Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 ZNF484-201ENST00000332591 2836 ntTSL 2 BASIC5.99□□□□□ -1.45
SMAD6O43541 TYW3-201ENST00000370867 3430 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
SMAD6O43541 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC5.99□□□□□ -1.45
SMAD6O43541 AL731532.1-201ENST00000623972 4236 ntBASIC5.99□□□□□ -1.45
SMAD6O43541 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC5.99□□□□□ -1.45
SMAD6O43541 ACOD1-202ENST00000449753 2097 ntAPPRIS ALT2 TSL 3 BASIC5.99□□□□□ -1.45
SMAD6O43541 SLC1A2-202ENST00000395750 11538 ntAPPRIS ALT1 TSL 1 (best) BASIC5.99□□□□□ -1.45
SMAD6O43541 NEPNP-201ENST00000404786 1371 ntBASIC5.99□□□□□ -1.45
SMAD6O43541 PDZK1P1-202ENST00000425209 1350 ntBASIC5.99□□□□□ -1.45
SMAD6O43541 MAPKAPK5P1-201ENST00000431810 1376 ntBASIC5.99□□□□□ -1.45
SMAD6O43541 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
SMAD6O43541 TAS2R16-201ENST00000249284 997 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
SMAD6O43541 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
SMAD6O43541 PRSS37-201ENST00000350549 1189 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
SMAD6O43541 AC083799.1-201ENST00000366451 910 ntBASIC5.99□□□□□ -1.45
SMAD6O43541 RNASE11-202ENST00000398009 1034 ntAPPRIS P2 TSL 5 BASIC5.99□□□□□ -1.45
SMAD6O43541 RNU2-72P-201ENST00000411175 163 ntBASIC5.99□□□□□ -1.45
SMAD6O43541 AL355300.1-201ENST00000412439 187 ntTSL 3 BASIC5.99□□□□□ -1.45
SMAD6O43541 MRPL53P1-201ENST00000414323 319 ntBASIC5.99□□□□□ -1.45
SMAD6O43541 AC126120.1-201ENST00000431082 470 ntBASIC5.99□□□□□ -1.45
SMAD6O43541 NAP1L4P3-201ENST00000432820 1147 ntBASIC5.99□□□□□ -1.45
SMAD6O43541 AC023481.1-201ENST00000435368 938 ntTSL 3 BASIC5.99□□□□□ -1.45
SMAD6O43541 AL357507.1-201ENST00000435946 669 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
SMAD6O43541 RPL23AP19-201ENST00000436229 369 ntBASIC5.99□□□□□ -1.45
SMAD6O43541 AL353751.1-203ENST00000437032 603 ntTSL 3 BASIC5.99□□□□□ -1.45
SMAD6O43541 AC019117.1-202ENST00000439046 589 ntTSL 3 BASIC5.99□□□□□ -1.45
SMAD6O43541 AL137186.1-201ENST00000440436 480 ntTSL 3 BASIC5.99□□□□□ -1.45
SMAD6O43541 TPRKBP1-201ENST00000456243 481 ntBASIC5.99□□□□□ -1.45
SMAD6O43541 ST20-201ENST00000478497 1004 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
SMAD6O43541 AADACP1-204ENST00000483636 1285 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
SMAD6O43541 RPL37AP8-201ENST00000494116 276 ntBASIC5.99□□□□□ -1.45
SMAD6O43541 LINC00483-204ENST00000502517 940 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
SMAD6O43541 HAUS1P1-201ENST00000505275 832 ntBASIC5.99□□□□□ -1.45
SMAD6O43541 AF250324.1-203ENST00000508156 517 ntTSL 3 BASIC5.99□□□□□ -1.45
SMAD6O43541 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC5.99□□□□□ -1.45
SMAD6O43541 AC108727.2-201ENST00000512277 392 ntTSL 3 BASIC5.99□□□□□ -1.45
SMAD6O43541 RN7SKP288-201ENST00000516227 268 ntBASIC5.99□□□□□ -1.45
SMAD6O43541 LINC00861-202ENST00000517869 606 ntTSL 5 BASIC5.99□□□□□ -1.45
SMAD6O43541 IGKV1OR22-1-201ENST00000521497 360 ntBASIC5.99□□□□□ -1.45
SMAD6O43541 AC013644.1-201ENST00000523724 555 ntTSL 4 BASIC5.99□□□□□ -1.45
SMAD6O43541 OR4A6P-201ENST00000534364 970 ntBASIC5.99□□□□□ -1.45
SMAD6O43541 AC091078.2-201ENST00000557145 559 ntBASIC5.99□□□□□ -1.45
SMAD6O43541 LINC01895-201ENST00000558690 404 ntTSL 5 BASIC5.99□□□□□ -1.45
SMAD6O43541 AP000842.3-201ENST00000564354 808 ntTSL 3 BASIC5.99□□□□□ -1.45
SMAD6O43541 AC009097.1-201ENST00000567077 406 ntTSL 3 BASIC5.99□□□□□ -1.45
SMAD6O43541 MIR4760-201ENST00000585040 80 ntBASIC5.99□□□□□ -1.45
SMAD6O43541 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
SMAD6O43541 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
SMAD6O43541 AC098617.1-205ENST00000595918 1032 ntTSL 5 BASIC5.99□□□□□ -1.45
