Protein–RNA interactions for Protein: P08F94

PKHD1, Fibrocystin, humanhuman

Predictions only

Length 4,074 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKHD1P08F94 AL050305.1-201ENST00000399993 1230 ntBASIC3.44□□□□□ -1.86
PKHD1P08F94 GJA6P-201ENST00000415117 1042 ntBASIC3.44□□□□□ -1.86
PKHD1P08F94 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC3.44□□□□□ -1.86
PKHD1P08F94 AL451062.2-201ENST00000427515 271 ntBASIC3.44□□□□□ -1.86
PKHD1P08F94 RSU1P1-201ENST00000453416 441 ntBASIC3.44□□□□□ -1.86
PKHD1P08F94 RPL7AP52-201ENST00000458096 790 ntBASIC3.44□□□□□ -1.86
PKHD1P08F94 AC093720.1-201ENST00000505681 714 ntBASIC3.44□□□□□ -1.86
PKHD1P08F94 KCTD9P4-201ENST00000526766 1166 ntBASIC3.44□□□□□ -1.86
PKHD1P08F94 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC3.44□□□□□ -1.86
PKHD1P08F94 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC3.44□□□□□ -1.86
PKHD1P08F94 AC004890.3-201ENST00000605566 1095 ntBASIC3.44□□□□□ -1.86
PKHD1P08F94 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC3.44□□□□□ -1.86
PKHD1P08F94 HTR4-206ENST00000520086 2272 ntTSL 2 BASIC3.44□□□□□ -1.86
PKHD1P08F94 RBM33-207ENST00000401878 10149 ntAPPRIS P2 TSL 5 BASIC3.43□□□□□ -1.86
PKHD1P08F94 TMEM33-203ENST00000504986 7482 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
PKHD1P08F94 SELE-201ENST00000333360 3857 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
PKHD1P08F94 OSBPL9-203ENST00000428468 2893 ntAPPRIS P3 TSL 1 (best) BASIC3.43□□□□□ -1.86
PKHD1P08F94 GREB1L-201ENST00000269218 5600 ntTSL 5 BASIC3.43□□□□□ -1.86
PKHD1P08F94 TNFRSF9-204ENST00000615230 5970 ntAPPRIS P1 TSL 5 BASIC3.43□□□□□ -1.86
PKHD1P08F94 LYRM4-201ENST00000330636 7312 ntAPPRIS P3 TSL 1 (best) BASIC3.43□□□□□ -1.86
PKHD1P08F94 PABPC1P8-201ENST00000452851 2086 ntBASIC3.43□□□□□ -1.86
PKHD1P08F94 OAS2-201ENST00000342315 3613 ntAPPRIS P3 TSL 1 (best) BASIC3.43□□□□□ -1.86
PKHD1P08F94 ADH7-202ENST00000437033 2516 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
PKHD1P08F94 SMIM21-203ENST00000584508 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC3.43□□□□□ -1.86
PKHD1P08F94 PROX1-203ENST00000435016 3075 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
PKHD1P08F94 RPL32P23-201ENST00000397237 405 ntBASIC3.43□□□□□ -1.86
PKHD1P08F94 RNA5SP487-201ENST00000410186 122 ntBASIC3.43□□□□□ -1.86
PKHD1P08F94 C4BPAP2-201ENST00000428434 478 ntBASIC3.43□□□□□ -1.86
PKHD1P08F94 AC073062.1-201ENST00000434509 455 ntTSL 5 BASIC3.43□□□□□ -1.86
PKHD1P08F94 AL731534.1-201ENST00000434711 269 ntBASIC3.43□□□□□ -1.86
PKHD1P08F94 CDC27P1-201ENST00000445384 715 ntBASIC3.43□□□□□ -1.86
PKHD1P08F94 MORF4L1P3-201ENST00000525966 950 ntBASIC3.43□□□□□ -1.86
PKHD1P08F94 PARP1P2-201ENST00000556806 195 ntBASIC3.43□□□□□ -1.86
PKHD1P08F94 AC007494.1-201ENST00000562293 760 ntBASIC3.43□□□□□ -1.86
PKHD1P08F94 AC009948.3-201ENST00000603415 1798 ntBASIC3.43□□□□□ -1.86
PKHD1P08F94 CSMD1-202ENST00000400186 10938 ntAPPRIS ALT2 TSL 5 BASIC3.43□□□□□ -1.86
PKHD1P08F94 CSMD1-217ENST00000602723 10938 ntAPPRIS ALT2 TSL 5 BASIC3.43□□□□□ -1.86
PKHD1P08F94 MTHFD1-202ENST00000545908 6814 ntTSL 2 BASIC3.43□□□□□ -1.86
PKHD1P08F94 CACNA1C-202ENST00000335762 6968 ntAPPRIS ALT2 TSL 5 BASIC3.43□□□□□ -1.86
PKHD1P08F94 PRKG1-203ENST00000373980 6928 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
PKHD1P08F94 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC3.43□□□□□ -1.86
PKHD1P08F94 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC3.43□□□□□ -1.86
PKHD1P08F94 PKD1L2-203ENST00000525539 7379 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
PKHD1P08F94 LUC7L2-201ENST00000263545 2287 ntTSL 5 BASIC3.43□□□□□ -1.86
PKHD1P08F94 PSEN1-201ENST00000324501 6078 ntAPPRIS P4 TSL 1 (best) BASIC3.43□□□□□ -1.86
PKHD1P08F94 MYO1E-201ENST00000288235 8673 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
PKHD1P08F94 CMKLR1-202ENST00000412676 5110 ntAPPRIS ALT2 TSL 3 BASIC3.43□□□□□ -1.86
PKHD1P08F94 MT-RNR2-201ENST00000387347 1559 ntBASIC3.43□□□□□ -1.86
PKHD1P08F94 ZNF521-214ENST00000584787 4327 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
