Protein–RNA interactions for Protein: P28827

PTPRM, Receptor-type tyrosine-protein phosphatase mu, humanhuman

Predictions only

Length 1,452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRMP28827 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC8.26□□□□□ -1.09
PTPRMP28827 AC027334.1-201ENST00000603257 310 ntBASIC8.26□□□□□ -1.09
PTPRMP28827 DLEU1_1.1-201ENST00000618107 190 ntBASIC8.26□□□□□ -1.09
PTPRMP28827 OR1S2-202ENST00000641683 941 ntAPPRIS P1 BASIC8.26□□□□□ -1.09
PTPRMP28827 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC8.25□□□□□ -1.09
PTPRMP28827 MYPN-201ENST00000354393 4596 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
PTPRMP28827 FOCAD-216ENST00000605086 4195 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
PTPRMP28827 MGAM-209ENST00000620571 6483 ntTSL 5 BASIC8.25□□□□□ -1.09
PTPRMP28827 PARN-201ENST00000341484 2100 ntTSL 2 BASIC8.25□□□□□ -1.09
PTPRMP28827 BDNF-207ENST00000395986 3979 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
PTPRMP28827 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC8.25□□□□□ -1.09
PTPRMP28827 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC8.25□□□□□ -1.09
PTPRMP28827 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC8.25□□□□□ -1.09
PTPRMP28827 KAT6A-203ENST00000406337 9241 ntAPPRIS P3 TSL 5 BASIC8.25□□□□□ -1.09
PTPRMP28827 IFT74-204ENST00000443698 2163 ntAPPRIS P1 TSL 5 BASIC8.25□□□□□ -1.09
PTPRMP28827 AC006213.6-201ENST00000623722 4179 ntBASIC8.25□□□□□ -1.09
PTPRMP28827 CA5B-201ENST00000318636 6835 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
PTPRMP28827 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC8.25□□□□□ -1.09
PTPRMP28827 CCAR1-201ENST00000265872 4683 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
PTPRMP28827 OR10A2-201ENST00000307322 1053 ntAPPRIS P1 BASIC8.25□□□□□ -1.09
PTPRMP28827 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC8.25□□□□□ -1.09
PTPRMP28827 HNMT-203ENST00000329366 835 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
PTPRMP28827 FHIT-201ENST00000341848 174 ntTSL 3 BASIC8.25□□□□□ -1.09
PTPRMP28827 CATSPER2P1-205ENST00000446479 419 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
PTPRMP28827 AL022319.1-201ENST00000458183 1167 ntBASIC8.25□□□□□ -1.09
PTPRMP28827 snoU13.20-201ENST00000459180 104 ntBASIC8.25□□□□□ -1.09
PTPRMP28827 KRTAP5-14P-201ENST00000502328 121 ntBASIC8.25□□□□□ -1.09
PTPRMP28827 LINC02218-201ENST00000503267 529 ntTSL 2 BASIC8.25□□□□□ -1.09
PTPRMP28827 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC8.25□□□□□ -1.09
PTPRMP28827 AC124854.1-201ENST00000512210 511 ntTSL 3 BASIC8.25□□□□□ -1.09
PTPRMP28827 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC8.25□□□□□ -1.09
PTPRMP28827 ARL1-211ENST00000551828 776 ntTSL 5 BASIC8.25□□□□□ -1.09
PTPRMP28827 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC8.25□□□□□ -1.09
PTPRMP28827 BNIP3P5-201ENST00000562290 498 ntBASIC8.25□□□□□ -1.09
PTPRMP28827 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC8.25□□□□□ -1.09
PTPRMP28827 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC8.25□□□□□ -1.09
PTPRMP28827 GJC1-202ENST00000426548 7640 ntAPPRIS P1 TSL 3 BASIC8.24□□□□□ -1.09
PTPRMP28827 DSCAM-203ENST00000617870 6176 ntTSL 5 BASIC8.24□□□□□ -1.09
PTPRMP28827 EOGT-208ENST00000540764 1584 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
PTPRMP28827 AL117339.5-201ENST00000640275 3955 ntAPPRIS P1 TSL 5 BASIC8.24□□□□□ -1.09
PTPRMP28827 LARS-201ENST00000274562 2213 ntTSL 2 BASIC8.24□□□□□ -1.09
PTPRMP28827 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC8.24□□□□□ -1.09
PTPRMP28827 AC060780.1-202ENST00000590740 5084 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
PTPRMP28827 TMED8-201ENST00000216468 7784 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
PTPRMP28827 CPED1-206ENST00000450913 2501 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
PTPRMP28827 AP000866.6-201ENST00000638898 3579 ntBASIC8.24□□□□□ -1.09
PTPRMP28827 SPTAN1-222ENST00000630804 7812 ntTSL 5 BASIC8.24□□□□□ -1.09
PTPRMP28827 LINC01814-202ENST00000454224 8839 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
PTPRMP28827 CAMK2D-202ENST00000342666 1940 ntTSL 5 BASIC8.24□□□□□ -1.09
