Protein–RNA interactions for Protein: P29400

COL4A5, Collagen alpha-5(IV) chain, humanhuman

Predictions only

Length 1,685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5P29400 KAT6A-203ENST00000406337 9241 ntAPPRIS P3 TSL 5 BASIC6.63□□□□□ -1.35
COL4A5P29400 KIAA0586-201ENST00000261244 4807 ntAPPRIS P3 TSL 1 (best) BASIC6.63□□□□□ -1.35
COL4A5P29400 KDM5A-201ENST00000399788 10763 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
COL4A5P29400 SELE-201ENST00000333360 3857 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
COL4A5P29400 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC6.63□□□□□ -1.35
COL4A5P29400 SLC17A2-203ENST00000377850 2524 ntAPPRIS ALT2 TSL 5 BASIC6.63□□□□□ -1.35
COL4A5P29400 INTS6P1-201ENST00000504674 2530 ntBASIC6.63□□□□□ -1.35
COL4A5P29400 NUDT13-206ENST00000537969 2151 ntTSL 2 BASIC6.63□□□□□ -1.35
COL4A5P29400 TBCK-201ENST00000273980 8101 ntAPPRIS P1 TSL 5 BASIC6.63□□□□□ -1.35
COL4A5P29400 VCAN-208ENST00000512590 5923 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
COL4A5P29400 ZNF43-205ENST00000594012 5584 ntAPPRIS ALT2 TSL 2 BASIC6.63□□□□□ -1.35
COL4A5P29400 KAT7-201ENST00000259021 9644 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
COL4A5P29400 SNORD8-201ENST00000363915 110 ntBASIC6.62□□□□□ -1.35
COL4A5P29400 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC6.62□□□□□ -1.35
COL4A5P29400 AC096741.1-201ENST00000472250 846 ntBASIC6.62□□□□□ -1.35
COL4A5P29400 JCHAIN-204ENST00000510437 640 ntAPPRIS P1 TSL 3 BASIC6.62□□□□□ -1.35
COL4A5P29400 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC6.62□□□□□ -1.35
COL4A5P29400 AL133410.1-201ENST00000574939 546 ntTSL 3 BASIC6.62□□□□□ -1.35
COL4A5P29400 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC6.62□□□□□ -1.35
COL4A5P29400 AC095055.1-201ENST00000603472 1113 ntBASIC6.62□□□□□ -1.35
COL4A5P29400 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC6.62□□□□□ -1.35
COL4A5P29400 AC004836.1-201ENST00000623032 634 ntBASIC6.62□□□□□ -1.35
COL4A5P29400 LINC01359-206ENST00000634775 888 ntTSL 5 BASIC6.62□□□□□ -1.35
COL4A5P29400 AC002429.2-202ENST00000637269 394 ntAPPRIS P1 TSL 3 BASIC6.62□□□□□ -1.35
COL4A5P29400 MEF2C-210ENST00000506554 3469 ntTSL 5 BASIC6.62□□□□□ -1.35
COL4A5P29400 LRBA-209ENST00000510413 10032 ntAPPRIS ALT2 TSL 1 (best) BASIC6.62□□□□□ -1.35
COL4A5P29400 AL353796.1-201ENST00000561542 3241 ntBASIC6.62□□□□□ -1.35
COL4A5P29400 USP6-201ENST00000250066 7976 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
COL4A5P29400 FSCB-201ENST00000340446 2938 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
COL4A5P29400 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC6.62□□□□□ -1.35
COL4A5P29400 AC092821.2-201ENST00000545710 2042 ntBASIC6.62□□□□□ -1.35
COL4A5P29400 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
COL4A5P29400 CAST-203ENST00000338252 2972 ntAPPRIS ALT2 TSL 1 (best) BASIC6.62□□□□□ -1.35
COL4A5P29400 NPL-201ENST00000258317 2461 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
COL4A5P29400 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC6.61□□□□□ -1.35
COL4A5P29400 GSTM5P1-201ENST00000434751 660 ntBASIC6.61□□□□□ -1.35
COL4A5P29400 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC6.61□□□□□ -1.35
COL4A5P29400 LINC01456-201ENST00000453902 708 ntTSL 3 BASIC6.61□□□□□ -1.35
COL4A5P29400 RPS7P6-201ENST00000485777 579 ntBASIC6.61□□□□□ -1.35
COL4A5P29400 HMGB1P44-201ENST00000508597 572 ntBASIC6.61□□□□□ -1.35
COL4A5P29400 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC6.61□□□□□ -1.35
COL4A5P29400 IGHVIII-13-1-201ENST00000517613 291 ntBASIC6.61□□□□□ -1.35
COL4A5P29400 DUXA-201ENST00000554048 1006 ntAPPRIS P1 TSL 3 BASIC6.61□□□□□ -1.35
COL4A5P29400 AP005403.1-201ENST00000579720 229 ntBASIC6.61□□□□□ -1.35
COL4A5P29400 AC005757.1-201ENST00000591432 472 ntTSL 4 BASIC6.61□□□□□ -1.35
COL4A5P29400 SERPINB10-204ENST00000619595 1194 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
COL4A5P29400 AL353662.3-201ENST00000625131 237 ntBASIC6.61□□□□□ -1.35
COL4A5P29400 MEIS1-201ENST00000272369 4291 ntAPPRIS P2 TSL 1 (best) BASIC6.61□□□□□ -1.35
COL4A5P29400 USP37-201ENST00000258399 8032 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
