Protein–RNA interactions for Protein: C9J1S8

TRIM49D1, Tripartite motif-containing protein 49D, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D1C9J1S8 NXT1P1-201ENST00000458481 316 ntBASIC5.65□□□□□ -1.5
TRIM49D1C9J1S8 AC090602.1-201ENST00000469695 252 ntBASIC5.65□□□□□ -1.5
TRIM49D1C9J1S8 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC5.65□□□□□ -1.5
TRIM49D1C9J1S8 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC5.65□□□□□ -1.5
TRIM49D1C9J1S8 AC097537.1-201ENST00000514864 1213 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
TRIM49D1C9J1S8 AC091987.1-201ENST00000517758 464 ntTSL 3 BASIC5.65□□□□□ -1.5
TRIM49D1C9J1S8 IGKV3D-25-201ENST00000519599 235 ntBASIC5.65□□□□□ -1.5
TRIM49D1C9J1S8 AC084125.1-201ENST00000525461 429 ntTSL 3 BASIC5.65□□□□□ -1.5
TRIM49D1C9J1S8 AC103843.1-201ENST00000527318 682 ntTSL 4 BASIC5.65□□□□□ -1.5
TRIM49D1C9J1S8 AP004609.2-201ENST00000532177 190 ntBASIC5.65□□□□□ -1.5
TRIM49D1C9J1S8 AP000619.2-201ENST00000546014 969 ntBASIC5.65□□□□□ -1.5
TRIM49D1C9J1S8 AC138207.8-204ENST00000579588 527 ntBASIC5.65□□□□□ -1.5
TRIM49D1C9J1S8 RN7SL230P-201ENST00000580835 303 ntBASIC5.65□□□□□ -1.5
TRIM49D1C9J1S8 AC011468.3-201ENST00000597886 332 ntTSL 3 BASIC5.65□□□□□ -1.5
TRIM49D1C9J1S8 AL022394.1-201ENST00000606979 292 ntBASIC5.65□□□□□ -1.5
TRIM49D1C9J1S8 AC027088.4-201ENST00000611559 1947 ntBASIC5.65□□□□□ -1.51
TRIM49D1C9J1S8 MS4A3-201ENST00000278865 1613 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
TRIM49D1C9J1S8 ATP5A1P1-201ENST00000454088 1321 ntBASIC5.65□□□□□ -1.51
TRIM49D1C9J1S8 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC5.65□□□□□ -1.51
TRIM49D1C9J1S8 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
TRIM49D1C9J1S8 AL390726.6-201ENST00000637760 1654 ntTSL 5 BASIC5.65□□□□□ -1.51
TRIM49D1C9J1S8 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.51
TRIM49D1C9J1S8 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC5.65□□□□□ -1.51
TRIM49D1C9J1S8 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
TRIM49D1C9J1S8 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
TRIM49D1C9J1S8 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.51
TRIM49D1C9J1S8 SAMD13-201ENST00000370668 1403 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
TRIM49D1C9J1S8 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC5.65□□□□□ -1.51
TRIM49D1C9J1S8 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
TRIM49D1C9J1S8 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC5.64□□□□□ -1.51
TRIM49D1C9J1S8 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
TRIM49D1C9J1S8 AF287957.1-201ENST00000607368 1595 ntBASIC5.64□□□□□ -1.51
TRIM49D1C9J1S8 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC5.64□□□□□ -1.51
TRIM49D1C9J1S8 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
TRIM49D1C9J1S8 SCGB3A2-201ENST00000296694 515 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
TRIM49D1C9J1S8 OR4S2-201ENST00000312422 936 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
TRIM49D1C9J1S8 OR11H6-201ENST00000315519 993 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
TRIM49D1C9J1S8 RNA5SP279-201ENST00000365513 117 ntBASIC5.64□□□□□ -1.51
TRIM49D1C9J1S8 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
TRIM49D1C9J1S8 DEFB126-201ENST00000382398 655 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
TRIM49D1C9J1S8 IGLV3-10-201ENST00000390315 382 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
TRIM49D1C9J1S8 PTPN20-208ENST00000395727 790 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
TRIM49D1C9J1S8 MRPL53P1-201ENST00000414323 319 ntBASIC5.64□□□□□ -1.51
TRIM49D1C9J1S8 AC078883.1-203ENST00000416080 654 ntTSL 3 BASIC5.64□□□□□ -1.51
TRIM49D1C9J1S8 AC024601.1-201ENST00000427247 524 ntTSL 3 BASIC5.64□□□□□ -1.51
TRIM49D1C9J1S8 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC5.64□□□□□ -1.51
TRIM49D1C9J1S8 CASP5-205ENST00000444749 1237 ntAPPRIS P1 TSL 2 BASIC5.64□□□□□ -1.51
TRIM49D1C9J1S8 RBMY2AP-201ENST00000445405 1157 ntBASIC5.64□□□□□ -1.51
