Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 RNA5SP232-201ENST00000364144 119 ntBASIC7.85□□□□□ -1.15
ERCC3P19447 ECHDC1-202ENST00000368289 909 ntTSL 5 BASIC7.85□□□□□ -1.15
ERCC3P19447 S100A7L2-201ENST00000368725 339 ntAPPRIS P1 TSL 5 BASIC7.85□□□□□ -1.15
ERCC3P19447 YAF2-202ENST00000380790 1211 ntTSL 2 BASIC7.85□□□□□ -1.15
ERCC3P19447 VIM2P-201ENST00000402383 1294 ntBASIC7.85□□□□□ -1.15
ERCC3P19447 LINC00396-201ENST00000411690 439 ntTSL 3 BASIC7.85□□□□□ -1.15
ERCC3P19447 SDCBP-203ENST00000424270 1277 ntAPPRIS ALT1 TSL 2 BASIC7.85□□□□□ -1.15
ERCC3P19447 RAC1P8-201ENST00000427086 527 ntBASIC7.85□□□□□ -1.15
ERCC3P19447 OSTN-AS1-201ENST00000430375 515 ntTSL 5 BASIC7.85□□□□□ -1.15
ERCC3P19447 MOB1AP1-201ENST00000430903 535 ntBASIC7.85□□□□□ -1.15
ERCC3P19447 AC092162.2-201ENST00000438143 532 ntTSL 4 BASIC7.85□□□□□ -1.15
ERCC3P19447 AC016908.1-201ENST00000442571 1219 ntBASIC7.85□□□□□ -1.15
ERCC3P19447 DEFA11P-201ENST00000446470 261 ntBASIC7.85□□□□□ -1.15
ERCC3P19447 AP002856.1-201ENST00000447864 562 ntTSL 4 BASIC7.85□□□□□ -1.15
ERCC3P19447 MEF2AP1-201ENST00000454867 863 ntBASIC7.85□□□□□ -1.15
ERCC3P19447 AC083806.1-201ENST00000468934 316 ntBASIC7.85□□□□□ -1.15
ERCC3P19447 AC026254.2-201ENST00000475295 371 ntBASIC7.85□□□□□ -1.15
ERCC3P19447 EFCAB10-203ENST00000480514 740 ntAPPRIS ALT1 TSL 1 (best) BASIC7.85□□□□□ -1.15
ERCC3P19447 BET1P1-201ENST00000482276 359 ntBASIC7.85□□□□□ -1.15
ERCC3P19447 CPHL1P-204ENST00000482639 584 ntTSL 5 BASIC7.85□□□□□ -1.15
ERCC3P19447 RN7SL170P-201ENST00000487098 295 ntBASIC7.85□□□□□ -1.15
ERCC3P19447 AC093801.1-201ENST00000504017 307 ntTSL 2 BASIC7.85□□□□□ -1.15
ERCC3P19447 SUMO2P7-201ENST00000511179 285 ntBASIC7.85□□□□□ -1.15
ERCC3P19447 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC7.85□□□□□ -1.15
ERCC3P19447 AP000873.2-207ENST00000529607 452 ntTSL 3 BASIC7.85□□□□□ -1.15
ERCC3P19447 AF235103.1-201ENST00000530223 439 ntTSL 3 BASIC7.85□□□□□ -1.15
ERCC3P19447 MTCO2P15-201ENST00000532655 656 ntBASIC7.85□□□□□ -1.15
ERCC3P19447 HPS5-207ENST00000537258 1275 ntTSL 5 BASIC7.85□□□□□ -1.15
ERCC3P19447 AC025419.1-207ENST00000546198 1072 ntTSL 3 BASIC7.85□□□□□ -1.15
ERCC3P19447 AL390718.1-201ENST00000566904 506 ntTSL 3 BASIC7.85□□□□□ -1.15
ERCC3P19447 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC7.85□□□□□ -1.15
ERCC3P19447 AC095057.3-201ENST00000567102 1157 ntBASIC7.85□□□□□ -1.15
ERCC3P19447 MDFIC2-201ENST00000567252 778 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
ERCC3P19447 MIR4433B-201ENST00000581329 102 ntBASIC7.85□□□□□ -1.15
