Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 RNU5F-6P-201ENST00000362979 116 ntBASIC7.5□□□□□ -1.21
PCDHGA11Q9Y5H2 RNU6-1066P-201ENST00000363573 105 ntBASIC7.5□□□□□ -1.21
PCDHGA11Q9Y5H2 SNORA10B-201ENST00000384458 133 ntBASIC7.5□□□□□ -1.21
PCDHGA11Q9Y5H2 RNU6-297P-201ENST00000384636 107 ntBASIC7.5□□□□□ -1.21
PCDHGA11Q9Y5H2 RNU6-248P-201ENST00000410720 107 ntBASIC7.5□□□□□ -1.21
PCDHGA11Q9Y5H2 RPLP1P10-201ENST00000413972 339 ntBASIC7.5□□□□□ -1.21
PCDHGA11Q9Y5H2 YBX1P8-201ENST00000421881 943 ntBASIC7.5□□□□□ -1.21
PCDHGA11Q9Y5H2 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC7.5□□□□□ -1.21
PCDHGA11Q9Y5H2 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC7.5□□□□□ -1.21
PCDHGA11Q9Y5H2 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC7.5□□□□□ -1.21
PCDHGA11Q9Y5H2 OSTCP2-201ENST00000437956 444 ntBASIC7.5□□□□□ -1.21
PCDHGA11Q9Y5H2 NFIA-AS2-203ENST00000438559 1275 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
PCDHGA11Q9Y5H2 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC7.5□□□□□ -1.21
PCDHGA11Q9Y5H2 AC239798.1-201ENST00000449024 1176 ntBASIC7.5□□□□□ -1.21
PCDHGA11Q9Y5H2 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC7.5□□□□□ -1.21
PCDHGA11Q9Y5H2 TNR-IT1-201ENST00000455447 630 ntTSL 3 BASIC7.5□□□□□ -1.21
PCDHGA11Q9Y5H2 AC234782.3-201ENST00000461229 433 ntBASIC7.5□□□□□ -1.21
PCDHGA11Q9Y5H2 AC021205.1-201ENST00000468797 348 ntBASIC7.5□□□□□ -1.21
PCDHGA11Q9Y5H2 AC104831.1-201ENST00000470024 444 ntTSL 3 BASIC7.5□□□□□ -1.21
PCDHGA11Q9Y5H2 LINC00518-202ENST00000479822 906 ntTSL 3 BASIC7.5□□□□□ -1.21
PCDHGA11Q9Y5H2 CYB5A-204ENST00000494131 776 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
PCDHGA11Q9Y5H2 AC107956.2-201ENST00000496042 454 ntBASIC7.5□□□□□ -1.21
PCDHGA11Q9Y5H2 MTCYBP17-201ENST00000503579 789 ntBASIC7.5□□□□□ -1.21
PCDHGA11Q9Y5H2 AC108866.1-203ENST00000504106 529 ntTSL 3 BASIC7.5□□□□□ -1.21
PCDHGA11Q9Y5H2 AC111198.1-201ENST00000505575 606 ntTSL 4 BASIC7.5□□□□□ -1.21
PCDHGA11Q9Y5H2 SNX5P1-201ENST00000505757 1041 ntBASIC7.5□□□□□ -1.21
PCDHGA11Q9Y5H2 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC7.5□□□□□ -1.21
PCDHGA11Q9Y5H2 GAPDHP31-201ENST00000509325 1014 ntBASIC7.5□□□□□ -1.21
PCDHGA11Q9Y5H2 RNU6-358P-201ENST00000516564 75 ntBASIC7.5□□□□□ -1.21
PCDHGA11Q9Y5H2 AC090150.1-201ENST00000521408 585 ntTSL 4 BASIC7.5□□□□□ -1.21
PCDHGA11Q9Y5H2 PTTG3P-201ENST00000521862 606 ntBASIC7.5□□□□□ -1.21
PCDHGA11Q9Y5H2 LRP4-AS1-202ENST00000531719 731 ntTSL 4 BASIC7.5□□□□□ -1.21
PCDHGA11Q9Y5H2 OR8L1P-201ENST00000534005 955 ntBASIC7.5□□□□□ -1.21
PCDHGA11Q9Y5H2 LRTOMT-212ENST00000536917 579 ntTSL 3 BASIC7.5□□□□□ -1.21
PCDHGA11Q9Y5H2 IGHV1OR15-4-201ENST00000560037 348 ntBASIC7.5□□□□□ -1.21
