431.2-201ENST00000604149 1099 ntBASIC7.43□□□□□ -1.22
CCDC144BQ3MJ40 AC079610.2-201ENST00000604818 690 ntBASIC7.43□□□□□ -1.22
CCDC144BQ3MJ40 AC013244.3-201ENST00000605614 388 ntBASIC7.43□□□□□ -1.22
CCDC144BQ3MJ40 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC7.43□□□□□ -1.22
CCDC144BQ3MJ40 AC005393.1-201ENST00000617916 584 ntBASIC7.43□□□□□ -1.22
CCDC144BQ3MJ40 AP000577.1-201ENST00000624366 878 ntBASIC7.43□□□□□ -1.22
CCDC144BQ3MJ40 LINC01002-237ENST00000634025 555 ntTSL 5 BASIC7.43□□□□□ -1.22
CCDC144BQ3MJ40 GPR155-206ENST00000614352 7321 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
CCDC144BQ3MJ40 NBPF11-204ENST00000614785 4343 ntAPPRIS ALT2 TSL 5 BASIC7.43□□□□□ -1.22
CCDC144BQ3MJ40 NEMF-201ENST00000298310 6234 ntAPPRIS P1 TSL 5 BASIC7.43□□□□□ -1.22
CCDC144BQ3MJ40 HMG20A-201ENST00000336216 4046 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
CCDC144BQ3MJ40 CUL1-204ENST00000617797 2508 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
CCDC144BQ3MJ40 ZNF532-223ENST00000591230 4450 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
CCDC144BQ3MJ40 AC006511.3-201ENST00000624929 1783 ntBASIC7.43□□□□□ -1.22
CCDC144BQ3MJ40 KCNJ10-207ENST00000638868 3883 ntAPPRIS P1 TSL 5 BASIC7.43□□□□□ -1.22
CCDC144BQ3MJ40 CNIH1-201ENST00000216416 4793 ntAPPRIS P2 TSL 1 (best) BASIC7.43□□□□□ -1.22
CCDC144BQ3MJ40 PHEX-AS1-201ENST00000424650 1906 ntTSL 2 BASIC7.42□□□□□ -1.22
CCDC144BQ3MJ40 ALPK2-201ENST00000361673 7303 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
CCDC144BQ3MJ40 KLHL41-201ENST00000284669 2464 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
CCDC144BQ3MJ40 MT-RNR2-201ENST00000387347 1559 ntBASIC7.42□□□□□ -1.22
CCDC144BQ3MJ40 FANCD2-205ENST00000431693 2450 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
CCDC144BQ3MJ40 TEK-201ENST00000380036 4760 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
CCDC144BQ3MJ40 LINC01504-201ENST00000436054 2078 ntTSL 2 BASIC7.42□□□□□ -1.22
CCDC144BQ3MJ40 GLYATL1P1-201ENST00000528297 1607 ntBASIC7.42□□□□□ -1.22
CCDC144BQ3MJ40 HSPD1P8-201ENST00000400121 1658 ntBASIC7.42□□□□□ -1.22
CCDC144BQ3MJ40 CDKAL1-204ENST00000613575 1673 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
CCDC144BQ3MJ40 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
CCDC144BQ3MJ40 AC117402.1-202ENST00000383686 820 ntTSL 2 BASIC7.42□□□□□ -1.22
CCDC144BQ3MJ40 ATP5HP3-201ENST00000396994 486 ntBASIC7.42□□□□□ -1.22
CCDC144BQ3MJ40 SNORA77.2-201ENST00000408571 112 ntBASIC7.42□□□□□ -1.22
CCDC144BQ3MJ40 AL359092.1-201ENST00000417156 265 ntBASIC7.42□□□□□ -1.22
CCDC144BQ3MJ40 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC7.42□□□□□ -1.22
CCDC144BQ3MJ40 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC7.42□□□□□ -1.22
CCDC144BQ3MJ40 OSTCP4-201ENST00000424397 449 ntBASIC7.42□□□□□ -1.22
