Protein–RNA interactions for Protein: P51587

BRCA2, Breast cancer type 2 susceptibility protein, humanhuman

Predictions only

Length 3,418 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2P51587 GPR107-202ENST00000372406 7353 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
BRCA2P51587 OR5B12-201ENST00000302572 1054 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
BRCA2P51587 SLC6A13-202ENST00000436453 1101 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
BRCA2P51587 EEF1A1P1-201ENST00000447052 739 ntBASIC5.93□□□□□ -1.46
BRCA2P51587 AP003028.1-203ENST00000525832 444 ntTSL 3 BASIC5.93□□□□□ -1.46
BRCA2P51587 AL049875.1-201ENST00000554328 582 ntTSL 4 BASIC5.93□□□□□ -1.46
BRCA2P51587 FRY-202ENST00000380250 10688 ntTSL 5 BASIC5.93□□□□□ -1.46
BRCA2P51587 FRY-209ENST00000642040 10697 ntBASIC5.93□□□□□ -1.46
BRCA2P51587 CLTC-210ENST00000579456 2301 ntTSL 5 BASIC5.93□□□□□ -1.46
BRCA2P51587 MBP-206ENST00000397863 4800 ntTSL 3 BASIC5.93□□□□□ -1.46
BRCA2P51587 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC5.93□□□□□ -1.46
BRCA2P51587 MYH2-201ENST00000245503 6339 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
BRCA2P51587 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC5.92□□□□□ -1.46
BRCA2P51587 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC5.92□□□□□ -1.46
BRCA2P51587 SLC9A6-212ENST00000637195 4858 ntTSL 5 BASIC5.92□□□□□ -1.46
BRCA2P51587 UNC5C-201ENST00000453304 9875 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
BRCA2P51587 TACC2-210ENST00000369005 9673 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
BRCA2P51587 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC5.92□□□□□ -1.46
BRCA2P51587 ANO3-201ENST00000256737 6642 ntAPPRIS P3 TSL 1 (best) BASIC5.92□□□□□ -1.46
BRCA2P51587 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC5.92□□□□□ -1.46
BRCA2P51587 RPL12P28-201ENST00000430852 489 ntBASIC5.92□□□□□ -1.46
BRCA2P51587 AC009643.1-201ENST00000532030 391 ntBASIC5.92□□□□□ -1.46
BRCA2P51587 AC027334.1-201ENST00000603257 310 ntBASIC5.92□□□□□ -1.46
BRCA2P51587 ZNRD1ASP-221ENST00000637794 1074 ntBASIC5.92□□□□□ -1.46
BRCA2P51587 SEL1L-201ENST00000336735 7925 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
BRCA2P51587 DHX40P1-201ENST00000588725 1412 ntBASIC5.92□□□□□ -1.46
BRCA2P51587 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
BRCA2P51587 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC5.92□□□□□ -1.46
BRCA2P51587 GPNMB-201ENST00000258733 2862 ntAPPRIS P3 TSL 1 (best) BASIC5.92□□□□□ -1.46
BRCA2P51587 POLR2J4-202ENST00000427076 6466 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
BRCA2P51587 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC5.92□□□□□ -1.46
BRCA2P51587 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
BRCA2P51587 NKD1-201ENST00000268459 17105 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
BRCA2P51587 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
BRCA2P51587 RNA5SP387-201ENST00000364226 106 ntBASIC5.92□□□□□ -1.46
BRCA2P51587 RN7SKP151-201ENST00000410230 316 ntBASIC5.92□□□□□ -1.46
BRCA2P51587 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
BRCA2P51587 AC068522.1-201ENST00000482895 345 ntBASIC5.92□□□□□ -1.46
BRCA2P51587 NPM1P42-201ENST00000560329 862 ntBASIC5.92□□□□□ -1.46
BRCA2P51587 RN7SL356P-201ENST00000582228 248 ntBASIC5.92□□□□□ -1.46
BRCA2P51587 AL445647.2-201ENST00000615170 130 ntBASIC5.92□□□□□ -1.46
BRCA2P51587 AC116631.1-202ENST00000640984 683 ntBASIC5.92□□□□□ -1.46
BRCA2P51587 SUPT7L-202ENST00000404798 4114 ntTSL 2 BASIC5.92□□□□□ -1.46
BRCA2P51587 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC5.92□□□□□ -1.46
BRCA2P51587 GATAD2B-204ENST00000634544 2342 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
BRCA2P51587 DNMBP-204ENST00000636706 5437 ntTSL 2 BASIC5.92□□□□□ -1.46
BRCA2P51587 SEMA6D-206ENST00000389428 5874 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
BRCA2P51587 SLAMF6-203ENST00000368059 2743 ntAPPRIS P3 TSL 1 (best) BASIC5.92□□□□□ -1.46
BRCA2P51587 CC2D2A-202ENST00000424120 5249 ntAPPRIS P3 TSL 5 BASIC5.92□□□□□ -1.46
BRCA2P51587 RAD54B-201ENST00000297592 1879 ntTSL 2 BASIC5.92□□□□□ -1.46
