Protein–RNA interactions for Protein: P54753

EPHB3, Ephrin type-B receptor 3, humanhuman

Predictions only

Length 998 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3P54753 AC002310.3-201ENST00000569728 723 ntBASIC6.84□□□□□ -1.31
EPHB3P54753 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC6.84□□□□□ -1.31
EPHB3P54753 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC6.84□□□□□ -1.31
EPHB3P54753 BUB1P1-201ENST00000603541 607 ntBASIC6.84□□□□□ -1.31
EPHB3P54753 LY86-AS1-206ENST00000607278 677 ntTSL 3 BASIC6.84□□□□□ -1.31
EPHB3P54753 VIS1.1-201ENST00000610517 203 ntBASIC6.84□□□□□ -1.31
EPHB3P54753 DAOA-AS1_1.1-201ENST00000613021 201 ntBASIC6.84□□□□□ -1.31
EPHB3P54753 AC015540.1-201ENST00000615828 501 ntBASIC6.84□□□□□ -1.31
EPHB3P54753 AL603755.1-201ENST00000619504 163 ntBASIC6.84□□□□□ -1.31
EPHB3P54753 AC092574.2-201ENST00000631198 753 ntTSL 3 BASIC6.84□□□□□ -1.31
EPHB3P54753 LINC01002-237ENST00000634025 555 ntTSL 5 BASIC6.84□□□□□ -1.31
EPHB3P54753 AC007671.2-201ENST00000637344 619 ntBASIC6.84□□□□□ -1.31
EPHB3P54753 LINC02341-202ENST00000637462 1295 ntTSL 5 BASIC6.84□□□□□ -1.31
EPHB3P54753 AL392088.2-201ENST00000637607 285 ntBASIC6.84□□□□□ -1.31
EPHB3P54753 OR2AK2-202ENST00000641852 1008 ntAPPRIS P2 BASIC6.84□□□□□ -1.31
EPHB3P54753 ZNF625-ZNF20-201ENST00000430024 2651 ntAPPRIS P5 TSL 5 BASIC6.84□□□□□ -1.31
EPHB3P54753 BMPR1B-201ENST00000264568 1807 ntAPPRIS P1 TSL 2 BASIC6.84□□□□□ -1.31
EPHB3P54753 VN1R1-201ENST00000321039 2353 ntAPPRIS P1 BASIC6.84□□□□□ -1.31
EPHB3P54753 AC106038.1-201ENST00000501194 3473 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
EPHB3P54753 LCOR-201ENST00000286067 4542 ntBASIC6.84□□□□□ -1.31
EPHB3P54753 APOL4-212ENST00000616056 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC6.84□□□□□ -1.31
EPHB3P54753 NXF2B-204ENST00000618302 2884 ntAPPRIS P1 TSL 2 BASIC6.84□□□□□ -1.31
EPHB3P54753 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC6.84□□□□□ -1.31
EPHB3P54753 ELMO2-203ENST00000372176 3678 ntTSL 5 BASIC6.84□□□□□ -1.31
EPHB3P54753 TMEM269-204ENST00000637012 3354 ntAPPRIS ALT2 TSL 5 BASIC6.84□□□□□ -1.31
EPHB3P54753 ZNF559-212ENST00000592896 1488 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
EPHB3P54753 TOR1AIP2-203ENST00000482587 7067 ntTSL 2 BASIC6.84□□□□□ -1.31
EPHB3P54753 ABI1-207ENST00000376142 3576 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
EPHB3P54753 KAT6A-202ENST00000396930 9285 ntAPPRIS P3 TSL 5 BASIC6.84□□□□□ -1.32
EPHB3P54753 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC6.84□□□□□ -1.32
EPHB3P54753 CASC19-246ENST00000641625 1606 ntBASIC6.83□□□□□ -1.32
EPHB3P54753 NPIPB13-201ENST00000520915 3584 ntAPPRIS P1 TSL 5 BASIC6.83□□□□□ -1.32
