Protein–RNA interactions for Protein: P45973

CBX5, Chromobox protein homolog 5, humanhuman

Predictions only

Length 191 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX5P45973 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
CBX5P45973 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CBX5P45973 PAGE4-201ENST00000218068 499 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CBX5P45973 SMR3B-201ENST00000304915 785 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CBX5P45973 S100A7-202ENST00000368723 479 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CBX5P45973 STMN1-202ENST00000374291 867 ntAPPRIS P1 TSL 2 BASIC5.03□□□□□ -1.6
CBX5P45973 PLIN2-203ENST00000380465 631 ntTSL 2 BASIC5.03□□□□□ -1.6
CBX5P45973 SNORA7A-201ENST00000384765 139 ntBASIC5.03□□□□□ -1.6
CBX5P45973 MIR301B-201ENST00000390813 78 ntBASIC5.03□□□□□ -1.6
CBX5P45973 AL139100.1-201ENST00000408001 498 ntBASIC5.03□□□□□ -1.6
CBX5P45973 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC5.03□□□□□ -1.6
CBX5P45973 LINC01031-201ENST00000420807 779 ntTSL 3 BASIC5.03□□□□□ -1.6
CBX5P45973 ELOBP4-201ENST00000423418 296 ntBASIC5.03□□□□□ -1.6
CBX5P45973 VN1R21P-201ENST00000426703 765 ntBASIC5.03□□□□□ -1.6
CBX5P45973 AC106874.1-201ENST00000440495 646 ntTSL 3 BASIC5.03□□□□□ -1.6
CBX5P45973 RPS10P14-201ENST00000440748 502 ntBASIC5.03□□□□□ -1.6
CBX5P45973 HMGB3P9-201ENST00000441799 583 ntBASIC5.03□□□□□ -1.6
CBX5P45973 BMS1P11-201ENST00000442351 885 ntBASIC5.03□□□□□ -1.6
CBX5P45973 OR2L9P-201ENST00000444456 913 ntBASIC5.03□□□□□ -1.6
CBX5P45973 AC113331.2-201ENST00000445557 926 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
CBX5P45973 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CBX5P45973 LINC01809-201ENST00000448431 303 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CBX5P45973 MAGI2-AS3-210ENST00000448636 798 ntTSL 5 BASIC5.03□□□□□ -1.6
CBX5P45973 AL133351.3-201ENST00000454998 193 ntBASIC5.03□□□□□ -1.6
CBX5P45973 BMS1P9-201ENST00000457640 885 ntBASIC5.03□□□□□ -1.6
CBX5P45973 LINC01006-207ENST00000458645 738 ntTSL 4 BASIC5.03□□□□□ -1.6
CBX5P45973 RNU1-88P-201ENST00000459274 128 ntBASIC5.03□□□□□ -1.6
CBX5P45973 AC011396.3-201ENST00000508845 512 ntTSL 3 BASIC5.03□□□□□ -1.6
CBX5P45973 LINC02512-201ENST00000509548 429 ntTSL 5 BASIC5.03□□□□□ -1.6
CBX5P45973 LINC02196-201ENST00000512838 568 ntTSL 4 BASIC5.03□□□□□ -1.6
CBX5P45973 HMGB1P19-201ENST00000517578 577 ntBASIC5.03□□□□□ -1.6
CBX5P45973 AC008601.1-201ENST00000519892 527 ntTSL 4 BASIC5.03□□□□□ -1.6
CBX5P45973 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC5.03□□□□□ -1.6
CBX5P45973 AP001893.1-201ENST00000532866 362 ntTSL 5 BASIC5.03□□□□□ -1.6
CBX5P45973 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC5.03□□□□□ -1.6
CBX5P45973 AC006065.4-204ENST00000537478 654 ntTSL 2 BASIC5.03□□□□□ -1.6
CBX5P45973 AC006065.4-203ENST00000541065 526 ntTSL 2 BASIC5.03□□□□□ -1.6
CBX5P45973 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC5.03□□□□□ -1.6
CBX5P45973 AC079600.3-201ENST00000547898 447 ntTSL 5 BASIC5.03□□□□□ -1.6
CBX5P45973 AC078778.2-201ENST00000553061 567 ntTSL 5 BASIC5.03□□□□□ -1.6
CBX5P45973 CHEK2P2-201ENST00000554701 672 ntBASIC5.03□□□□□ -1.6
CBX5P45973 AC020704.1-201ENST00000559394 454 ntTSL 3 BASIC5.03□□□□□ -1.6
CBX5P45973 AC018946.1-201ENST00000560578 458 ntTSL 5 BASIC5.03□□□□□ -1.6
CBX5P45973 MIR9-3HG-211ENST00000561037 779 ntTSL 5 BASIC5.03□□□□□ -1.6
CBX5P45973 AC016383.1-201ENST00000582700 714 ntTSL 3 BASIC5.03□□□□□ -1.6
CBX5P45973 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC5.03□□□□□ -1.6
CBX5P45973 AL133406.3-201ENST00000606817 541 ntBASIC5.03□□□□□ -1.6
CBX5P45973 AC022106.1-201ENST00000612834 766 ntBASIC5.03□□□□□ -1.6
CBX5P45973 MIR6726-201ENST00000613751 61 ntBASIC5.03□□□□□ -1.6