BRCA2P51587 MAGI2-235ENST00000637282 3174 ntTSL 5 BASIC5.92□□□□□ -1.46
BRCA2P51587 RNU2-50P-201ENST00000410494 143 ntBASIC5.92□□□□□ -1.46
BRCA2P51587 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC5.92□□□□□ -1.46
BRCA2P51587 C9orf57-202ENST00000424431 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC5.92□□□□□ -1.46
BRCA2P51587 AL139231.1-201ENST00000431001 312 ntTSL 3 BASIC5.92□□□□□ -1.46
BRCA2P51587 AC011005.3-201ENST00000491624 395 ntBASIC5.92□□□□□ -1.46
BRCA2P51587 AC084048.1-201ENST00000505494 640 ntTSL 3 BASIC5.92□□□□□ -1.46
BRCA2P51587 AL049779.3-201ENST00000557141 606 ntBASIC5.92□□□□□ -1.46
BRCA2P51587 AC011944.2-201ENST00000624440 683 ntBASIC5.92□□□□□ -1.46
BRCA2P51587 VCAN-208ENST00000512590 5923 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
BRCA2P51587 ADAMTS9-AS2-201ENST00000460833 3691 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
BRCA2P51587 B3GALT1-201ENST00000392690 5094 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
BRCA2P51587 TNC-202ENST00000350763 7641 ntAPPRIS P2 TSL 1 (best) BASIC5.91□□□□□ -1.46
BRCA2P51587 DSG3-201ENST00000257189 5525 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
BRCA2P51587 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
BRCA2P51587 NRK-201ENST00000243300 8062 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
BRCA2P51587 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC5.91□□□□□ -1.46
BRCA2P51587 MIR640-201ENST00000385086 96 ntBASIC5.91□□□□□ -1.46
BRCA2P51587 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC5.91□□□□□ -1.46
BRCA2P51587 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC5.91□□□□□ -1.46
BRCA2P51587 BZW1P1-201ENST00000454901 1240 ntBASIC5.91□□□□□ -1.46
BRCA2P51587 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC5.91□□□□□ -1.46
BRCA2P51587 AC005377.1-201ENST00000605126 456 ntBASIC5.91□□□□□ -1.46
BRCA2P51587 MTCO1P1-201ENST00000624263 1081 ntBASIC5.91□□□□□ -1.46
BRCA2P51587 ATP7B-201ENST00000242839 6638 ntAPPRIS P3 TSL 1 (best) BASIC5.91□□□□□ -1.46
BRCA2P51587 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC5.91□□□□□ -1.46
BRCA2P51587 CCBE1-201ENST00000398179 5979 ntTSL 5 BASIC5.91□□□□□ -1.46
BRCA2P51587 DCAF5-205ENST00000554215 4803 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
BRCA2P51587 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC5.91□□□□□ -1.46
BRCA2P51587 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
BRCA2P51587 RRN3-202ENST00000327307 2039 ntTSL 2 BASIC5.91□□□□□ -1.46
BRCA2P51587 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC5.91□□□□□ -1.46
BRCA2P51587 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC5.91□□□□□ -1.46
BRCA2P51587 KIAA1328-207ENST00000591619 5881 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
BRCA2P51587 RNU4-25P-201ENST00000410569 230 ntBASIC5.91□□□□□ -1.46
BRCA2P51587 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC5.91□□□□□ -1.46
BRCA2P51587 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC5.91□□□□□ -1.46
BRCA2P51587 AKR1C2-203ENST00000455190 1098 ntTSL 2 BASIC5.91□□□□□ -1.46
BRCA2P51587 AC109327.1-201ENST00000471666 403 ntBASIC5.91□□□□□ -1.46
BRCA2P51587 STK26-205ENST00000496850 1186 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
BRCA2P51587 AC114956.1-201ENST00000504277 512 ntTSL 5 BASIC5.91□□□□□ -1.46
BRCA2P51587 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC5.91□□□□□ -1.46
BRCA2P51587 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC5.91□□□□□ -1.46
BRCA2P51587 AC024941.1-201ENST00000612250 334 ntBASIC5.91□□□□□ -1.46
BRCA2P51587 PIGN-251ENST00000640876 6045 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
BRCA2P51587 ABL2-204ENST00000502732 12144 ntAPPRIS P3 TSL 1 (best) BASIC5.91□□□□□ -1.46
BRCA2P51587 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC5.91□□□□□ -1.46
BRCA2P51587 NAV2-208ENST00000527559 11171 ntTSL 5 BASIC5.91□□□□□ -1.46
BRCA2P51587 VPS8-210ENST00000446204 4721 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
BRCA2P51587 LRRC37A3-202ENST00000334962 2654 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 102.1 ms