ERCC3P19447 AC015688.2-201ENST00000584523 262 ntBASIC7.85□□□□□ -1.15
ERCC3P19447 AC005546.1-201ENST00000591837 391 ntTSL 3 BASIC7.85□□□□□ -1.15
ERCC3P19447 AC010503.3-201ENST00000594355 540 ntBASIC7.85□□□□□ -1.15
ERCC3P19447 AL133507.1-201ENST00000605269 557 ntBASIC7.85□□□□□ -1.15
ERCC3P19447 AC004908.1-201ENST00000606572 541 ntBASIC7.85□□□□□ -1.15
ERCC3P19447 AC239809.3-203ENST00000611286 1050 ntTSL 5 BASIC7.85□□□□□ -1.15
ERCC3P19447 AL138478.1-201ENST00000612252 832 ntBASIC7.85□□□□□ -1.15
ERCC3P19447 Six3os1_1.1-201ENST00000620900 87 ntBASIC7.85□□□□□ -1.15
ERCC3P19447 EDRF1-AS1-214ENST00000622798 526 ntTSL 5 BASIC7.85□□□□□ -1.15
ERCC3P19447 AC007342.8-201ENST00000623278 678 ntBASIC7.85□□□□□ -1.15
ERCC3P19447 AC099329.1-203ENST00000629885 767 ntTSL 5 BASIC7.85□□□□□ -1.15
ERCC3P19447 AC183089.2-201ENST00000637931 916 ntBASIC7.85□□□□□ -1.15
ERCC3P19447 GABRA1-211ENST00000635880 1739 ntAPPRIS P1 TSL 5 BASIC7.85□□□□□ -1.15
ERCC3P19447 WBP11P1-201ENST00000562560 1931 ntBASIC7.85□□□□□ -1.15
ERCC3P19447 HIPK2-202ENST00000406875 15049 ntAPPRIS P4 TSL 1 (best) BASIC7.85□□□□□ -1.15
ERCC3P19447 C5orf24-201ENST00000338051 4270 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
ERCC3P19447 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC7.85□□□□□ -1.15
ERCC3P19447 NEMP2-202ENST00000409150 6168 ntAPPRIS P1 TSL 2 BASIC7.85□□□□□ -1.15
ERCC3P19447 CDY7P-201ENST00000429883 1604 ntBASIC7.85□□□□□ -1.15
ERCC3P19447 ALS2CR12-207ENST00000439709 1626 ntAPPRIS ALT2 TSL 2 BASIC7.85□□□□□ -1.15
ERCC3P19447 SLC10A7-204ENST00000502607 1638 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
ERCC3P19447 AC015871.3-201ENST00000618835 2261 ntBASIC7.85□□□□□ -1.15
ERCC3P19447 PSMB2-202ENST00000621781 4217 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
ERCC3P19447 RNF213-220ENST00000582970 21055 ntAPPRIS P2 TSL 1 (best) BASIC7.84□□□□□ -1.15
ERCC3P19447 UBR4-204ENST00000375254 15906 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
ERCC3P19447 DLC1-215ENST00000520226 3556 ntTSL 2 BASIC7.84□□□□□ -1.15
ERCC3P19447 DDX18-201ENST00000263239 3796 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
ERCC3P19447 PDE1C-203ENST00000396184 8852 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
ERCC3P19447 AL512310.3-201ENST00000547023 1335 ntBASIC7.84□□□□□ -1.15
ERCC3P19447 CLEC12A-201ENST00000304361 1549 ntAPPRIS P4 TSL 1 (best) BASIC7.84□□□□□ -1.15
ERCC3P19447 AL133243.4-201ENST00000623116 3109 ntBASIC7.84□□□□□ -1.15
ERCC3P19447 BLOC1S2-206ENST00000618916 2470 ntTSL 5 BASIC7.84□□□□□ -1.15