EPHB3P54753 RACGAP1-203ENST00000454520 3080 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
EPHB3P54753 TMEM132B-201ENST00000299308 10906 ntAPPRIS P3 TSL 5 BASIC6.83□□□□□ -1.32
EPHB3P54753 ZNF484-204ENST00000395506 4031 ntTSL 3 BASIC6.83□□□□□ -1.32
EPHB3P54753 SYTL5-201ENST00000297875 4722 ntTSL 5 BASIC6.83□□□□□ -1.32
EPHB3P54753 CHCHD7-203ENST00000396723 1550 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
EPHB3P54753 LINC01011-204ENST00000605901 1573 ntTSL 2 BASIC6.83□□□□□ -1.32
EPHB3P54753 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC6.83□□□□□ -1.32
EPHB3P54753 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
EPHB3P54753 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC6.83□□□□□ -1.32
EPHB3P54753 LRRC31-202ENST00000316428 2520 ntAPPRIS P3 TSL 1 (best) BASIC6.83□□□□□ -1.32
EPHB3P54753 SLF2-202ENST00000370269 3712 ntAPPRIS ALT2 TSL 1 (best) BASIC6.83□□□□□ -1.32
EPHB3P54753 RRN3-202ENST00000327307 2039 ntTSL 2 BASIC6.83□□□□□ -1.32
EPHB3P54753 PDE4B-207ENST00000480109 2037 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
EPHB3P54753 ADA2-201ENST00000262607 3925 ntAPPRIS P3 TSL 1 (best) BASIC6.83□□□□□ -1.32
EPHB3P54753 ANKRD12-201ENST00000262126 11288 ntAPPRIS P3 TSL 1 (best) BASIC6.83□□□□□ -1.32
EPHB3P54753 PCDH18-203ENST00000507846 4625 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
EPHB3P54753 MCM8-201ENST00000265187 3442 ntAPPRIS ALT2 TSL 1 (best) BASIC6.83□□□□□ -1.32
EPHB3P54753 PBRM1-202ENST00000337303 4825 ntAPPRIS ALT1 TSL 1 (best) BASIC6.83□□□□□ -1.32
EPHB3P54753 AQR-201ENST00000156471 9694 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
EPHB3P54753 AC010328.1-201ENST00000596769 4060 ntTSL 2 BASIC6.83□□□□□ -1.32
EPHB3P54753 CDY2A-201ENST00000250838 1954 ntAPPRIS ALT1 BASIC6.83□□□□□ -1.32
EPHB3P54753 CLEC2D-202ENST00000261340 935 ntAPPRIS ALT2 TSL 1 (best) BASIC6.83□□□□□ -1.32
EPHB3P54753 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
EPHB3P54753 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC6.83□□□□□ -1.32
EPHB3P54753 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
EPHB3P54753 RNU4-27P-201ENST00000410889 139 ntBASIC6.83□□□□□ -1.32
EPHB3P54753 LINC01881-201ENST00000416103 412 ntBASIC6.83□□□□□ -1.32
EPHB3P54753 NIFKP3-201ENST00000417799 865 ntBASIC6.83□□□□□ -1.32
EPHB3P54753 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC6.83□□□□□ -1.32
EPHB3P54753 AC007403.1-201ENST00000427579 567 ntTSL 4 BASIC6.83□□□□□ -1.32
EPHB3P54753 NEK4P1-201ENST00000433383 879 ntBASIC6.83□□□□□ -1.32
EPHB3P54753 AC003989.1-201ENST00000434569 565 ntBASIC6.83□□□□□ -1.32
