Protein–RNA interactions for Protein: P40939

HADHA, Trifunctional enzyme subunit alpha, mitochondrial, humanhuman

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHAP40939 CCDC60-203ENST00000536742 886 ntAPPRIS ALT2 TSL 2 BASIC6.1□□□□□ -1.43
HADHAP40939 AC006512.2-201ENST00000543250 486 ntBASIC6.1□□□□□ -1.43
HADHAP40939 AP000619.2-201ENST00000546014 969 ntBASIC6.1□□□□□ -1.43
HADHAP40939 LINC01580-202ENST00000555364 661 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
HADHAP40939 LINC01579-205ENST00000556447 791 ntTSL 4 BASIC6.1□□□□□ -1.43
HADHAP40939 MORF4L1-205ENST00000558502 855 ntTSL 3 BASIC6.1□□□□□ -1.43
HADHAP40939 ZNF174-204ENST00000572544 1002 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
HADHAP40939 AC134669.1-201ENST00000581275 672 ntBASIC6.1□□□□□ -1.43
HADHAP40939 MIR4701-201ENST00000583094 63 ntBASIC6.1□□□□□ -1.43
HADHAP40939 TRIM37-212ENST00000584889 353 ntTSL 2 BASIC6.1□□□□□ -1.43
HADHAP40939 BX322635.1-201ENST00000605804 496 ntBASIC6.1□□□□□ -1.43
HADHAP40939 AC008833.1-201ENST00000611633 691 ntBASIC6.1□□□□□ -1.43
HADHAP40939 FAM27E2-201ENST00000619668 403 ntBASIC6.1□□□□□ -1.43
HADHAP40939 AC015660.5-201ENST00000623238 564 ntBASIC6.1□□□□□ -1.43
HADHAP40939 PRKCH-228ENST00000640011 285 ntTSL 5 BASIC6.1□□□□□ -1.43
HADHAP40939 FAM205BP-203ENST00000455647 3752 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
HADHAP40939 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
HADHAP40939 AC097063.1-201ENST00000426714 1797 ntBASIC6.1□□□□□ -1.43
HADHAP40939 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
HADHAP40939 C4orf36-203ENST00000473559 2306 ntAPPRIS P1 TSL 2 BASIC6.1□□□□□ -1.43
HADHAP40939 FCGR3B-208ENST00000613418 2251 ntTSL 5 BASIC6.1□□□□□ -1.43
HADHAP40939 CHD2-202ENST00000420239 2221 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
HADHAP40939 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC6.1□□□□□ -1.43
HADHAP40939 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC6.09□□□□□ -1.43
HADHAP40939 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
HADHAP40939 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC6.09□□□□□ -1.43
HADHAP40939 AC133552.1-201ENST00000569988 4007 ntBASIC6.09□□□□□ -1.43
HADHAP40939 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
HADHAP40939 ALB-214ENST00000509063 1911 ntTSL 5 BASIC6.09□□□□□ -1.43
HADHAP40939 FOXP2-202ENST00000360232 1412 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
HADHAP40939 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC6.09□□□□□ -1.43
HADHAP40939 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
HADHAP40939 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
HADHAP40939 RAD17-201ENST00000282891 2135 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
HADHAP40939 RN7SKP128-201ENST00000364270 303 ntBASIC6.09□□□□□ -1.43
HADHAP40939 RNA5SP279-201ENST00000365513 117 ntBASIC6.09□□□□□ -1.43
HADHAP40939 TPT1-204ENST00000379060 764 ntTSL 5 BASIC6.09□□□□□ -1.43
HADHAP40939 AC117402.1-202ENST00000383686 820 ntTSL 2 BASIC6.09□□□□□ -1.43
HADHAP40939 MYL6P5-201ENST00000412707 459 ntBASIC6.09□□□□□ -1.43
HADHAP40939 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC6.09□□□□□ -1.43
HADHAP40939 MS4A6A-202ENST00000420732 863 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
HADHAP40939 REREP1Y-201ENST00000422655 198 ntBASIC6.09□□□□□ -1.43
HADHAP40939 KIF4CP-201ENST00000422742 1279 ntBASIC6.09□□□□□ -1.43
HADHAP40939 AC092651.1-201ENST00000426110 312 ntBASIC6.09□□□□□ -1.43
HADHAP40939 ZEB2-AS1-203ENST00000428623 436 ntTSL 2 BASIC6.09□□□□□ -1.43
HADHAP40939 ISM1-AS1-201ENST00000431407 652 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
HADHAP40939 TRIM60P13-201ENST00000432350 1283 ntBASIC6.09□□□□□ -1.43
HADHAP40939 FTLP19-201ENST00000433300 394 ntBASIC6.09□□□□□ -1.43
HADHAP40939 KRT8P51-201ENST00000438938 274 ntBASIC6.09□□□□□ -1.43