TRIM49D1C9J1S8 RBMY2CP-201ENST00000448575 1157 ntBASIC5.64□□□□□ -1.51
TRIM49D1C9J1S8 RBMY2DP-202ENST00000448881 1157 ntBASIC5.64□□□□□ -1.51
TRIM49D1C9J1S8 RBMY2BP-202ENST00000451071 1156 ntBASIC5.64□□□□□ -1.51
TRIM49D1C9J1S8 AC013549.1-201ENST00000454086 566 ntTSL 3 BASIC5.64□□□□□ -1.51
TRIM49D1C9J1S8 AC005165.2-201ENST00000466070 380 ntBASIC5.64□□□□□ -1.51
TRIM49D1C9J1S8 AC073610.1-201ENST00000489971 396 ntBASIC5.64□□□□□ -1.51
TRIM49D1C9J1S8 AC008443.2-201ENST00000499096 566 ntTSL 2 BASIC5.64□□□□□ -1.51
TRIM49D1C9J1S8 SCGB3A2-202ENST00000504320 440 ntTSL 3 BASIC5.64□□□□□ -1.51
TRIM49D1C9J1S8 WBP1LP3-201ENST00000523033 208 ntBASIC5.64□□□□□ -1.51
TRIM49D1C9J1S8 AC079064.1-201ENST00000528365 362 ntBASIC5.64□□□□□ -1.51
TRIM49D1C9J1S8 CASP5-209ENST00000531367 879 ntTSL 5 BASIC5.64□□□□□ -1.51
TRIM49D1C9J1S8 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC5.64□□□□□ -1.51
TRIM49D1C9J1S8 RPA2P1-201ENST00000556557 721 ntBASIC5.64□□□□□ -1.51
TRIM49D1C9J1S8 LINC02310-201ENST00000556762 572 ntTSL 4 BASIC5.64□□□□□ -1.51
TRIM49D1C9J1S8 AC023906.3-201ENST00000559825 874 ntTSL 5 BASIC5.64□□□□□ -1.51
TRIM49D1C9J1S8 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC5.64□□□□□ -1.51
TRIM49D1C9J1S8 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC5.64□□□□□ -1.51
TRIM49D1C9J1S8 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC5.64□□□□□ -1.51
TRIM49D1C9J1S8 AC108673.3-201ENST00000609183 335 ntBASIC5.64□□□□□ -1.51
TRIM49D1C9J1S8 MIR6889-201ENST00000613185 59 ntBASIC5.64□□□□□ -1.51
TRIM49D1C9J1S8 MIR6721-201ENST00000617181 87 ntBASIC5.64□□□□□ -1.51
TRIM49D1C9J1S8 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
TRIM49D1C9J1S8 AC005154.1-203ENST00000626245 451 ntTSL 5 BASIC5.64□□□□□ -1.51
TRIM49D1C9J1S8 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC5.64□□□□□ -1.51
TRIM49D1C9J1S8 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC5.64□□□□□ -1.51
TRIM49D1C9J1S8 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
TRIM49D1C9J1S8 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
TRIM49D1C9J1S8 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC5.64□□□□□ -1.51
TRIM49D1C9J1S8 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
TRIM49D1C9J1S8 C11orf1-203ENST00000529270 1437 ntTSL 2 BASIC5.64□□□□□ -1.51
TRIM49D1C9J1S8 PWAR1-201ENST00000624188 2414 ntBASIC5.64□□□□□ -1.51
TRIM49D1C9J1S8 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
TRIM49D1C9J1S8 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC5.64□□□□□ -1.51
TRIM49D1C9J1S8 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC5.63□□□□□ -1.51
TRIM49D1C9J1S8 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
TRIM49D1C9J1S8 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC5.63□□□□□ -1.51
TRIM49D1C9J1S8 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
TRIM49D1C9J1S8 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
TRIM49D1C9J1S8 RBBP4P5-201ENST00000398583 1266 ntBASIC5.63□□□□□ -1.51
TRIM49D1C9J1S8 LYST-AS1-201ENST00000412098 521 ntTSL 3 BASIC5.63□□□□□ -1.51
TRIM49D1C9J1S8 AC073465.2-201ENST00000440938 498 ntBASIC5.63□□□□□ -1.51
TRIM49D1C9J1S8 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
TRIM49D1C9J1S8 AC004692.2-201ENST00000457315 355 ntTSL 3 BASIC5.63□□□□□ -1.51
TRIM49D1C9J1S8 AC044810.1-201ENST00000480271 711 ntBASIC5.63□□□□□ -1.51
TRIM49D1C9J1S8 RN7SL570P-201ENST00000484405 292 ntBASIC5.63□□□□□ -1.51
TRIM49D1C9J1S8 RPL32P33-201ENST00000487023 394 ntBASIC5.63□□□□□ -1.51
TRIM49D1C9J1S8 EDNRA-204ENST00000506066 1032 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
TRIM49D1C9J1S8 AC139720.1-201ENST00000509497 512 ntTSL 3 BASIC5.63□□□□□ -1.51
TRIM49D1C9J1S8 SETP21-201ENST00000514799 892 ntBASIC5.63□□□□□ -1.51
TRIM49D1C9J1S8 IGLV3-24-201ENST00000517477 197 ntBASIC5.63□□□□□ -1.51
TRIM49D1C9J1S8 AC011632.2-201ENST00000520696 738 ntTSL 3 BASIC5.63□□□□□ -1.51
TRIM49D1C9J1S8 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC5.63□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 106.7 ms