PKHD1P08F94 RNA5SP455-201ENST00000365190 119 ntBASIC3.43□□□□□ -1.86
PKHD1P08F94 AP003170.5-201ENST00000397185 335 ntBASIC3.43□□□□□ -1.86
PKHD1P08F94 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC3.43□□□□□ -1.86
PKHD1P08F94 BZW1P1-201ENST00000454901 1240 ntBASIC3.43□□□□□ -1.86
PKHD1P08F94 AC063943.1-201ENST00000465434 453 ntBASIC3.43□□□□□ -1.86
PKHD1P08F94 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC3.43□□□□□ -1.86
PKHD1P08F94 RN7SKP99-201ENST00000517028 307 ntBASIC3.43□□□□□ -1.86
PKHD1P08F94 PDCD6IPP2-207ENST00000566321 1069 ntBASIC3.43□□□□□ -1.86
PKHD1P08F94 IL23R-201ENST00000347310 2912 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
PKHD1P08F94 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC3.43□□□□□ -1.86
PKHD1P08F94 RRN3-202ENST00000327307 2039 ntTSL 2 BASIC3.43□□□□□ -1.86
PKHD1P08F94 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
PKHD1P08F94 BRCA1-210ENST00000471181 5936 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
PKHD1P08F94 OR9K1P-202ENST00000641111 3217 ntBASIC3.43□□□□□ -1.86
PKHD1P08F94 AMD1-203ENST00000368882 3059 ntTSL 2 BASIC3.43□□□□□ -1.86
PKHD1P08F94 TNR-202ENST00000367674 12949 ntAPPRIS P1 TSL 5 BASIC3.43□□□□□ -1.86
PKHD1P08F94 BACH2-201ENST00000257749 9113 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
PKHD1P08F94 REL-201ENST00000295025 11255 ntAPPRIS P3 TSL 1 (best) BASIC3.43□□□□□ -1.86
PKHD1P08F94 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
PKHD1P08F94 RNA5SP326-201ENST00000363209 110 ntBASIC3.43□□□□□ -1.86
PKHD1P08F94 RNU4-2-201ENST00000365668 141 ntBASIC3.43□□□□□ -1.86
PKHD1P08F94 SLC9B1P4-201ENST00000421957 1288 ntBASIC3.43□□□□□ -1.86
PKHD1P08F94 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
PKHD1P08F94 AL596266.1-201ENST00000448132 400 ntBASIC3.43□□□□□ -1.86
PKHD1P08F94 RNA5SP392-201ENST00000516905 112 ntBASIC3.43□□□□□ -1.86
PKHD1P08F94 AL121594.2-201ENST00000541658 472 ntBASIC3.43□□□□□ -1.86
PKHD1P08F94 AC090109.1-201ENST00000548885 819 ntTSL 3 BASIC3.43□□□□□ -1.86
PKHD1P08F94 RN7SL356P-201ENST00000582228 248 ntBASIC3.43□□□□□ -1.86
PKHD1P08F94 AC067959.1-201ENST00000604334 379 ntBASIC3.43□□□□□ -1.86
PKHD1P08F94 LINC02335-201ENST00000616578 659 ntTSL 3 BASIC3.43□□□□□ -1.86
PKHD1P08F94 LRRIQ3-201ENST00000354431 2849 ntAPPRIS P2 TSL 5 BASIC3.43□□□□□ -1.86
PKHD1P08F94 USP8-204ENST00000425032 3559 ntTSL 2 BASIC3.43□□□□□ -1.86
PKHD1P08F94 CACNA2D3-210ENST00000490478 3557 ntAPPRIS ALT2 TSL 1 (best) BASIC3.43□□□□□ -1.86
PKHD1P08F94 MARCH7-201ENST00000259050 5922 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
PKHD1P08F94 RP1-201ENST00000220676 7100 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
PKHD1P08F94 CLEC7A-205ENST00000353231 2446 ntAPPRIS P3 TSL 1 (best) BASIC3.43□□□□□ -1.86
PKHD1P08F94 RBM12B-201ENST00000399300 7269 ntAPPRIS P2 TSL 2 BASIC3.43□□□□□ -1.86
PKHD1P08F94 AL132640.2-201ENST00000559968 1698 ntBASIC3.42□□□□□ -1.86
PKHD1P08F94 FCHSD2-201ENST00000311172 4340 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
PKHD1P08F94 LRRC37A-202ENST00000393465 4997 ntAPPRIS ALT2 TSL 5 BASIC3.42□□□□□ -1.86
PKHD1P08F94 LMO3-235ENST00000616247 3227 ntTSL 5 BASIC3.42□□□□□ -1.86
PKHD1P08F94 DHX40P1-201ENST00000588725 1412 ntBASIC3.42□□□□□ -1.86
PKHD1P08F94 SYTL4-203ENST00000372981 4847 ntTSL 2 BASIC3.42□□□□□ -1.86
PKHD1P08F94 PLEKHA5-213ENST00000538714 6487 ntAPPRIS ALT2 TSL 1 (best) BASIC3.42□□□□□ -1.86
PKHD1P08F94 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC3.42□□□□□ -1.86
PKHD1P08F94 ESRRG-201ENST00000359162 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
PKHD1P08F94 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC3.42□□□□□ -1.86
PKHD1P08F94 ZYG11B-201ENST00000294353 8093 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
PKHD1P08F94 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC3.42□□□□□ -1.86
PKHD1P08F94 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC3.42□□□□□ -1.86
PKHD1P08F94 ATP6V0E1P2-201ENST00000441771 245 ntBASIC3.42□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 69.7 ms