HADHAP40939 REREP2Y-201ENST00000439103 200 ntBASIC6.09□□□□□ -1.43
HADHAP40939 LINC00380-201ENST00000442478 353 ntTSL 2 BASIC6.09□□□□□ -1.43
HADHAP40939 RPL5P7-201ENST00000444235 813 ntBASIC6.09□□□□□ -1.43
HADHAP40939 MTND3P4-201ENST00000453537 303 ntBASIC6.09□□□□□ -1.43
HADHAP40939 AC239798.3-201ENST00000454459 408 ntBASIC6.09□□□□□ -1.43
HADHAP40939 PFN2-209ENST00000481275 560 ntTSL 4 BASIC6.09□□□□□ -1.43
HADHAP40939 LYRM4-208ENST00000500576 592 ntTSL 2 BASIC6.09□□□□□ -1.43
HADHAP40939 CCDC11P1-201ENST00000503137 1162 ntBASIC6.09□□□□□ -1.43
HADHAP40939 AC104779.1-201ENST00000503557 441 ntTSL 3 BASIC6.09□□□□□ -1.43
HADHAP40939 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC6.09□□□□□ -1.43
HADHAP40939 LINC02503-201ENST00000510505 812 ntTSL 2 BASIC6.09□□□□□ -1.43
HADHAP40939 IGKV2-19-201ENST00000518132 283 ntBASIC6.09□□□□□ -1.43
HADHAP40939 AC104997.1-201ENST00000519761 717 ntBASIC6.09□□□□□ -1.43
HADHAP40939 AP003501.1-201ENST00000524453 744 ntTSL 3 BASIC6.09□□□□□ -1.43
HADHAP40939 CCND2-AS2-201ENST00000537370 495 ntTSL 4 BASIC6.09□□□□□ -1.43
HADHAP40939 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC6.09□□□□□ -1.43
HADHAP40939 AC244502.2-201ENST00000543361 851 ntBASIC6.09□□□□□ -1.43
HADHAP40939 LINC02420-201ENST00000543387 741 ntTSL 5 BASIC6.09□□□□□ -1.43
HADHAP40939 AC090888.3-201ENST00000558917 509 ntBASIC6.09□□□□□ -1.43
HADHAP40939 MRPS21P8-201ENST00000569196 235 ntBASIC6.09□□□□□ -1.43
HADHAP40939 AC009121.2-202ENST00000572706 505 ntTSL 3 BASIC6.09□□□□□ -1.43
HADHAP40939 AC007014.1-201ENST00000572828 610 ntTSL 3 BASIC6.09□□□□□ -1.43
HADHAP40939 AC104984.2-201ENST00000582938 385 ntTSL 3 BASIC6.09□□□□□ -1.43
HADHAP40939 LINC01533-204ENST00000590719 435 ntTSL 5 BASIC6.09□□□□□ -1.43
HADHAP40939 AC006115.2-201ENST00000596823 202 ntBASIC6.09□□□□□ -1.43
HADHAP40939 AC008750.7-201ENST00000600765 559 ntTSL 4 BASIC6.09□□□□□ -1.43
HADHAP40939 AC079315.1-201ENST00000602952 623 ntBASIC6.09□□□□□ -1.43
HADHAP40939 AC084036.1-201ENST00000609190 508 ntBASIC6.09□□□□□ -1.43
HADHAP40939 AC092681.3-201ENST00000609463 678 ntBASIC6.09□□□□□ -1.43
HADHAP40939 AC026367.3-201ENST00000619032 590 ntBASIC6.09□□□□□ -1.43
HADHAP40939 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC6.09□□□□□ -1.43
HADHAP40939 AL080276.2-201ENST00000637995 2090 ntTSL 3 BASIC6.09□□□□□ -1.43
HADHAP40939 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC6.09□□□□□ -1.43
HADHAP40939 AL137141.1-201ENST00000624622 4836 ntBASIC6.09□□□□□ -1.43
HADHAP40939 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
HADHAP40939 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
HADHAP40939 GRIK1-201ENST00000327783 3179 ntTSL 5 BASIC6.09□□□□□ -1.43
HADHAP40939 THAP12P9-201ENST00000503971 2360 ntBASIC6.09□□□□□ -1.43
HADHAP40939 AC018717.1-201ENST00000457712 1505 ntBASIC6.09□□□□□ -1.44
HADHAP40939 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC6.09□□□□□ -1.44
HADHAP40939 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC6.09□□□□□ -1.44
HADHAP40939 ING3-204ENST00000431467 1447 ntTSL 2 BASIC6.08□□□□□ -1.44
HADHAP40939 P2RY14-202ENST00000424796 1780 ntAPPRIS P1 TSL 2 BASIC6.08□□□□□ -1.44
HADHAP40939 AC109811.1-201ENST00000512833 2807 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
HADHAP40939 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
HADHAP40939 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC6.08□□□□□ -1.44
HADHAP40939 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
HADHAP40939 TCF12-214ENST00000559710 1314 ntTSL 2 BASIC6.08□□□□□ -1.44
HADHAP40939 OR4C11-201ENST00000302231 1045 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
HADHAP40939 OR5T3-201ENST00000303059 1023 ntBASIC6.08□□□□□ -1.44
HADHAP40939 RNU1-134P-201ENST00000362935 165 ntBASIC6.08□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 73.4 ms