PCDHGA11Q9Y5H2 AC109460.4-201ENST00000561471 454 ntTSL 3 BASIC7.5□□□□□ -1.21
PCDHGA11Q9Y5H2 C16orf45-203ENST00000561692 534 ntTSL 3 BASIC7.5□□□□□ -1.21
PCDHGA11Q9Y5H2 AC034105.2-201ENST00000561866 238 ntBASIC7.5□□□□□ -1.21
PCDHGA11Q9Y5H2 SAXO2-204ENST00000565432 811 ntAPPRIS ALT2 TSL 4 BASIC7.5□□□□□ -1.21
PCDHGA11Q9Y5H2 RN7SL123P-201ENST00000577239 292 ntBASIC7.5□□□□□ -1.21
PCDHGA11Q9Y5H2 TTN-AS1-210ENST00000578746 677 ntTSL 3 BASIC7.5□□□□□ -1.21
PCDHGA11Q9Y5H2 AC010618.3-203ENST00000595116 313 ntTSL 3 BASIC7.5□□□□□ -1.21
PCDHGA11Q9Y5H2 OR7A18P-201ENST00000600416 277 ntBASIC7.5□□□□□ -1.21
PCDHGA11Q9Y5H2 AC063977.5-201ENST00000601044 974 ntBASIC7.5□□□□□ -1.21
PCDHGA11Q9Y5H2 EDRF1-AS1-205ENST00000601363 712 ntTSL 5 BASIC7.5□□□□□ -1.21
PCDHGA11Q9Y5H2 AL356052.1-201ENST00000605764 376 ntBASIC7.5□□□□□ -1.21
PCDHGA11Q9Y5H2 VDAC1P8-210ENST00000610068 1251 ntTSL 5 BASIC7.5□□□□□ -1.21
PCDHGA11Q9Y5H2 AL451054.3-201ENST00000611115 776 ntBASIC7.5□□□□□ -1.21
PCDHGA11Q9Y5H2 AC131902.3-201ENST00000611767 581 ntBASIC7.5□□□□□ -1.21
PCDHGA11Q9Y5H2 AC114546.4-201ENST00000624413 369 ntBASIC7.5□□□□□ -1.21
PCDHGA11Q9Y5H2 AC093909.6-201ENST00000624757 775 ntBASIC7.5□□□□□ -1.21
PCDHGA11Q9Y5H2 AC134981.1-201ENST00000628076 348 ntBASIC7.5□□□□□ -1.21
PCDHGA11Q9Y5H2 SPRR5-201ENST00000636302 817 ntAPPRIS P1 TSL 5 BASIC7.5□□□□□ -1.21
PCDHGA11Q9Y5H2 DIP2B-201ENST00000301180 8593 ntAPPRIS P1 TSL 5 BASIC7.5□□□□□ -1.21
PCDHGA11Q9Y5H2 IGF1-206ENST00000456098 7370 ntTSL 5 BASIC7.5□□□□□ -1.21
PCDHGA11Q9Y5H2 TLR10-202ENST00000361424 3484 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
PCDHGA11Q9Y5H2 TM4SF1-201ENST00000305366 1771 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
PCDHGA11Q9Y5H2 GLRA3-201ENST00000274093 8770 ntAPPRIS P3 TSL 1 (best) BASIC7.5□□□□□ -1.21
PCDHGA11Q9Y5H2 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC7.5□□□□□ -1.21
PCDHGA11Q9Y5H2 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC7.5□□□□□ -1.21
PCDHGA11Q9Y5H2 TMEM116-201ENST00000355445 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC7.5□□□□□ -1.21
PCDHGA11Q9Y5H2 CYP1D1P-201ENST00000416662 1433 ntBASIC7.5□□□□□ -1.21
PCDHGA11Q9Y5H2 ABCC4-201ENST00000376887 5839 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
PCDHGA11Q9Y5H2 CTAGE1-201ENST00000391403 4313 ntAPPRIS P2 BASIC7.5□□□□□ -1.21
PCDHGA11Q9Y5H2 THOC2-220ENST00000618150 3211 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
PCDHGA11Q9Y5H2 FAT2-201ENST00000261800 14534 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
PCDHGA11Q9Y5H2 SUPT20H-224ENST00000542180 2478 ntAPPRIS ALT2 TSL 5 BASIC7.5□□□□□ -1.21
PCDHGA11Q9Y5H2 WDR44-202ENST00000371822 3877 ntTSL 2 BASIC7.5□□□□□ -1.21
