Protein–RNA interactions for Protein: O43364

HOXA2, Homeobox protein Hox-A2, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA2O43364 AL035443.1-201ENST00000456631 304 ntTSL 3 BASIC8.31□□□□□ -1.08
HOXA2O43364 RPS3AP49-201ENST00000472161 790 ntBASIC8.31□□□□□ -1.08
HOXA2O43364 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC8.31□□□□□ -1.08
HOXA2O43364 AC113383.1-205ENST00000502253 792 ntTSL 2 BASIC8.31□□□□□ -1.08
HOXA2O43364 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC8.31□□□□□ -1.08
HOXA2O43364 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
HOXA2O43364 AC112225.1-201ENST00000508230 297 ntBASIC8.31□□□□□ -1.08
HOXA2O43364 AC095059.2-201ENST00000510601 933 ntBASIC8.31□□□□□ -1.08
HOXA2O43364 AC016559.1-201ENST00000511420 199 ntBASIC8.31□□□□□ -1.08
HOXA2O43364 Y_RNA.704-201ENST00000516851 102 ntBASIC8.31□□□□□ -1.08
HOXA2O43364 AC113423.2-201ENST00000517582 545 ntTSL 2 BASIC8.31□□□□□ -1.08
HOXA2O43364 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC8.31□□□□□ -1.08
HOXA2O43364 AC090150.1-201ENST00000521408 585 ntTSL 4 BASIC8.31□□□□□ -1.08
HOXA2O43364 AP004833.3-201ENST00000531893 322 ntBASIC8.31□□□□□ -1.08
HOXA2O43364 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC8.31□□□□□ -1.08
HOXA2O43364 AC022898.1-202ENST00000560864 806 ntTSL 2 BASIC8.31□□□□□ -1.08
HOXA2O43364 LINC00906-202ENST00000587998 648 ntTSL 3 BASIC8.31□□□□□ -1.08
HOXA2O43364 AC007136.1-201ENST00000589141 199 ntBASIC8.31□□□□□ -1.08
HOXA2O43364 MIR7515HG-254ENST00000593269 943 ntTSL 5 BASIC8.31□□□□□ -1.08
HOXA2O43364 LINC02028-206ENST00000593326 810 ntTSL 5 BASIC8.31□□□□□ -1.08
HOXA2O43364 TAS2R6P-201ENST00000605022 826 ntBASIC8.31□□□□□ -1.08
HOXA2O43364 Metazoa_SRP.167-201ENST00000614947 260 ntBASIC8.31□□□□□ -1.08
HOXA2O43364 MLECP1-201ENST00000615893 709 ntBASIC8.31□□□□□ -1.08
HOXA2O43364 ZNF75A-210ENST00000617839 1225 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
HOXA2O43364 SLC20A1P2-201ENST00000618036 966 ntBASIC8.31□□□□□ -1.08
HOXA2O43364 AC233702.2-201ENST00000618784 583 ntTSL 4 BASIC8.31□□□□□ -1.08
HOXA2O43364 AC103564.3-201ENST00000621194 220 ntBASIC8.31□□□□□ -1.08
HOXA2O43364 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
HOXA2O43364 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC8.31□□□□□ -1.08
HOXA2O43364 AL513321.2-202ENST00000634479 921 ntTSL 5 BASIC8.31□□□□□ -1.08
HOXA2O43364 MPEG1-201ENST00000361050 4442 ntAPPRIS P1 BASIC8.31□□□□□ -1.08
HOXA2O43364 CEACAM6-201ENST00000199764 2700 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
HOXA2O43364 CEP57-207ENST00000537677 1647 ntAPPRIS ALT2 TSL 5 BASIC8.31□□□□□ -1.08
HOXA2O43364 ATP2B1-204ENST00000428670 7032 ntAPPRIS P1 TSL 5 BASIC8.31□□□□□ -1.08
HOXA2O43364 SLC1A2-201ENST00000278379 11696 ntAPPRIS P3 TSL 1 (best) BASIC8.31□□□□□ -1.08
HOXA2O43364 AC023818.2-201ENST00000623817 2304 ntBASIC8.31□□□□□ -1.08
HOXA2O43364 ANKRD20A11P-206ENST00000451663 3717 ntBASIC8.31□□□□□ -1.08
HOXA2O43364 THG1L-201ENST00000231198 3107 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
HOXA2O43364 APBB2-224ENST00000513140 4166 ntAPPRIS P3 TSL 1 (best) BASIC8.31□□□□□ -1.08
HOXA2O43364 SLFN12-202ENST00000394562 2539 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
HOXA2O43364 ZNF225-206ENST00000592780 2538 ntTSL 5 BASIC8.31□□□□□ -1.08
HOXA2O43364 ZNF430-201ENST00000261560 3923 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
HOXA2O43364 BRD7P2-201ENST00000466133 1944 ntBASIC8.31□□□□□ -1.08
HOXA2O43364 AC084816.1-210ENST00000540895 1920 ntTSL 2 BASIC8.31□□□□□ -1.08
HOXA2O43364 AC007923.2-201ENST00000584218 1591 ntBASIC8.31□□□□□ -1.08
HOXA2O43364 CCP110-202ENST00000396208 5151 ntAPPRIS P3 TSL 1 (best) BASIC8.31□□□□□ -1.08
HOXA2O43364 GRIK1-202ENST00000389124 2712 ntTSL 5 BASIC8.31□□□□□ -1.08
HOXA2O43364 GTF2IP1-202ENST00000614592 2047 ntBASIC8.3□□□□□ -1.08
HOXA2O43364 CCDC149-204ENST00000504487 3869 ntAPPRIS ALT2 TSL 2 BASIC8.3□□□□□ -1.08