EPHB3P54753 AC002486.2-201ENST00000447806 590 ntBASIC6.83□□□□□ -1.32
EPHB3P54753 AC022498.1-201ENST00000449845 696 ntTSL 3 BASIC6.83□□□□□ -1.32
EPHB3P54753 AL122019.1-202ENST00000458070 546 ntTSL 5 BASIC6.83□□□□□ -1.32
EPHB3P54753 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC6.83□□□□□ -1.32
EPHB3P54753 RN7SL254P-201ENST00000460609 284 ntBASIC6.83□□□□□ -1.32
EPHB3P54753 AC008379.1-201ENST00000463655 464 ntBASIC6.83□□□□□ -1.32
EPHB3P54753 AC020779.1-201ENST00000478757 796 ntBASIC6.83□□□□□ -1.32
EPHB3P54753 SETP6-201ENST00000479329 568 ntBASIC6.83□□□□□ -1.32
EPHB3P54753 RN7SL561P-201ENST00000488553 281 ntBASIC6.83□□□□□ -1.32
EPHB3P54753 OR9N1P-201ENST00000491296 333 ntBASIC6.83□□□□□ -1.32
EPHB3P54753 AC104779.1-201ENST00000503557 441 ntTSL 3 BASIC6.83□□□□□ -1.32
EPHB3P54753 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC6.83□□□□□ -1.32
EPHB3P54753 AC105919.1-201ENST00000507203 393 ntTSL 3 BASIC6.83□□□□□ -1.32
EPHB3P54753 AC113420.1-201ENST00000507903 571 ntBASIC6.83□□□□□ -1.32
EPHB3P54753 AC110011.1-201ENST00000518260 582 ntTSL 3 BASIC6.83□□□□□ -1.32
EPHB3P54753 TMEM68-213ENST00000522576 826 ntTSL 2 BASIC6.83□□□□□ -1.32
EPHB3P54753 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
EPHB3P54753 LINC02400-201ENST00000548210 351 ntTSL 2 BASIC6.83□□□□□ -1.32
EPHB3P54753 AC012555.2-201ENST00000549448 413 ntTSL 3 BASIC6.83□□□□□ -1.32
EPHB3P54753 AC079793.1-201ENST00000553076 713 ntTSL 4 BASIC6.83□□□□□ -1.32
EPHB3P54753 AC008056.2-201ENST00000553812 551 ntTSL 5 BASIC6.83□□□□□ -1.32
EPHB3P54753 AC002519.2-203ENST00000567043 837 ntBASIC6.83□□□□□ -1.32
EPHB3P54753 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC6.83□□□□□ -1.32
EPHB3P54753 AL353811.1-202ENST00000602614 618 ntTSL 3 BASIC6.83□□□□□ -1.32
EPHB3P54753 HIRAP1-201ENST00000605318 787 ntBASIC6.83□□□□□ -1.32
EPHB3P54753 AL021997.1-201ENST00000605757 193 ntBASIC6.83□□□□□ -1.32
EPHB3P54753 AC069234.5-201ENST00000611056 416 ntBASIC6.83□□□□□ -1.32
EPHB3P54753 AL356752.1-201ENST00000615844 593 ntBASIC6.83□□□□□ -1.32
EPHB3P54753 AL590410.1-201ENST00000617925 333 ntBASIC6.83□□□□□ -1.32
EPHB3P54753 AL121890.3-201ENST00000618494 516 ntBASIC6.83□□□□□ -1.32
EPHB3P54753 AC131159.1-201ENST00000621854 213 ntBASIC6.83□□□□□ -1.32
EPHB3P54753 AC069542.2-201ENST00000624816 216 ntBASIC6.83□□□□□ -1.32
EPHB3P54753 AC090897.3-201ENST00000636973 1157 ntBASIC6.83□□□□□ -1.32
EPHB3P54753 SORBS1-205ENST00000371227 7279 ntAPPRIS ALT2 TSL 1 (best) BASIC6.83□□□□□ -1.32
EPHB3P54753 ANGPT2-204ENST00000629816 2602 ntAPPRIS ALT1 TSL 1 (best) BASIC6.83□□□□□ -1.32
EPHB3P54753 DCC-215ENST00000581580 3517 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 77.7 ms