Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
COL11A1P12107 ABCA11P-202ENST00000504019 2110 ntBASIC6.35□□□□□ -1.39
COL11A1P12107 NBPF9-206ENST00000613969 4624 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
COL11A1P12107 RAB6C-AS1-201ENST00000412425 2454 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
COL11A1P12107 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
COL11A1P12107 PLEKHA1-201ENST00000368988 3872 ntTSL 5 BASIC6.34□□□□□ -1.39
COL11A1P12107 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC6.34□□□□□ -1.39
COL11A1P12107 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC6.34□□□□□ -1.39
COL11A1P12107 RNU1-149P-201ENST00000390870 161 ntBASIC6.34□□□□□ -1.39
COL11A1P12107 AL645927.1-201ENST00000396783 406 ntBASIC6.34□□□□□ -1.39
COL11A1P12107 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC6.34□□□□□ -1.39
COL11A1P12107 RBMY2QP-201ENST00000429799 1147 ntBASIC6.34□□□□□ -1.39
COL11A1P12107 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
COL11A1P12107 EEF1B2P5-201ENST00000444820 548 ntBASIC6.34□□□□□ -1.39
COL11A1P12107 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC6.34□□□□□ -1.39
COL11A1P12107 RPL7AP6-201ENST00000477943 801 ntBASIC6.34□□□□□ -1.39
COL11A1P12107 AC127381.1-201ENST00000555979 939 ntBASIC6.34□□□□□ -1.39
COL11A1P12107 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC6.34□□□□□ -1.39
COL11A1P12107 MIR3691-201ENST00000578066 90 ntBASIC6.34□□□□□ -1.39
COL11A1P12107 RN7SL708P-201ENST00000580952 299 ntBASIC6.34□□□□□ -1.39
COL11A1P12107 CLCC1-204ENST00000369968 4151 ntTSL 5 BASIC6.34□□□□□ -1.39
COL11A1P12107 LINC01776-201ENST00000418344 2229 ntTSL 2 BASIC6.34□□□□□ -1.39
COL11A1P12107 ARHGAP28-201ENST00000262227 5369 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.39
COL11A1P12107 MT-RNR2-201ENST00000387347 1559 ntBASIC6.34□□□□□ -1.39
COL11A1P12107 RFX4-203ENST00000392842 3955 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
COL11A1P12107 FGFR1OP-202ENST00000366847 14166 ntAPPRIS P4 TSL 1 (best) BASIC6.34□□□□□ -1.39
COL11A1P12107 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
COL11A1P12107 AL353796.1-201ENST00000561542 3241 ntBASIC6.34□□□□□ -1.39
COL11A1P12107 AC073429.2-201ENST00000569694 1444 ntBASIC6.34□□□□□ -1.39
COL11A1P12107 CASC19-243ENST00000641588 1546 ntBASIC6.34□□□□□ -1.39
COL11A1P12107 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC6.34□□□□□ -1.4
COL11A1P12107 AL109941.1-201ENST00000401925 229 ntBASIC6.34□□□□□ -1.4
COL11A1P12107 AL445190.1-201ENST00000416448 288 ntTSL 5 BASIC6.34□□□□□ -1.4
COL11A1P12107 LINC01291-202ENST00000418204 441 ntTSL 5 BASIC6.34□□□□□ -1.4
COL11A1P12107 TMEM183AP1-205ENST00000432739 290 ntBASIC6.34□□□□□ -1.4
COL11A1P12107 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC6.34□□□□□ -1.4
COL11A1P12107 AL672138.1-201ENST00000450604 1015 ntBASIC6.34□□□□□ -1.4
COL11A1P12107 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC6.34□□□□□ -1.4
COL11A1P12107 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC6.34□□□□□ -1.4
COL11A1P12107 AL035078.1-201ENST00000531962 820 ntTSL 5 BASIC6.34□□□□□ -1.4
COL11A1P12107 ASB8-202ENST00000535055 657 ntTSL 2 BASIC6.34□□□□□ -1.4
COL11A1P12107 AC006504.7-201ENST00000592806 924 ntTSL 3 BASIC6.34□□□□□ -1.4
COL11A1P12107 AP000769.2-201ENST00000602344 396 ntBASIC6.34□□□□□ -1.4
COL11A1P12107 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC6.34□□□□□ -1.4
COL11A1P12107 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC6.34□□□□□ -1.4
COL11A1P12107 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC6.34□□□□□ -1.4
COL11A1P12107 MDM4-215ENST00000614459 9782 ntTSL 5 BASIC6.34□□□□□ -1.4
COL11A1P12107 DCP2-201ENST00000389063 8947 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
COL11A1P12107 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
COL11A1P12107 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
COL11A1P12107 AC140479.2-201ENST00000421567 3130 ntBASIC6.33□□□□□ -1.4
