Protein–RNA interactions for Protein: Q9UBK2

PPARGC1A, Peroxisome proliferator-activated receptor gamma coactivator 1-alpha, humanhuman

Known RBP Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1AQ9UBK2 SUCLA2P2-201ENST00000417269 1309 ntBASIC6.82□□□□□ -1.32
PPARGC1AQ9UBK2 MFSD8-213ENST00000641134 1327 ntBASIC6.82□□□□□ -1.32
PPARGC1AQ9UBK2 BBOX1-205ENST00000529202 1725 ntAPPRIS P1 TSL 5 BASIC6.82□□□□□ -1.32
PPARGC1AQ9UBK2 ZNF33B-201ENST00000359467 5958 ntAPPRIS P2 TSL 1 (best) BASIC6.82□□□□□ -1.32
PPARGC1AQ9UBK2 DOCK9-208ENST00000448493 7887 ntAPPRIS ALT2 TSL 5 BASIC6.82□□□□□ -1.32
PPARGC1AQ9UBK2 TMC7-202ENST00000421369 4499 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
PPARGC1AQ9UBK2 C4orf26-201ENST00000311623 1874 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
PPARGC1AQ9UBK2 CR382285.2-201ENST00000624662 1495 ntBASIC6.82□□□□□ -1.32
PPARGC1AQ9UBK2 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
PPARGC1AQ9UBK2 MRPS6P2-201ENST00000381143 370 ntBASIC6.82□□□□□ -1.32
PPARGC1AQ9UBK2 TRDC-201ENST00000390477 720 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
PPARGC1AQ9UBK2 AL096711.1-201ENST00000404780 554 ntBASIC6.82□□□□□ -1.32
PPARGC1AQ9UBK2 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC6.82□□□□□ -1.32
PPARGC1AQ9UBK2 AC084030.1-202ENST00000413385 880 ntTSL 5 BASIC6.82□□□□□ -1.32
PPARGC1AQ9UBK2 AC093158.1-201ENST00000415549 791 ntTSL 3 BASIC6.82□□□□□ -1.32
PPARGC1AQ9UBK2 MTCYBP7-201ENST00000419540 1134 ntBASIC6.82□□□□□ -1.32
PPARGC1AQ9UBK2 MTND2P18-201ENST00000419962 1030 ntBASIC6.82□□□□□ -1.32
PPARGC1AQ9UBK2 AC073052.1-201ENST00000440417 714 ntBASIC6.82□□□□□ -1.32
PPARGC1AQ9UBK2 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC6.82□□□□□ -1.32
PPARGC1AQ9UBK2 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC6.82□□□□□ -1.32
PPARGC1AQ9UBK2 RPS27P5-201ENST00000444247 244 ntBASIC6.82□□□□□ -1.32
PPARGC1AQ9UBK2 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC6.82□□□□□ -1.32
PPARGC1AQ9UBK2 PHKA2-AS1-202ENST00000452900 656 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
PPARGC1AQ9UBK2 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC6.82□□□□□ -1.32
PPARGC1AQ9UBK2 AC092436.4-201ENST00000510905 483 ntTSL 3 BASIC6.82□□□□□ -1.32
PPARGC1AQ9UBK2 AL049544.1-201ENST00000511849 673 ntTSL 3 BASIC6.82□□□□□ -1.32
PPARGC1AQ9UBK2 AC110760.1-201ENST00000513770 590 ntTSL 3 BASIC6.82□□□□□ -1.32
PPARGC1AQ9UBK2 SCARNA5-201ENST00000516201 276 ntBASIC6.82□□□□□ -1.32
PPARGC1AQ9UBK2 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC6.82□□□□□ -1.32
PPARGC1AQ9UBK2 IGHV3-57-201ENST00000520143 280 ntBASIC6.82□□□□□ -1.32
PPARGC1AQ9UBK2 LINC02237-201ENST00000521753 805 ntTSL 3 BASIC6.82□□□□□ -1.32
PPARGC1AQ9UBK2 TBCA-209ENST00000522370 435 ntTSL 3 BASIC6.82□□□□□ -1.32
PPARGC1AQ9UBK2 AP002815.1-201ENST00000533740 386 ntTSL 3 BASIC6.82□□□□□ -1.32
PPARGC1AQ9UBK2 AC156455.1-201ENST00000538790 851 ntTSL 2 BASIC6.82□□□□□ -1.32
