Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 AC137056.2-201ENST00000624055 1958 ntBASIC6.8□□□□□ -1.32
COL1A1P02452 NAV3-202ENST00000536525 7386 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
COL1A1P02452 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC6.8□□□□□ -1.32
COL1A1P02452 CTNNA2-202ENST00000361291 3071 ntTSL 5 BASIC6.8□□□□□ -1.32
COL1A1P02452 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC6.8□□□□□ -1.32
COL1A1P02452 AC011933.2-201ENST00000578539 2790 ntBASIC6.8□□□□□ -1.32
COL1A1P02452 AC007402.1-201ENST00000440698 3939 ntTSL 2 BASIC6.8□□□□□ -1.32
COL1A1P02452 AC011503.1-201ENST00000596326 1585 ntTSL 2 BASIC6.79□□□□□ -1.32
COL1A1P02452 GPR52-201ENST00000367685 1088 ntAPPRIS P1 BASIC6.79□□□□□ -1.32
COL1A1P02452 RNU6ATAC18P-201ENST00000408413 101 ntBASIC6.79□□□□□ -1.32
COL1A1P02452 AL008723.2-201ENST00000426354 562 ntTSL 4 BASIC6.79□□□□□ -1.32
COL1A1P02452 AL645937.3-201ENST00000453647 936 ntBASIC6.79□□□□□ -1.32
COL1A1P02452 AC090638.1-201ENST00000498296 909 ntBASIC6.79□□□□□ -1.32
COL1A1P02452 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC6.79□□□□□ -1.32
COL1A1P02452 AC022832.1-201ENST00000530718 645 ntBASIC6.79□□□□□ -1.32
COL1A1P02452 AC126177.5-201ENST00000549599 178 ntBASIC6.79□□□□□ -1.32
COL1A1P02452 Metazoa_SRP.207-201ENST00000612254 285 ntBASIC6.79□□□□□ -1.32
COL1A1P02452 AC090607.5-201ENST00000615692 224 ntBASIC6.79□□□□□ -1.32
COL1A1P02452 MIR325HG-202ENST00000626832 598 ntTSL 4 BASIC6.79□□□□□ -1.32
COL1A1P02452 MAPK10-350ENST00000641777 965 ntBASIC6.79□□□□□ -1.32
COL1A1P02452 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
COL1A1P02452 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
COL1A1P02452 MAPK10-366ENST00000641903 2812 ntAPPRIS ALT1 BASIC6.79□□□□□ -1.32
COL1A1P02452 HNRNPR-210ENST00000478691 7646 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
COL1A1P02452 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC6.79□□□□□ -1.32
COL1A1P02452 AC010168.2-201ENST00000562691 5428 ntBASIC6.79□□□□□ -1.32
COL1A1P02452 FGF1-216ENST00000621536 4062 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
COL1A1P02452 MTOR-202ENST00000376838 4017 ntTSL 2 BASIC6.79□□□□□ -1.32
COL1A1P02452 UGT2A2-202ENST00000604629 1676 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
COL1A1P02452 PCBP1-AS1-230ENST00000439670 2180 ntTSL 2 BASIC6.79□□□□□ -1.32
COL1A1P02452 PPP1R1C-201ENST00000280295 1636 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
COL1A1P02452 LNX2-201ENST00000316334 4627 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
COL1A1P02452 QRSL1-202ENST00000369046 4106 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
COL1A1P02452 ZCCHC6-206ENST00000375963 5379 ntAPPRIS P1 TSL 5 BASIC6.79□□□□□ -1.32
COL1A1P02452 RPL23AP82-206ENST00000480246 2987 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
COL1A1P02452 ZNF365-204ENST00000395251 2695 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
COL1A1P02452 CCDC169-202ENST00000239860 716 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
COL1A1P02452 RNU1-77P-201ENST00000390868 162 ntBASIC6.79□□□□□ -1.32
COL1A1P02452 RNA5SP339-201ENST00000390987 122 ntBASIC6.79□□□□□ -1.32
COL1A1P02452 RPS26P38-201ENST00000414476 348 ntBASIC6.79□□□□□ -1.32
COL1A1P02452 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC6.79□□□□□ -1.32
COL1A1P02452 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC6.79□□□□□ -1.32
COL1A1P02452 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC6.79□□□□□ -1.32
COL1A1P02452 AURKAPS1-201ENST00000451805 1212 ntBASIC6.79□□□□□ -1.32
COL1A1P02452 RN7SL51P-201ENST00000468230 285 ntBASIC6.79□□□□□ -1.32
COL1A1P02452 LINC02339-201ENST00000472649 752 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
COL1A1P02452 RPL7AP6-201ENST00000477943 801 ntBASIC6.79□□□□□ -1.32
COL1A1P02452 RPS4XP1-201ENST00000482189 787 ntBASIC6.79□□□□□ -1.32
COL1A1P02452 RPL15P21-201ENST00000495592 567 ntBASIC6.79□□□□□ -1.32
