Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 BRCC3-209ENST00000620502 882 ntAPPRIS ALT2 TSL 5 BASIC8.03□□□□□ -1.12
TMEM88BA6NKF7 AC127024.6-201ENST00000621598 424 ntBASIC8.03□□□□□ -1.12
TMEM88BA6NKF7 AC007494.3-201ENST00000624660 743 ntBASIC8.03□□□□□ -1.12
TMEM88BA6NKF7 GPR1-AS-201ENST00000623040 3708 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
TMEM88BA6NKF7 SSPO-201ENST00000378016 15589 ntAPPRIS P1 TSL 5 BASIC8.03□□□□□ -1.12
TMEM88BA6NKF7 ILDR2-201ENST00000271417 13140 ntAPPRIS P2 TSL 1 (best) BASIC8.03□□□□□ -1.12
TMEM88BA6NKF7 SLC4A10-201ENST00000272716 3414 ntTSL 5 BASIC8.03□□□□□ -1.12
TMEM88BA6NKF7 GON4L-201ENST00000271883 7138 ntAPPRIS P3 TSL 5 BASIC8.03□□□□□ -1.12
TMEM88BA6NKF7 NACA-216ENST00000550952 2922 ntTSL 2 BASIC8.03□□□□□ -1.12
TMEM88BA6NKF7 ZNF544-206ENST00000596652 2818 ntAPPRIS P3 TSL 1 (best) BASIC8.03□□□□□ -1.12
TMEM88BA6NKF7 ZNF544-217ENST00000600220 2837 ntAPPRIS ALT2 TSL 3 BASIC8.03□□□□□ -1.12
TMEM88BA6NKF7 ZNF207-207ENST00000577908 4672 ntAPPRIS ALT1 TSL 5 BASIC8.03□□□□□ -1.12
TMEM88BA6NKF7 NFASC-204ENST00000401399 10205 ntAPPRIS ALT1 TSL 1 (best) BASIC8.03□□□□□ -1.12
TMEM88BA6NKF7 ABLIM3-202ENST00000326685 4164 ntTSL 5 BASIC8.03□□□□□ -1.12
TMEM88BA6NKF7 RAB27B-201ENST00000262094 7281 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
TMEM88BA6NKF7 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC8.03□□□□□ -1.12
TMEM88BA6NKF7 CYFIP2-201ENST00000435847 3673 ntTSL 2 BASIC8.03□□□□□ -1.12
TMEM88BA6NKF7 NUDT13-202ENST00000357321 2102 ntAPPRIS P1 TSL 5 BASIC8.03□□□□□ -1.12
TMEM88BA6NKF7 LGSN-204ENST00000622415 1612 ntTSL 2 BASIC8.03□□□□□ -1.12
TMEM88BA6NKF7 NUMB-229ENST00000557597 3547 ntAPPRIS P3 TSL 1 (best) BASIC8.03□□□□□ -1.12
TMEM88BA6NKF7 DUXAP8-203ENST00000437781 2398 ntTSL 2 BASIC8.03□□□□□ -1.12
TMEM88BA6NKF7 SERPINB13-202ENST00000344731 3114 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
TMEM88BA6NKF7 RNF139-AS1-201ENST00000499418 5654 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
TMEM88BA6NKF7 SVEP1-202ENST00000374469 12194 ntAPPRIS P2 TSL 5 BASIC8.02□□□□□ -1.12
TMEM88BA6NKF7 EFCAB1-201ENST00000262103 2051 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.12
TMEM88BA6NKF7 APOOL-203ENST00000622540 6466 ntTSL 5 BASIC8.02□□□□□ -1.12
TMEM88BA6NKF7 KPNA6-201ENST00000373625 7378 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
TMEM88BA6NKF7 IL31RA-207ENST00000490985 2414 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
TMEM88BA6NKF7 ADAMTS6-203ENST00000381055 7311 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
TMEM88BA6NKF7 PDZK1-202ENST00000417171 2230 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
TMEM88BA6NKF7 GABRA6-201ENST00000274545 2128 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
