Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 P2RY14-202ENST00000424796 1780 ntAPPRIS P1 TSL 2 BASIC4.36□□□□□ -1.71
CXCL1P09341 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
CXCL1P09341 OR4Q3-201ENST00000331723 942 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
CXCL1P09341 Y_RNA.209-201ENST00000364156 111 ntBASIC4.36□□□□□ -1.71
CXCL1P09341 ZCCHC6-202ENST00000375947 611 ntTSL 5 BASIC4.36□□□□□ -1.71
CXCL1P09341 ATP5EP2-201ENST00000381026 385 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
CXCL1P09341 SNORA7A-201ENST00000384765 139 ntBASIC4.36□□□□□ -1.71
CXCL1P09341 AL078599.1-201ENST00000402075 293 ntBASIC4.36□□□□□ -1.71
CXCL1P09341 RPL10P10-201ENST00000403509 664 ntBASIC4.36□□□□□ -1.71
CXCL1P09341 SSR1P1-201ENST00000407630 814 ntBASIC4.36□□□□□ -1.71
CXCL1P09341 RNA5SP155-201ENST00000411154 129 ntBASIC4.36□□□□□ -1.71
CXCL1P09341 RPL12P9-201ENST00000412942 488 ntBASIC4.36□□□□□ -1.71
CXCL1P09341 AC018878.1-201ENST00000419904 433 ntTSL 3 BASIC4.36□□□□□ -1.71
CXCL1P09341 AC012519.1-201ENST00000424588 610 ntBASIC4.36□□□□□ -1.71
CXCL1P09341 MTND6P12-201ENST00000428247 522 ntBASIC4.36□□□□□ -1.71
CXCL1P09341 AL354896.1-201ENST00000430214 561 ntTSL 4 BASIC4.36□□□□□ -1.71
CXCL1P09341 AC094019.1-201ENST00000434678 472 ntBASIC4.36□□□□□ -1.71
CXCL1P09341 NPM1P33-201ENST00000438918 872 ntBASIC4.36□□□□□ -1.71
CXCL1P09341 AL445623.1-201ENST00000440888 237 ntTSL 3 BASIC4.36□□□□□ -1.71
CXCL1P09341 AC073465.2-201ENST00000440938 498 ntBASIC4.36□□□□□ -1.71
CXCL1P09341 TRIM60P16-201ENST00000444048 694 ntBASIC4.36□□□□□ -1.71
CXCL1P09341 LINC00189-203ENST00000447125 783 ntTSL 3 BASIC4.36□□□□□ -1.71
CXCL1P09341 AL354872.1-201ENST00000456361 967 ntBASIC4.36□□□□□ -1.71
CXCL1P09341 RPS7P11-201ENST00000484240 586 ntBASIC4.36□□□□□ -1.71
CXCL1P09341 AC093766.1-201ENST00000502606 866 ntTSL 3 BASIC4.36□□□□□ -1.71
CXCL1P09341 AC105391.1-201ENST00000503155 1045 ntBASIC4.36□□□□□ -1.71
CXCL1P09341 AC114324.2-202ENST00000503812 134 ntBASIC4.36□□□□□ -1.71
CXCL1P09341 MGC32805-204ENST00000509993 783 ntTSL 2 BASIC4.36□□□□□ -1.71
CXCL1P09341 RNA5SP464-201ENST00000516251 108 ntBASIC4.36□□□□□ -1.71
CXCL1P09341 FBXO16-207ENST00000518734 995 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
CXCL1P09341 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC4.36□□□□□ -1.71
CXCL1P09341 AC090150.1-201ENST00000521408 585 ntTSL 4 BASIC4.36□□□□□ -1.71
CXCL1P09341 AC100784.1-201ENST00000522790 310 ntBASIC4.36□□□□□ -1.71
CXCL1P09341 AC007991.4-201ENST00000522970 605 ntTSL 3 BASIC4.36□□□□□ -1.71
CXCL1P09341 KCTD21-AS1-203ENST00000527321 586 ntTSL 3 BASIC4.36□□□□□ -1.71
CXCL1P09341 AC013549.3-201ENST00000528792 419 ntTSL 3 BASIC4.36□□□□□ -1.71
CXCL1P09341 ST3GAL3-232ENST00000531451 420 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
CXCL1P09341 AP002004.1-206ENST00000532441 876 ntBASIC4.36□□□□□ -1.71
CXCL1P09341 PSMC1P8-201ENST00000536820 1296 ntBASIC4.36□□□□□ -1.71
CXCL1P09341 LRTOMT-217ENST00000539587 428 ntTSL 2 BASIC4.36□□□□□ -1.71
CXCL1P09341 LINC02420-201ENST00000543387 741 ntTSL 5 BASIC4.36□□□□□ -1.71
CXCL1P09341 AC037479.1-201ENST00000558361 625 ntBASIC4.36□□□□□ -1.71
CXCL1P09341 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC4.36□□□□□ -1.71
CXCL1P09341 MIR9-3HG-211ENST00000561037 779 ntTSL 5 BASIC4.36□□□□□ -1.71
CXCL1P09341 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC4.36□□□□□ -1.71
CXCL1P09341 AC025283.1-201ENST00000572039 734 ntBASIC4.36□□□□□ -1.71
CXCL1P09341 AC100832.2-201ENST00000582080 776 ntBASIC4.36□□□□□ -1.71
CXCL1P09341 MIR8082-201ENST00000612488 81 ntBASIC4.36□□□□□ -1.71
CXCL1P09341 Metazoa_SRP.195-201ENST00000612667 287 ntBASIC4.36□□□□□ -1.71
CXCL1P09341 AC022106.1-201ENST00000612834 766 ntBASIC4.36□□□□□ -1.71
CXCL1P09341 MIR6732-201ENST00000619365 60 ntBASIC4.36□□□□□ -1.71