COL11A1P12107 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC6.33□□□□□ -1.4
COL11A1P12107 ZNF969P-201ENST00000510345 2341 ntBASIC6.33□□□□□ -1.4
COL11A1P12107 KNL1-201ENST00000346991 9573 ntAPPRIS P4 TSL 1 (best) BASIC6.33□□□□□ -1.4
COL11A1P12107 ENTPD1-205ENST00000453258 5044 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
COL11A1P12107 ZFX-202ENST00000338565 2906 ntTSL 5 BASIC6.33□□□□□ -1.4
COL11A1P12107 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC6.33□□□□□ -1.4
COL11A1P12107 ST6GAL1-211ENST00000448044 4302 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
COL11A1P12107 ITGA2-201ENST00000296585 7869 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
COL11A1P12107 FAM205BP-203ENST00000455647 3752 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
COL11A1P12107 RN7SKP125-201ENST00000410481 302 ntBASIC6.33□□□□□ -1.4
COL11A1P12107 LINC01687-201ENST00000416327 795 ntTSL 3 BASIC6.33□□□□□ -1.4
COL11A1P12107 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC6.33□□□□□ -1.4
COL11A1P12107 AL389915.2-201ENST00000454576 441 ntBASIC6.33□□□□□ -1.4
COL11A1P12107 LINC00518-204ENST00000491317 1228 ntTSL 2 BASIC6.33□□□□□ -1.4
COL11A1P12107 AC078899.1-201ENST00000521432 1185 ntBASIC6.33□□□□□ -1.4
COL11A1P12107 AL121594.2-201ENST00000541658 472 ntBASIC6.33□□□□□ -1.4
COL11A1P12107 AGGF1P7-201ENST00000562369 913 ntBASIC6.33□□□□□ -1.4
COL11A1P12107 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC6.33□□□□□ -1.4
COL11A1P12107 AC090510.2-201ENST00000617465 629 ntBASIC6.33□□□□□ -1.4
COL11A1P12107 AL445528.2-201ENST00000620582 470 ntBASIC6.33□□□□□ -1.4
COL11A1P12107 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC6.33□□□□□ -1.4
COL11A1P12107 SAMMSON-227ENST00000642114 1199 ntBASIC6.33□□□□□ -1.4
COL11A1P12107 MIR4500HG-201ENST00000436290 1675 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
COL11A1P12107 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC6.33□□□□□ -1.4
COL11A1P12107 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
COL11A1P12107 HTR2A-202ENST00000542664 5429 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
COL11A1P12107 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
COL11A1P12107 AGBL1-201ENST00000441037 3551 ntAPPRIS ALT2 TSL 5 BASIC6.32□□□□□ -1.4
COL11A1P12107 SF3B1-201ENST00000335508 6526 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
COL11A1P12107 DDX1-208ENST00000621973 2183 ntTSL 5 BASIC6.32□□□□□ -1.4
COL11A1P12107 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
COL11A1P12107 AL133388.1-201ENST00000404509 287 ntBASIC6.32□□□□□ -1.4
COL11A1P12107 AP000534.2-201ENST00000412729 568 ntBASIC6.32□□□□□ -1.4
COL11A1P12107 AL157834.1-201ENST00000422744 420 ntTSL 3 BASIC6.32□□□□□ -1.4
COL11A1P12107 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
COL11A1P12107 USP24P1-201ENST00000433802 779 ntBASIC6.32□□□□□ -1.4
COL11A1P12107 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC6.32□□□□□ -1.4
COL11A1P12107 RSU1P1-201ENST00000453416 441 ntBASIC6.32□□□□□ -1.4
COL11A1P12107 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC6.32□□□□□ -1.4
COL11A1P12107 LINC02339-201ENST00000472649 752 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
COL11A1P12107 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC6.32□□□□□ -1.4
COL11A1P12107 KCTD21-AS1-206ENST00000532831 856 ntTSL 2 BASIC6.32□□□□□ -1.4
COL11A1P12107 AC023906.4-201ENST00000557898 895 ntTSL 3 BASIC6.32□□□□□ -1.4
COL11A1P12107 AC007346.2-201ENST00000564816 892 ntBASIC6.32□□□□□ -1.4
COL11A1P12107 AC109460.2-201ENST00000569974 544 ntTSL 3 BASIC6.32□□□□□ -1.4
COL11A1P12107 AGO1-201ENST00000373204 13708 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
COL11A1P12107 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
COL11A1P12107 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC6.32□□□□□ -1.4
COL11A1P12107 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC6.32□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 102.1 ms