TMEM88BA6NKF7 CPNE4-202ENST00000502818 2120 ntTSL 5 BASIC8.02□□□□□ -1.13
TMEM88BA6NKF7 TRIM16-212ENST00000578237 3206 ntAPPRIS P1 TSL 5 BASIC8.02□□□□□ -1.13
TMEM88BA6NKF7 CHD2-201ENST00000394196 9363 ntAPPRIS P1 TSL 5 BASIC8.02□□□□□ -1.13
TMEM88BA6NKF7 SMG1P5-202ENST00000529428 4219 ntBASIC8.02□□□□□ -1.13
TMEM88BA6NKF7 SMG1P2-201ENST00000566127 4221 ntBASIC8.02□□□□□ -1.13
TMEM88BA6NKF7 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC8.02□□□□□ -1.13
TMEM88BA6NKF7 RNU1-84P-201ENST00000365447 164 ntBASIC8.02□□□□□ -1.13
TMEM88BA6NKF7 CFAP70-204ENST00000394865 1222 ntTSL 5 BASIC8.02□□□□□ -1.13
TMEM88BA6NKF7 AC003045.1-201ENST00000398779 713 ntBASIC8.02□□□□□ -1.13
TMEM88BA6NKF7 RNU6-757P-201ENST00000410334 100 ntBASIC8.02□□□□□ -1.13
TMEM88BA6NKF7 TCEA1P4-201ENST00000415066 844 ntBASIC8.02□□□□□ -1.13
TMEM88BA6NKF7 AL359962.1-201ENST00000417969 303 ntTSL 5 BASIC8.02□□□□□ -1.13
TMEM88BA6NKF7 OFD1P11Y-201ENST00000418213 1177 ntBASIC8.02□□□□□ -1.13
TMEM88BA6NKF7 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC8.02□□□□□ -1.13
TMEM88BA6NKF7 FTH1P16-201ENST00000435241 552 ntBASIC8.02□□□□□ -1.13
TMEM88BA6NKF7 AC068888.2-201ENST00000435621 536 ntTSL 3 BASIC8.02□□□□□ -1.13
TMEM88BA6NKF7 AL353706.1-201ENST00000436728 494 ntBASIC8.02□□□□□ -1.13
TMEM88BA6NKF7 XXYLT1-AS2-202ENST00000447975 784 ntTSL 2 BASIC8.02□□□□□ -1.13
TMEM88BA6NKF7 RPL23AP28-201ENST00000448062 470 ntBASIC8.02□□□□□ -1.13
TMEM88BA6NKF7 HNRNPDLP3-201ENST00000456745 380 ntBASIC8.02□□□□□ -1.13
TMEM88BA6NKF7 PGAP2-210ENST00000464441 699 ntTSL 5 BASIC8.02□□□□□ -1.13
TMEM88BA6NKF7 RPL7P1-201ENST00000468161 747 ntBASIC8.02□□□□□ -1.13
TMEM88BA6NKF7 RPL7P9-201ENST00000468715 747 ntBASIC8.02□□□□□ -1.13
TMEM88BA6NKF7 AC026782.2-201ENST00000510845 636 ntBASIC8.02□□□□□ -1.13
TMEM88BA6NKF7 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC8.02□□□□□ -1.13
TMEM88BA6NKF7 AC011352.1-201ENST00000512300 793 ntBASIC8.02□□□□□ -1.13
TMEM88BA6NKF7 AC011405.1-204ENST00000512875 731 ntTSL 5 BASIC8.02□□□□□ -1.13
TMEM88BA6NKF7 MTCO2P32-201ENST00000514865 403 ntBASIC8.02□□□□□ -1.13
TMEM88BA6NKF7 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC8.02□□□□□ -1.13
TMEM88BA6NKF7 AC105185.1-201ENST00000518705 535 ntBASIC8.02□□□□□ -1.13
TMEM88BA6NKF7 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC8.02□□□□□ -1.13
TMEM88BA6NKF7 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC8.02□□□□□ -1.13
TMEM88BA6NKF7 CYCSP25-201ENST00000525280 316 ntBASIC8.02□□□□□ -1.13
TMEM88BA6NKF7 CLEC7A-208ENST00000525605 573 ntTSL 4 BASIC8.02□□□□□ -1.13
TMEM88BA6NKF7 AP001317.1-201ENST00000531194 960 ntBASIC8.02□□□□□ -1.13
TMEM88BA6NKF7 HPS5-207ENST00000537258 1275 ntTSL 5 BASIC8.02□□□□□ -1.13
TMEM88BA6NKF7 TMEM106C-215ENST00000550552 776 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