CCDC144BQ3MJ40 AC092865.3-201ENST00000425390 1026 ntBASIC7.42□□□□□ -1.22
CCDC144BQ3MJ40 ARF4P4-201ENST00000439608 520 ntBASIC7.42□□□□□ -1.22
CCDC144BQ3MJ40 RPL5P7-201ENST00000444235 813 ntBASIC7.42□□□□□ -1.22
CCDC144BQ3MJ40 AC087501.1-201ENST00000445617 715 ntTSL 5 BASIC7.42□□□□□ -1.22
CCDC144BQ3MJ40 AL731661.2-201ENST00000448824 806 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
CCDC144BQ3MJ40 HMGB1P7-201ENST00000450921 612 ntBASIC7.42□□□□□ -1.22
CCDC144BQ3MJ40 LINC01789-202ENST00000455614 491 ntTSL 3 BASIC7.42□□□□□ -1.22
CCDC144BQ3MJ40 RN7SL254P-201ENST00000460609 284 ntBASIC7.42□□□□□ -1.22
CCDC144BQ3MJ40 AC078785.1-205ENST00000491578 482 ntTSL 4 BASIC7.42□□□□□ -1.22
CCDC144BQ3MJ40 DUBR-205ENST00000495228 411 ntTSL 2 BASIC7.42□□□□□ -1.22
CCDC144BQ3MJ40 NPM1P27-201ENST00000502784 830 ntBASIC7.42□□□□□ -1.22
CCDC144BQ3MJ40 SUMO2P5-201ENST00000506790 245 ntBASIC7.42□□□□□ -1.22
CCDC144BQ3MJ40 AC008429.2-201ENST00000523057 864 ntBASIC7.42□□□□□ -1.22
CCDC144BQ3MJ40 AP003717.3-201ENST00000544832 1180 ntBASIC7.42□□□□□ -1.22
CCDC144BQ3MJ40 MTND1P24-201ENST00000552175 861 ntBASIC7.42□□□□□ -1.22
CCDC144BQ3MJ40 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC7.42□□□□□ -1.22
CCDC144BQ3MJ40 AL049838.1-201ENST00000563647 981 ntBASIC7.42□□□□□ -1.22
CCDC144BQ3MJ40 MIR4509-3-201ENST00000578671 94 ntBASIC7.42□□□□□ -1.22
CCDC144BQ3MJ40 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC7.42□□□□□ -1.22
CCDC144BQ3MJ40 MIR4509-2-201ENST00000583920 94 ntBASIC7.42□□□□□ -1.22
CCDC144BQ3MJ40 AC015574.1-205ENST00000611285 524 ntTSL 5 BASIC7.42□□□□□ -1.22
CCDC144BQ3MJ40 AC010333.3-201ENST00000615100 402 ntBASIC7.42□□□□□ -1.22
CCDC144BQ3MJ40 MIR4509-1-201ENST00000618224 94 ntBASIC7.42□□□□□ -1.22
CCDC144BQ3MJ40 AC087633.2-201ENST00000618611 725 ntTSL 3 BASIC7.42□□□□□ -1.22
CCDC144BQ3MJ40 VPS29-212ENST00000621131 1124 ntTSL 3 BASIC7.42□□□□□ -1.22
CCDC144BQ3MJ40 AC012254.5-201ENST00000623573 478 ntBASIC7.42□□□□□ -1.22
CCDC144BQ3MJ40 AL357140.4-201ENST00000636827 412 ntBASIC7.42□□□□□ -1.22
CCDC144BQ3MJ40 B3GALT5-203ENST00000380620 13170 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
CCDC144BQ3MJ40 MCM8-201ENST00000265187 3442 ntAPPRIS ALT2 TSL 1 (best) BASIC7.42□□□□□ -1.22
CCDC144BQ3MJ40 AC117409.1-201ENST00000470499 1310 ntBASIC7.42□□□□□ -1.22
CCDC144BQ3MJ40 AL162726.3-201ENST00000637606 1301 ntTSL 5 BASIC7.42□□□□□ -1.22
CCDC144BQ3MJ40 PCDH18-203ENST00000507846 4625 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
CCDC144BQ3MJ40 SCN2A-215ENST00000637266 8610 ntAPPRIS ALT1 TSL 5 BASIC7.42□□□□□ -1.22
CCDC144BQ3MJ40 AC113146.2-201ENST00000560743 1961 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
CCDC144BQ3MJ40 AC104966.1-201ENST00000467010 1464 ntBASIC7.42□□□□□ -1.22
CCDC144BQ3MJ40 CEP128-202ENST00000281129 4461 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 84.9 ms