CBX5P45973 CCL15-204ENST00000617897 1073 ntAPPRIS P2 TSL 1 (best) BASIC5.03□□□□□ -1.6
CBX5P45973 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC5.03□□□□□ -1.6
CBX5P45973 AC022400.9-201ENST00000623633 273 ntBASIC5.03□□□□□ -1.6
CBX5P45973 AC117503.3-201ENST00000623811 601 ntBASIC5.03□□□□□ -1.6
CBX5P45973 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC5.03□□□□□ -1.6
CBX5P45973 AL133243.2-201ENST00000610331 1621 ntBASIC5.03□□□□□ -1.6
CBX5P45973 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
CBX5P45973 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC5.03□□□□□ -1.6
CBX5P45973 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CBX5P45973 AL034370.1-201ENST00000397254 1590 ntBASIC5.03□□□□□ -1.6
CBX5P45973 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC5.02□□□□□ -1.61
CBX5P45973 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC5.02□□□□□ -1.61
CBX5P45973 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CBX5P45973 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC5.02□□□□□ -1.61
CBX5P45973 RRH-201ENST00000317735 1455 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
CBX5P45973 OOSP2-201ENST00000278855 1633 ntAPPRIS P2 TSL 1 (best) BASIC5.02□□□□□ -1.61
CBX5P45973 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC5.02□□□□□ -1.61
CBX5P45973 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC5.02□□□□□ -1.61
CBX5P45973 KARSP1-201ENST00000451871 1752 ntBASIC5.02□□□□□ -1.61
CBX5P45973 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CBX5P45973 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CBX5P45973 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CBX5P45973 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CBX5P45973 KRTAP19-6-201ENST00000334046 330 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
CBX5P45973 RN7SKP185-201ENST00000362813 326 ntBASIC5.02□□□□□ -1.61
CBX5P45973 RNA5SP485-201ENST00000365053 119 ntBASIC5.02□□□□□ -1.61
CBX5P45973 TRAV10-201ENST00000390432 379 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
CBX5P45973 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
CBX5P45973 AL139135.1-201ENST00000412675 209 ntBASIC5.02□□□□□ -1.61
CBX5P45973 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC5.02□□□□□ -1.61
CBX5P45973 AL360013.1-201ENST00000419031 858 ntBASIC5.02□□□□□ -1.61
CBX5P45973 NMD3P2-201ENST00000421815 761 ntBASIC5.02□□□□□ -1.61
CBX5P45973 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC5.02□□□□□ -1.61
CBX5P45973 AC099677.3-201ENST00000427081 395 ntBASIC5.02□□□□□ -1.61
CBX5P45973 AC104076.1-201ENST00000428080 265 ntTSL 3 BASIC5.02□□□□□ -1.61
CBX5P45973 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC5.02□□□□□ -1.61
CBX5P45973 AL022337.1-201ENST00000434510 357 ntTSL 3 BASIC5.02□□□□□ -1.61
CBX5P45973 AC016027.4-201ENST00000450866 277 ntBASIC5.02□□□□□ -1.61
CBX5P45973 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC5.02□□□□□ -1.61
CBX5P45973 RARRES2P3-201ENST00000457739 473 ntBASIC5.02□□□□□ -1.61
CBX5P45973 AC104164.1-201ENST00000460282 590 ntBASIC5.02□□□□□ -1.61
CBX5P45973 RPS4XP17-201ENST00000479057 754 ntBASIC5.02□□□□□ -1.61
CBX5P45973 RPL5P33-201ENST00000487833 905 ntBASIC5.02□□□□□ -1.61
CBX5P45973 RN7SL104P-201ENST00000498686 293 ntBASIC5.02□□□□□ -1.61
CBX5P45973 AC105391.1-201ENST00000503155 1045 ntBASIC5.02□□□□□ -1.61
CBX5P45973 LINC02502-201ENST00000505122 642 ntTSL 4 BASIC5.02□□□□□ -1.61
CBX5P45973 AC139491.3-201ENST00000509643 684 ntTSL 3 BASIC5.02□□□□□ -1.61
CBX5P45973 AC140125.1-201ENST00000515739 684 ntTSL 5 BASIC5.02□□□□□ -1.61
CBX5P45973 RNA5SP360-201ENST00000516555 118 ntBASIC5.02□□□□□ -1.61
CBX5P45973 AC008708.1-201ENST00000517346 474 ntTSL 3 BASIC5.02□□□□□ -1.61
CBX5P45973 ODF1-202ENST00000518835 368 ntTSL 3 BASIC5.02□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 134.4 ms