COL1A1P02452 CCDC169-211ENST00000503173 837 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
COL1A1P02452 CDH12P4-201ENST00000517835 295 ntBASIC6.79□□□□□ -1.32
COL1A1P02452 CDH12P3-201ENST00000517935 295 ntBASIC6.79□□□□□ -1.32
COL1A1P02452 CDH12P1-201ENST00000518435 295 ntBASIC6.79□□□□□ -1.32
COL1A1P02452 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC6.79□□□□□ -1.32
COL1A1P02452 AP000676.2-201ENST00000529711 301 ntBASIC6.79□□□□□ -1.32
COL1A1P02452 AC078814.2-201ENST00000552996 535 ntTSL 4 BASIC6.79□□□□□ -1.32
COL1A1P02452 AC087286.2-201ENST00000558980 660 ntTSL 3 BASIC6.79□□□□□ -1.32
COL1A1P02452 ZNF969P-201ENST00000510345 2341 ntBASIC6.78□□□□□ -1.32
COL1A1P02452 AC134980.1-209ENST00000639059 2317 ntTSL 2 BASIC6.78□□□□□ -1.32
COL1A1P02452 TYW3-201ENST00000370867 3430 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
COL1A1P02452 NEK11-201ENST00000356918 1874 ntAPPRIS ALT2 TSL 5 BASIC6.78□□□□□ -1.32
COL1A1P02452 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC6.78□□□□□ -1.32
COL1A1P02452 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
COL1A1P02452 PRNCR1-201ENST00000635449 12727 ntBASIC6.78□□□□□ -1.32
COL1A1P02452 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC6.78□□□□□ -1.32
COL1A1P02452 AC116366.3-205ENST00000640655 8032 ntAPPRIS ALT2 TSL 5 BASIC6.78□□□□□ -1.32
COL1A1P02452 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
COL1A1P02452 GRAMD2B-202ENST00000502348 1363 ntTSL 2 BASIC6.78□□□□□ -1.32
COL1A1P02452 NBPF11-204ENST00000614785 4343 ntAPPRIS ALT2 TSL 5 BASIC6.78□□□□□ -1.32
COL1A1P02452 PKIA-201ENST00000352966 1736 ntAPPRIS P1 TSL 2 BASIC6.78□□□□□ -1.32
COL1A1P02452 ZMYM2-210ENST00000610343 10200 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
COL1A1P02452 SMC1A-201ENST00000322213 9784 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
COL1A1P02452 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC6.78□□□□□ -1.32
COL1A1P02452 NBEA-207ENST00000537702 4089 ntTSL 2 BASIC6.78□□□□□ -1.32
COL1A1P02452 CDYL2-207ENST00000570137 8159 ntAPPRIS P2 TSL 1 (best) BASIC6.78□□□□□ -1.32
COL1A1P02452 AC005294.1-201ENST00000355509 281 ntBASIC6.78□□□□□ -1.32
COL1A1P02452 U8.4-201ENST00000363626 134 ntBASIC6.78□□□□□ -1.32
COL1A1P02452 RNA5SP335-201ENST00000363817 110 ntBASIC6.78□□□□□ -1.32
COL1A1P02452 RN7SKP279-201ENST00000411383 298 ntBASIC6.78□□□□□ -1.32
COL1A1P02452 RPSAP35-201ENST00000413753 818 ntBASIC6.78□□□□□ -1.32
COL1A1P02452 AC092651.1-201ENST00000426110 312 ntBASIC6.78□□□□□ -1.32
COL1A1P02452 CYCSP6-201ENST00000434498 302 ntBASIC6.78□□□□□ -1.32
COL1A1P02452 LDHAP2-201ENST00000437325 985 ntBASIC6.78□□□□□ -1.32
COL1A1P02452 RPL12P3-201ENST00000440080 396 ntBASIC6.78□□□□□ -1.32
COL1A1P02452 RSU1P1-201ENST00000453416 441 ntBASIC6.78□□□□□ -1.32
COL1A1P02452 AL035090.1-201ENST00000454835 332 ntBASIC6.78□□□□□ -1.32
COL1A1P02452 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC6.78□□□□□ -1.32
COL1A1P02452 RPS7P6-201ENST00000485777 579 ntBASIC6.78□□□□□ -1.32
COL1A1P02452 NDUFB5P1-201ENST00000508134 564 ntBASIC6.78□□□□□ -1.32
COL1A1P02452 AC147055.3-201ENST00000510547 851 ntBASIC6.78□□□□□ -1.32
COL1A1P02452 AC092593.2-201ENST00000513866 913 ntBASIC6.78□□□□□ -1.32
COL1A1P02452 AC008575.1-201ENST00000520401 694 ntAPPRIS P1 TSL 3 BASIC6.78□□□□□ -1.32
COL1A1P02452 EIF4A2P5-201ENST00000529914 499 ntBASIC6.78□□□□□ -1.32
COL1A1P02452 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC6.78□□□□□ -1.32
COL1A1P02452 AC078820.1-201ENST00000548702 742 ntTSL 3 BASIC6.78□□□□□ -1.32
COL1A1P02452 HID1-AS1-201ENST00000577295 815 ntTSL 2 BASIC6.78□□□□□ -1.32
COL1A1P02452 RBM22P1-201ENST00000578589 1214 ntBASIC6.78□□□□□ -1.32
COL1A1P02452 DHFRP1-201ENST00000579682 559 ntBASIC6.78□□□□□ -1.32
COL1A1P02452 RN7SL708P-201ENST00000580952 299 ntBASIC6.78□□□□□ -1.32
COL1A1P02452 AC135983.2-201ENST00000604301 628 ntTSL 5 BASIC6.78□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 184.6 ms