PCDHGA11Q9Y5H2 KCNMB3P1-202ENST00000493696 3389 ntBASIC7.5□□□□□ -1.21
PCDHGA11Q9Y5H2 ZNF10-202ENST00000402932 1967 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
PCDHGA11Q9Y5H2 LINC01095-202ENST00000507726 1715 ntTSL 2 BASIC7.49□□□□□ -1.21
PCDHGA11Q9Y5H2 LCP1-201ENST00000323076 3787 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
PCDHGA11Q9Y5H2 HIPK1-201ENST00000340480 6997 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
PCDHGA11Q9Y5H2 LRIG3-202ENST00000379141 3667 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
PCDHGA11Q9Y5H2 RIF1-206ENST00000453091 8053 ntAPPRIS ALT2 TSL 1 (best) BASIC7.49□□□□□ -1.21
PCDHGA11Q9Y5H2 NBPF26-204ENST00000615145 2656 ntTSL 5 BASIC7.49□□□□□ -1.21
PCDHGA11Q9Y5H2 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC7.49□□□□□ -1.21
PCDHGA11Q9Y5H2 RAI14-228ENST00000515799 3486 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
PCDHGA11Q9Y5H2 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
PCDHGA11Q9Y5H2 MITF-201ENST00000314557 1798 ntAPPRIS ALT1 TSL 1 (best) BASIC7.49□□□□□ -1.21
PCDHGA11Q9Y5H2 ADGRL3-207ENST00000507625 4843 ntAPPRIS ALT2 TSL 5 BASIC7.49□□□□□ -1.21
PCDHGA11Q9Y5H2 C5orf64-203ENST00000505642 2970 ntTSL 2 BASIC7.49□□□□□ -1.21
PCDHGA11Q9Y5H2 CAST-202ENST00000325674 3356 ntTSL 5 BASIC7.49□□□□□ -1.21
PCDHGA11Q9Y5H2 HDAC9-201ENST00000401921 3254 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
PCDHGA11Q9Y5H2 ATP9B-208ENST00000586722 1650 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
PCDHGA11Q9Y5H2 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
PCDHGA11Q9Y5H2 RNU6-839P-201ENST00000363347 108 ntBASIC7.49□□□□□ -1.21
PCDHGA11Q9Y5H2 RNA5SP263-201ENST00000363376 128 ntBASIC7.49□□□□□ -1.21
PCDHGA11Q9Y5H2 RNU5E-5P-201ENST00000365379 116 ntBASIC7.49□□□□□ -1.21
PCDHGA11Q9Y5H2 SSX9-201ENST00000376909 591 ntBASIC7.49□□□□□ -1.21
PCDHGA11Q9Y5H2 S100A13-202ENST00000392622 547 ntAPPRIS P1 TSL 2 BASIC7.49□□□□□ -1.21
PCDHGA11Q9Y5H2 AC008171.1-201ENST00000395058 200 ntBASIC7.49□□□□□ -1.21
PCDHGA11Q9Y5H2 RPL23AP47-201ENST00000408017 460 ntBASIC7.49□□□□□ -1.21
PCDHGA11Q9Y5H2 LSM5-202ENST00000409292 538 ntTSL 2 BASIC7.49□□□□□ -1.21
PCDHGA11Q9Y5H2 LINC01353-201ENST00000412772 775 ntTSL 3 BASIC7.49□□□□□ -1.21
PCDHGA11Q9Y5H2 AL450992.3-201ENST00000413192 568 ntBASIC7.49□□□□□ -1.21
PCDHGA11Q9Y5H2 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC7.49□□□□□ -1.21
PCDHGA11Q9Y5H2 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC7.49□□□□□ -1.21
PCDHGA11Q9Y5H2 LINC00665-202ENST00000427868 690 ntTSL 3 BASIC7.49□□□□□ -1.21
PCDHGA11Q9Y5H2 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 79.4 ms