ERCC3P19447 AC114401.1-201ENST00000484222 2084 ntTSL 2 BASIC7.84□□□□□ -1.15
ERCC3P19447 AC019117.1-201ENST00000636929 1462 ntTSL 5 BASIC7.84□□□□□ -1.15
ERCC3P19447 CRYBA1-201ENST00000225387 783 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
ERCC3P19447 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
ERCC3P19447 RNU1-65P-201ENST00000363919 148 ntBASIC7.84□□□□□ -1.15
ERCC3P19447 RN7SKP47-201ENST00000365347 328 ntBASIC7.84□□□□□ -1.15
ERCC3P19447 ADPRM-201ENST00000379774 1209 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
ERCC3P19447 SFR1P1-201ENST00000403720 688 ntBASIC7.84□□□□□ -1.15
ERCC3P19447 MIR1275-201ENST00000408770 80 ntBASIC7.84□□□□□ -1.15
ERCC3P19447 AL356320.2-201ENST00000417263 507 ntBASIC7.84□□□□□ -1.15
ERCC3P19447 OR5W1P-201ENST00000423705 938 ntBASIC7.84□□□□□ -1.15
ERCC3P19447 PLA2G12AP2-201ENST00000424744 264 ntBASIC7.84□□□□□ -1.15
ERCC3P19447 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC7.84□□□□□ -1.15
ERCC3P19447 AC068888.2-201ENST00000435621 536 ntTSL 3 BASIC7.84□□□□□ -1.15
ERCC3P19447 CACYBPP1-201ENST00000438592 684 ntBASIC7.84□□□□□ -1.15
ERCC3P19447 ARMC4P1-201ENST00000438905 707 ntBASIC7.84□□□□□ -1.15
ERCC3P19447 FABP5P2-201ENST00000439042 408 ntBASIC7.84□□□□□ -1.15
ERCC3P19447 AC007383.1-201ENST00000445875 636 ntBASIC7.84□□□□□ -1.15
ERCC3P19447 LIX1L-AS1-206ENST00000447686 846 ntTSL 2 BASIC7.84□□□□□ -1.15
ERCC3P19447 AL050341.1-201ENST00000447743 313 ntBASIC7.84□□□□□ -1.15
ERCC3P19447 AL137005.1-201ENST00000452944 719 ntTSL 5 BASIC7.84□□□□□ -1.15
ERCC3P19447 FOXP1-AS1-201ENST00000465742 700 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
ERCC3P19447 AC073610.1-201ENST00000489971 396 ntBASIC7.84□□□□□ -1.15
ERCC3P19447 DUBR-205ENST00000495228 411 ntTSL 2 BASIC7.84□□□□□ -1.15
ERCC3P19447 AC023818.1-201ENST00000498379 384 ntBASIC7.84□□□□□ -1.15
ERCC3P19447 AC084871.1-201ENST00000508020 628 ntTSL 3 BASIC7.84□□□□□ -1.15
ERCC3P19447 B4GALNT2P1-201ENST00000508857 307 ntBASIC7.84□□□□□ -1.15
ERCC3P19447 ZFPM2-AS1-201ENST00000509144 542 ntTSL 3 BASIC7.84□□□□□ -1.15
ERCC3P19447 AC092593.2-201ENST00000513866 913 ntBASIC7.84□□□□□ -1.15
ERCC3P19447 RN7SKP248-201ENST00000516278 305 ntBASIC7.84□□□□□ -1.15
ERCC3P19447 RNU6-1004P-201ENST00000516584 111 ntBASIC7.84□□□□□ -1.15
ERCC3P19447 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC7.84□□□□□ -1.15
ERCC3P19447 AP001831.1-201ENST00000524610 411 ntTSL 3 BASIC7.84□□□□□ -1.15
ERCC3P19447 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
Retrieved 100 of 98,524 protein–RNA pairs in 68.2 ms