CXCL1P09341 PSMD10P2-203ENST00000627340 914 ntTSL 5 BASIC4.36□□□□□ -1.71
CXCL1P09341 COPS7B-225ENST00000631349 189 ntTSL 5 BASIC4.36□□□□□ -1.71
CXCL1P09341 TTC33-206ENST00000636863 1149 ntTSL 5 BASIC4.36□□□□□ -1.71
CXCL1P09341 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC4.36□□□□□ -1.71
CXCL1P09341 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
CXCL1P09341 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC4.36□□□□□ -1.71
CXCL1P09341 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
CXCL1P09341 LINC02010-202ENST00000471638 1829 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
CXCL1P09341 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC4.36□□□□□ -1.71
CXCL1P09341 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC4.36□□□□□ -1.71
CXCL1P09341 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC4.36□□□□□ -1.71
CXCL1P09341 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC4.36□□□□□ -1.71
CXCL1P09341 CHN1-201ENST00000295497 2047 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
CXCL1P09341 CD96-202ENST00000352690 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
CXCL1P09341 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC4.36□□□□□ -1.71
CXCL1P09341 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
CXCL1P09341 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
CXCL1P09341 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
CXCL1P09341 ZCWPW2-201ENST00000383768 1716 ntAPPRIS P2 TSL 1 (best) BASIC4.35□□□□□ -1.71
CXCL1P09341 UBE3A-205ENST00000566215 3176 ntAPPRIS P3 TSL 1 (best) BASIC4.35□□□□□ -1.71
CXCL1P09341 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
CXCL1P09341 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CXCL1P09341 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC4.35□□□□□ -1.71
CXCL1P09341 PLN-201ENST00000357525 2001 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
CXCL1P09341 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
CXCL1P09341 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC4.35□□□□□ -1.71
CXCL1P09341 RNA5SP326-201ENST00000363209 110 ntBASIC4.35□□□□□ -1.71
CXCL1P09341 OR1L6-202ENST00000373684 1044 ntBASIC4.35□□□□□ -1.71
CXCL1P09341 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CXCL1P09341 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC4.35□□□□□ -1.71
CXCL1P09341 TRAV8-4-201ENST00000390438 469 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
CXCL1P09341 AL139805.1-201ENST00000407837 289 ntBASIC4.35□□□□□ -1.71
CXCL1P09341 AL096829.1-201ENST00000413677 457 ntBASIC4.35□□□□□ -1.71
CXCL1P09341 RPL35AP31-201ENST00000418340 337 ntBASIC4.35□□□□□ -1.71
CXCL1P09341 LINC00310-202ENST00000419881 910 ntTSL 5 BASIC4.35□□□□□ -1.71
CXCL1P09341 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC4.35□□□□□ -1.71
CXCL1P09341 OSTCP4-201ENST00000424397 449 ntBASIC4.35□□□□□ -1.71
CXCL1P09341 SLC25A24P1-202ENST00000434803 1220 ntBASIC4.35□□□□□ -1.71
CXCL1P09341 PCBP2P1-201ENST00000437262 977 ntBASIC4.35□□□□□ -1.71
CXCL1P09341 CXCR2P1-202ENST00000443392 1074 ntBASIC4.35□□□□□ -1.71
CXCL1P09341 XXYLT1-AS2-202ENST00000447975 784 ntTSL 2 BASIC4.35□□□□□ -1.71
CXCL1P09341 RNU1-88P-201ENST00000459274 128 ntBASIC4.35□□□□□ -1.71
CXCL1P09341 PHC3-208ENST00000481639 1075 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CXCL1P09341 RPS7P6-201ENST00000485777 579 ntBASIC4.35□□□□□ -1.71
CXCL1P09341 OR11I1P-201ENST00000486033 954 ntBASIC4.35□□□□□ -1.71
CXCL1P09341 NREP-217ENST00000509025 987 ntTSL 3 BASIC4.35□□□□□ -1.71
CXCL1P09341 BTG4P1-201ENST00000510421 183 ntBASIC4.35□□□□□ -1.71
CXCL1P09341 AC093664.1-201ENST00000511779 289 ntBASIC4.35□□□□□ -1.71
CXCL1P09341 NREP-223ENST00000515855 801 ntTSL 4 BASIC4.35□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 67.7 ms