TMEM88BA6NKF7 OR11H12-201ENST00000550708 1085 ntAPPRIS P1 BASIC8.02□□□□□ -1.13
TMEM88BA6NKF7 BLZF2P-201ENST00000553776 1130 ntBASIC8.02□□□□□ -1.13
TMEM88BA6NKF7 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC8.02□□□□□ -1.13
TMEM88BA6NKF7 MIR4999-201ENST00000585029 91 ntBASIC8.02□□□□□ -1.13
TMEM88BA6NKF7 AC011468.2-202ENST00000594362 579 ntTSL 5 BASIC8.02□□□□□ -1.13
TMEM88BA6NKF7 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC8.02□□□□□ -1.13
TMEM88BA6NKF7 ZNF675-208ENST00000601010 669 ntTSL 5 BASIC8.02□□□□□ -1.13
TMEM88BA6NKF7 AF131215.7-201ENST00000602443 707 ntBASIC8.02□□□□□ -1.13
TMEM88BA6NKF7 AL355333.1-201ENST00000605632 279 ntBASIC8.02□□□□□ -1.13
TMEM88BA6NKF7 AL139286.2-201ENST00000606838 396 ntBASIC8.02□□□□□ -1.13
TMEM88BA6NKF7 Z98949.1-217ENST00000609275 994 ntTSL 5 BASIC8.02□□□□□ -1.13
TMEM88BA6NKF7 AL136295.6-201ENST00000610486 658 ntBASIC8.02□□□□□ -1.13
TMEM88BA6NKF7 CRNDE-214ENST00000637011 865 ntTSL 5 BASIC8.02□□□□□ -1.13
TMEM88BA6NKF7 FOPNL-201ENST00000255759 2275 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
TMEM88BA6NKF7 AC092807.3-203ENST00000467530 2745 ntTSL 2 BASIC8.02□□□□□ -1.13
TMEM88BA6NKF7 LRRC37A2-201ENST00000333412 5177 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
TMEM88BA6NKF7 LINC01653-201ENST00000456026 1728 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
TMEM88BA6NKF7 AC087359.1-201ENST00000508335 1740 ntBASIC8.02□□□□□ -1.13
TMEM88BA6NKF7 NIPA1-202ENST00000437912 7613 ntAPPRIS ALT2 TSL 1 (best) BASIC8.02□□□□□ -1.13
TMEM88BA6NKF7 WDR89-202ENST00000394942 2993 ntAPPRIS P1 TSL 5 BASIC8.02□□□□□ -1.13
TMEM88BA6NKF7 B3GNT2-202ENST00000405767 2436 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
TMEM88BA6NKF7 INPP4B-212ENST00000507861 1506 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
TMEM88BA6NKF7 FRYL-210ENST00000507711 5277 ntTSL 2 BASIC8.02□□□□□ -1.13
TMEM88BA6NKF7 NRG3-202ENST00000372142 3136 ntAPPRIS ALT2 TSL 1 (best) BASIC8.02□□□□□ -1.13
TMEM88BA6NKF7 MAPK10-380ENST00000642015 3137 ntAPPRIS P2 BASIC8.02□□□□□ -1.13
TMEM88BA6NKF7 LAMB4-201ENST00000205386 5857 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
TMEM88BA6NKF7 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC8.02□□□□□ -1.13
TMEM88BA6NKF7 ZNF426-201ENST00000253115 7085 ntAPPRIS P3 TSL 1 (best) BASIC8.02□□□□□ -1.13
TMEM88BA6NKF7 GDA-209ENST00000545168 5362 ntTSL 2 BASIC8.02□□□□□ -1.13
TMEM88BA6NKF7 SLC37A3-202ENST00000340308 2955 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
TMEM88BA6NKF7 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
TMEM88BA6NKF7 DIO2-210ENST00000557010 6367 ntAPPRIS P1 TSL 2 BASIC8.01□□□□□ -1.13
Retrieved 100 of 98,524 protein–RNA pairs in 117.2 ms