HOXA2O43364 GABRE-201ENST00000370328 3152 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
HOXA2O43364 MEIOB-205ENST00000470044 1857 ntTSL 2 BASIC8.3□□□□□ -1.08
HOXA2O43364 RC3H1-203ENST00000367696 11261 ntAPPRIS P3 TSL 5 BASIC8.3□□□□□ -1.08
HOXA2O43364 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC8.3□□□□□ -1.08
HOXA2O43364 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC8.3□□□□□ -1.08
HOXA2O43364 RNU4-79P-201ENST00000362764 141 ntBASIC8.3□□□□□ -1.08
HOXA2O43364 NR1I3-203ENST00000367981 1076 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
HOXA2O43364 LELP1-201ENST00000368747 523 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
HOXA2O43364 SSX9-201ENST00000376909 591 ntBASIC8.3□□□□□ -1.08
HOXA2O43364 AL161909.1-201ENST00000397390 712 ntBASIC8.3□□□□□ -1.08
HOXA2O43364 AL512422.1-201ENST00000407033 553 ntBASIC8.3□□□□□ -1.08
HOXA2O43364 RNU6-77P-201ENST00000410554 91 ntBASIC8.3□□□□□ -1.08
HOXA2O43364 RN7SKP30-201ENST00000411373 334 ntBASIC8.3□□□□□ -1.08
HOXA2O43364 BCRP8-201ENST00000412037 255 ntBASIC8.3□□□□□ -1.08
HOXA2O43364 AC074117.1-203ENST00000412749 399 ntTSL 3 BASIC8.3□□□□□ -1.08
HOXA2O43364 VN1R36P-201ENST00000414936 291 ntBASIC8.3□□□□□ -1.08
HOXA2O43364 AC096570.1-201ENST00000419013 569 ntTSL 4 BASIC8.3□□□□□ -1.08
HOXA2O43364 AL121781.1-201ENST00000419863 168 ntTSL 5 BASIC8.3□□□□□ -1.08
HOXA2O43364 AL356583.2-201ENST00000426536 280 ntBASIC8.3□□□□□ -1.08
HOXA2O43364 SNX18P14-201ENST00000429308 574 ntBASIC8.3□□□□□ -1.08
HOXA2O43364 AC007422.1-201ENST00000433065 1008 ntTSL 5 BASIC8.3□□□□□ -1.08
HOXA2O43364 HGF-206ENST00000444829 1184 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
HOXA2O43364 GTF2F2P2-201ENST00000445825 721 ntBASIC8.3□□□□□ -1.08
HOXA2O43364 RPS3AP14-201ENST00000483907 780 ntBASIC8.3□□□□□ -1.08
HOXA2O43364 GLYCTK-AS1-203ENST00000493616 445 ntTSL 3 BASIC8.3□□□□□ -1.08
HOXA2O43364 GAPDHP61-201ENST00000507324 1005 ntBASIC8.3□□□□□ -1.08
HOXA2O43364 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC8.3□□□□□ -1.08
HOXA2O43364 AC111000.3-201ENST00000508057 576 ntBASIC8.3□□□□□ -1.08
HOXA2O43364 NR1I3-226ENST00000508740 977 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
HOXA2O43364 FGF7P4-201ENST00000509595 295 ntBASIC8.3□□□□□ -1.08
HOXA2O43364 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC8.3□□□□□ -1.08
HOXA2O43364 AC021001.1-201ENST00000518703 987 ntBASIC8.3□□□□□ -1.08
HOXA2O43364 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC8.3□□□□□ -1.08
HOXA2O43364 VPS37A-208ENST00000521005 479 ntTSL 3 BASIC8.3□□□□□ -1.08
HOXA2O43364 LINC01146-203ENST00000555996 459 ntTSL 2 BASIC8.3□□□□□ -1.08
HOXA2O43364 AC024614.1-201ENST00000577546 307 ntBASIC8.3□□□□□ -1.08
HOXA2O43364 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC8.3□□□□□ -1.08
HOXA2O43364 TTN-AS1-215ENST00000585451 949 ntTSL 5 BASIC8.3□□□□□ -1.08
HOXA2O43364 AC011447.3-202ENST00000593655 555 ntTSL 4 BASIC8.3□□□□□ -1.08
HOXA2O43364 AC006967.3-201ENST00000594086 1093 ntBASIC8.3□□□□□ -1.08
HOXA2O43364 BNIP3P10-201ENST00000605360 577 ntBASIC8.3□□□□□ -1.08
HOXA2O43364 AL365204.3-201ENST00000612448 685 ntBASIC8.3□□□□□ -1.08
HOXA2O43364 TTN-AS1-265ENST00000627661 806 ntTSL 5 BASIC8.3□□□□□ -1.08
HOXA2O43364 AL357556.1-201ENST00000421884 1388 ntBASIC8.3□□□□□ -1.08
HOXA2O43364 HSPA8P17-201ENST00000427029 1382 ntBASIC8.3□□□□□ -1.08
HOXA2O43364 PPP2R2B-211ENST00000508545 2042 ntTSL 5 BASIC8.3□□□□□ -1.08
HOXA2O43364 NEDD4L-214ENST00000586263 3347 ntAPPRIS ALT2 TSL 1 (best) BASIC8.3□□□□□ -1.08
HOXA2O43364 FANCM-201ENST00000267430 7111 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
HOXA2O43364 NXPE4-202ENST00000424261 1687 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
HOXA2O43364 ZNF577-201ENST00000301399 3074 ntAPPRIS P3 TSL 1 (best) BASIC8.3□□□□□ -1.08
HOXA2O43364 MCPH1-201ENST00000344683 8039 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Retrieved 100 of 98,524 protein–RNA pairs in 75.4 ms