SMAD6O43541 COX6CP7-201ENST00000597056 208 ntBASIC5.99□□□□□ -1.45
SMAD6O43541 AC145423.1-201ENST00000605712 336 ntBASIC5.99□□□□□ -1.45
SMAD6O43541 AC026124.2-201ENST00000621847 656 ntBASIC5.99□□□□□ -1.45
SMAD6O43541 HPVC1-201ENST00000629899 1198 ntBASIC5.99□□□□□ -1.45
SMAD6O43541 AC020633.1-201ENST00000468439 2247 ntBASIC5.99□□□□□ -1.45
SMAD6O43541 HCG18-237ENST00000444126 4605 ntTSL 5 BASIC5.99□□□□□ -1.45
SMAD6O43541 Z95114.1-201ENST00000624264 14574 ntBASIC5.99□□□□□ -1.45
SMAD6O43541 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC5.99□□□□□ -1.45
SMAD6O43541 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC5.99□□□□□ -1.45
SMAD6O43541 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
SMAD6O43541 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
SMAD6O43541 TMEM133-201ENST00000303130 1953 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
SMAD6O43541 C17orf78-203ENST00000611038 1675 ntAPPRIS ALT2 TSL 2 BASIC5.98□□□□□ -1.45
SMAD6O43541 SBNO1-202ENST00000420886 10981 ntAPPRIS ALT1 TSL 1 (best) BASIC5.98□□□□□ -1.45
SMAD6O43541 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
SMAD6O43541 RNF19BPY-201ENST00000458209 1550 ntBASIC5.98□□□□□ -1.45
SMAD6O43541 LNX2-201ENST00000316334 4627 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
SMAD6O43541 DAAM1-202ENST00000395125 5806 ntAPPRIS P3 TSL 1 (best) BASIC5.98□□□□□ -1.45
SMAD6O43541 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
SMAD6O43541 ASAH2-203ENST00000443575 1942 ntTSL 5 BASIC5.98□□□□□ -1.45
SMAD6O43541 THAP12P9-201ENST00000503971 2360 ntBASIC5.98□□□□□ -1.45
SMAD6O43541 POU1F1-201ENST00000344265 1149 ntTSL 5 BASIC5.98□□□□□ -1.45
SMAD6O43541 CLEC12A-202ENST00000350667 699 ntAPPRIS ALT2 TSL 1 (best) BASIC5.98□□□□□ -1.45
SMAD6O43541 AL031985.1-201ENST00000392713 418 ntBASIC5.98□□□□□ -1.45
SMAD6O43541 RN7SKP29-201ENST00000410957 272 ntBASIC5.98□□□□□ -1.45
SMAD6O43541 CASP5-203ENST00000418434 1023 ntTSL 5 BASIC5.98□□□□□ -1.45
SMAD6O43541 MTND6P12-201ENST00000428247 522 ntBASIC5.98□□□□□ -1.45
SMAD6O43541 AC117944.1-201ENST00000430748 641 ntTSL 3 BASIC5.98□□□□□ -1.45
SMAD6O43541 AL663074.2-201ENST00000440621 479 ntBASIC5.98□□□□□ -1.45
SMAD6O43541 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC5.98□□□□□ -1.45
SMAD6O43541 RNF219-AS1-202ENST00000444769 590 ntTSL 4 BASIC5.98□□□□□ -1.45
SMAD6O43541 AC007386.1-201ENST00000455212 582 ntBASIC5.98□□□□□ -1.45
SMAD6O43541 NFU1-207ENST00000462320 558 ntTSL 4 BASIC5.98□□□□□ -1.45
SMAD6O43541 AL157777.1-201ENST00000468100 304 ntBASIC5.98□□□□□ -1.45
SMAD6O43541 AC108941.2-201ENST00000506796 716 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
SMAD6O43541 MTND1P6-201ENST00000523621 946 ntBASIC5.98□□□□□ -1.45
SMAD6O43541 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC5.98□□□□□ -1.45
SMAD6O43541 AP000619.2-201ENST00000546014 969 ntBASIC5.98□□□□□ -1.45
SMAD6O43541 GNG2-208ENST00000554875 430 ntTSL 5 BASIC5.98□□□□□ -1.45
SMAD6O43541 FLVCR2-207ENST00000555027 938 ntTSL 3 BASIC5.98□□□□□ -1.45
SMAD6O43541 AC023908.1-201ENST00000559899 567 ntTSL 4 BASIC5.98□□□□□ -1.45
SMAD6O43541 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC5.98□□□□□ -1.45
SMAD6O43541 FAM27E4-201ENST00000605259 342 ntBASIC5.98□□□□□ -1.45
SMAD6O43541 AL139041.1-201ENST00000605480 610 ntBASIC5.98□□□□□ -1.45
SMAD6O43541 RNU6-84P-201ENST00000607737 102 ntBASIC5.98□□□□□ -1.45
SMAD6O43541 AL352984.2-202ENST00000613699 155 ntBASIC5.98□□□□□ -1.45
SMAD6O43541 CCL4-202ENST00000615863 904 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
SMAD6O43541 AL163152.1-201ENST00000642001 374 ntBASIC5.98□□□□□ -1.45
SMAD6O43541 FBXO25-204ENST00000382824 10386 ntAPPRIS P4 TSL 1 (best) BASIC5.98□□□□□ -1.45
SMAD6O43541 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC5.98□□□□□ -1.45
SMAD6O43541 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 112.7 ms