PTPRMP28827 RN7SKP126-201ENST00000411143 300 ntBASIC8.24□□□□□ -1.09
PTPRMP28827 AC211486.3-201ENST00000412694 621 ntBASIC8.24□□□□□ -1.09
PTPRMP28827 LDHAP2-201ENST00000437325 985 ntBASIC8.24□□□□□ -1.09
PTPRMP28827 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC8.24□□□□□ -1.09
PTPRMP28827 AL035690.1-201ENST00000490892 383 ntBASIC8.24□□□□□ -1.09
PTPRMP28827 E2F5-204ENST00000517476 1094 ntTSL 2 BASIC8.24□□□□□ -1.09
PTPRMP28827 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC8.24□□□□□ -1.09
PTPRMP28827 AC009117.1-201ENST00000563948 554 ntBASIC8.24□□□□□ -1.09
PTPRMP28827 MIR4284-201ENST00000578924 81 ntBASIC8.24□□□□□ -1.09
PTPRMP28827 AC098617.1-205ENST00000595918 1032 ntTSL 5 BASIC8.24□□□□□ -1.09
PTPRMP28827 SORBS1-203ENST00000354106 3015 ntAPPRIS ALT2 TSL 5 BASIC8.24□□□□□ -1.09
PTPRMP28827 AC132825.1-201ENST00000463573 2247 ntBASIC8.24□□□□□ -1.09
PTPRMP28827 FBXW7-203ENST00000296555 3572 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
PTPRMP28827 NFIB-204ENST00000380953 2381 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
PTPRMP28827 AL357153.1-201ENST00000500016 2941 ntTSL 2 BASIC8.24□□□□□ -1.09
PTPRMP28827 NUP107-201ENST00000229179 6457 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
PTPRMP28827 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
PTPRMP28827 FANCD2-205ENST00000431693 2450 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
PTPRMP28827 ASPM-203ENST00000367409 10887 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
PTPRMP28827 AXDND1-201ENST00000367618 3642 ntAPPRIS P2 TSL 1 (best) BASIC8.23□□□□□ -1.09
PTPRMP28827 AC119674.1-213ENST00000641177 1386 ntBASIC8.23□□□□□ -1.09
PTPRMP28827 MIPOL1-201ENST00000327441 7185 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
PTPRMP28827 PAX6-270ENST00000640368 6975 ntAPPRIS P4 TSL 5 BASIC8.23□□□□□ -1.09
PTPRMP28827 KIAA0391-201ENST00000250377 6118 ntTSL 2 BASIC8.23□□□□□ -1.09
PTPRMP28827 KALRN-202ENST00000291478 10888 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
PTPRMP28827 KIF1B-202ENST00000377081 8746 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
PTPRMP28827 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
PTPRMP28827 NPM1-202ENST00000351986 1237 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
PTPRMP28827 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC8.23□□□□□ -1.09
PTPRMP28827 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC8.23□□□□□ -1.09
PTPRMP28827 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC8.23□□□□□ -1.09
PTPRMP28827 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC8.23□□□□□ -1.09
PTPRMP28827 AC074255.1-201ENST00000511259 501 ntBASIC8.23□□□□□ -1.09
PTPRMP28827 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC8.23□□□□□ -1.09
PTPRMP28827 NAT1-206ENST00000518029 2162 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
PTPRMP28827 HMGB1P40-201ENST00000525121 540 ntBASIC8.23□□□□□ -1.09
PTPRMP28827 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC8.23□□□□□ -1.09
PTPRMP28827 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC8.23□□□□□ -1.09
PTPRMP28827 MIR4737-201ENST00000583979 81 ntBASIC8.23□□□□□ -1.09
PTPRMP28827 MIR6780A-201ENST00000615089 68 ntBASIC8.23□□□□□ -1.09
PTPRMP28827 AC025574.2-201ENST00000615621 514 ntBASIC8.23□□□□□ -1.09
PTPRMP28827 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC8.23□□□□□ -1.09
PTPRMP28827 AC099654.6-201ENST00000636487 512 ntBASIC8.23□□□□□ -1.09
PTPRMP28827 FTO-223ENST00000640179 210 ntTSL 5 BASIC8.23□□□□□ -1.09
PTPRMP28827 GON4L-217ENST00000615926 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC8.23□□□□□ -1.09
PTPRMP28827 AL353763.1-201ENST00000624467 1628 ntBASIC8.23□□□□□ -1.09
PTPRMP28827 SIPA1L1-201ENST00000358550 6539 ntAPPRIS ALT1 TSL 2 BASIC8.23□□□□□ -1.09
PTPRMP28827 ASNS-209ENST00000444334 1812 ntTSL 2 BASIC8.23□□□□□ -1.09
PTPRMP28827 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
PTPRMP28827 ZC3H6-202ENST00000409871 11542 ntAPPRIS P1 TSL 2 BASIC8.22□□□□□ -1.09
PTPRMP28827 ATF6-201ENST00000367942 7496 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Retrieved 100 of 98,524 protein–RNA pairs in 95 ms