COL4A5P29400 LINC01720-201ENST00000413356 2216 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
COL4A5P29400 APOB-201ENST00000233242 14121 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
COL4A5P29400 CLEC6A-201ENST00000382073 1682 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
COL4A5P29400 LIMD1-201ENST00000273317 11331 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
COL4A5P29400 IL1RAP-202ENST00000317757 5413 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
COL4A5P29400 IARS-213ENST00000627121 4587 ntTSL 5 BASIC6.61□□□□□ -1.35
COL4A5P29400 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
COL4A5P29400 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC6.61□□□□□ -1.35
COL4A5P29400 RNF4-214ENST00000511600 4123 ntAPPRIS P1 TSL 2 BASIC6.61□□□□□ -1.35
COL4A5P29400 FCHSD2-201ENST00000311172 4340 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
COL4A5P29400 AC131649.2-201ENST00000624925 4439 ntBASIC6.61□□□□□ -1.35
COL4A5P29400 HYAL4-201ENST00000223026 2407 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
COL4A5P29400 PLEKHG4B-204ENST00000637938 12612 ntAPPRIS ALT2 TSL 5 BASIC6.61□□□□□ -1.35
COL4A5P29400 RNU1-146P-201ENST00000364015 165 ntBASIC6.61□□□□□ -1.35
COL4A5P29400 AC116036.1-201ENST00000412199 367 ntBASIC6.61□□□□□ -1.35
COL4A5P29400 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC6.61□□□□□ -1.35
COL4A5P29400 AC211486.3-201ENST00000412694 621 ntBASIC6.61□□□□□ -1.35
COL4A5P29400 TEX41-205ENST00000431734 529 ntTSL 4 BASIC6.61□□□□□ -1.35
COL4A5P29400 HCG14-201ENST00000444986 413 ntTSL 2 BASIC6.61□□□□□ -1.35
COL4A5P29400 TRBV5-2-201ENST00000489095 273 ntBASIC6.61□□□□□ -1.35
COL4A5P29400 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
COL4A5P29400 CSNK1A1P3-201ENST00000504105 330 ntBASIC6.61□□□□□ -1.35
COL4A5P29400 AC074050.1-201ENST00000563247 211 ntBASIC6.61□□□□□ -1.35
COL4A5P29400 AP000769.2-201ENST00000602344 396 ntBASIC6.61□□□□□ -1.35
COL4A5P29400 AC137695.1-201ENST00000604126 489 ntBASIC6.61□□□□□ -1.35
COL4A5P29400 AL627230.1-201ENST00000613077 211 ntBASIC6.61□□□□□ -1.35
COL4A5P29400 AL591926.8-201ENST00000616876 211 ntBASIC6.61□□□□□ -1.35
COL4A5P29400 FLJ12825-201ENST00000515617 3942 ntTSL 2 BASIC6.61□□□□□ -1.35
COL4A5P29400 AC022819.1-201ENST00000563495 3910 ntBASIC6.61□□□□□ -1.35
COL4A5P29400 AC114876.1-201ENST00000490962 1366 ntBASIC6.61□□□□□ -1.35
COL4A5P29400 CASC19-221ENST00000641309 1382 ntBASIC6.61□□□□□ -1.35
COL4A5P29400 MBNL2-201ENST00000343600 4596 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
COL4A5P29400 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
COL4A5P29400 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
COL4A5P29400 AL034546.1-201ENST00000623740 3693 ntBASIC6.6□□□□□ -1.35
COL4A5P29400 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
COL4A5P29400 MAT2B-201ENST00000280969 2226 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
COL4A5P29400 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
COL4A5P29400 AC019197.1-202ENST00000414885 2639 ntTSL 5 BASIC6.6□□□□□ -1.35
COL4A5P29400 C5orf64-203ENST00000505642 2970 ntTSL 2 BASIC6.6□□□□□ -1.35
COL4A5P29400 TGFBR3-207ENST00000525962 3927 ntAPPRIS P3 TSL 1 (best) BASIC6.6□□□□□ -1.35
COL4A5P29400 DDX58-202ENST00000379883 4353 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
COL4A5P29400 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC6.6□□□□□ -1.35
COL4A5P29400 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC6.6□□□□□ -1.35
COL4A5P29400 SVEP1-202ENST00000374469 12194 ntAPPRIS P2 TSL 5 BASIC6.6□□□□□ -1.35
COL4A5P29400 MYH15-201ENST00000273353 7074 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
COL4A5P29400 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
COL4A5P29400 CASP8-203ENST00000323492 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC6.6□□□□□ -1.35
COL4A5P29400 FBXO40-201ENST00000338040 5929 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
COL4A5P29400 CREM-202ENST00000342105 1541 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
COL4A5P29400 ZRANB1-201ENST00000359653 5695 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 83.9 ms