PPARGC1AQ9UBK2 AL161757.4-202ENST00000557467 737 ntTSL 3 BASIC6.82□□□□□ -1.32
PPARGC1AQ9UBK2 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC6.82□□□□□ -1.32
PPARGC1AQ9UBK2 RPARP-AS1-204ENST00000594818 445 ntTSL 3 BASIC6.82□□□□□ -1.32
PPARGC1AQ9UBK2 AC097467.3-216ENST00000599555 1293 ntTSL 5 BASIC6.82□□□□□ -1.32
PPARGC1AQ9UBK2 AC073137.1-201ENST00000605636 634 ntBASIC6.82□□□□□ -1.32
PPARGC1AQ9UBK2 AC015922.4-201ENST00000612568 690 ntBASIC6.82□□□□□ -1.32
PPARGC1AQ9UBK2 CNTNAP3P1-201ENST00000616657 906 ntBASIC6.82□□□□□ -1.32
PPARGC1AQ9UBK2 AC211486.4-201ENST00000621495 113 ntBASIC6.82□□□□□ -1.32
PPARGC1AQ9UBK2 AC018692.2-201ENST00000624130 348 ntBASIC6.82□□□□□ -1.32
PPARGC1AQ9UBK2 AC114546.4-201ENST00000624413 369 ntBASIC6.82□□□□□ -1.32
PPARGC1AQ9UBK2 RACK1-235ENST00000626067 564 ntTSL 2 BASIC6.82□□□□□ -1.32
PPARGC1AQ9UBK2 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC6.82□□□□□ -1.32
PPARGC1AQ9UBK2 CA1-225ENST00000626824 2405 ntTSL 5 BASIC6.82□□□□□ -1.32
PPARGC1AQ9UBK2 FOXM1-202ENST00000359843 3315 ntAPPRIS P4 TSL 1 (best) BASIC6.82□□□□□ -1.32
PPARGC1AQ9UBK2 ZNF813-201ENST00000396403 6151 ntAPPRIS P1 TSL 3 BASIC6.82□□□□□ -1.32
PPARGC1AQ9UBK2 GOLGB1-202ENST00000393667 11198 ntAPPRIS ALT2 TSL 1 (best) BASIC6.82□□□□□ -1.32
PPARGC1AQ9UBK2 UEVLD-202ENST00000320750 1799 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
PPARGC1AQ9UBK2 EIF5AL1-201ENST00000520547 3840 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
PPARGC1AQ9UBK2 GTDC1-212ENST00000463875 1563 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
PPARGC1AQ9UBK2 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
PPARGC1AQ9UBK2 SAMM50P1-201ENST00000455403 1399 ntBASIC6.82□□□□□ -1.32
PPARGC1AQ9UBK2 SRSF3-202ENST00000373715 4222 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
PPARGC1AQ9UBK2 PSG5-210ENST00000599812 1884 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
PPARGC1AQ9UBK2 DYNC2LI1-210ENST00000605786 1346 ntAPPRIS ALT1 TSL 1 (best) BASIC6.81□□□□□ -1.32
PPARGC1AQ9UBK2 NUP153-201ENST00000262077 5487 ntAPPRIS P3 TSL 1 (best) BASIC6.81□□□□□ -1.32
PPARGC1AQ9UBK2 ZNF227-201ENST00000313040 3043 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
PPARGC1AQ9UBK2 PSG11-201ENST00000306322 990 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
PPARGC1AQ9UBK2 OR2M1P-201ENST00000318104 951 ntBASIC6.81□□□□□ -1.32
PPARGC1AQ9UBK2 HHLA3-201ENST00000359875 898 ntAPPRIS ALT2 TSL 1 (best) BASIC6.81□□□□□ -1.32
PPARGC1AQ9UBK2 SNORA7A-201ENST00000384765 139 ntBASIC6.81□□□□□ -1.32
PPARGC1AQ9UBK2 MIR551B-201ENST00000384984 96 ntBASIC6.81□□□□□ -1.32
PPARGC1AQ9UBK2 RPL12P23-201ENST00000405880 490 ntBASIC6.81□□□□□ -1.32
PPARGC1AQ9UBK2 RNU2-17P-201ENST00000410290 190 ntBASIC6.81□□□□□ -1.32
PPARGC1AQ9UBK2 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC6.81□□□□□ -1.32
PPARGC1AQ9UBK2 DPP10-AS3-201ENST00000417844 665 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
PPARGC1AQ9UBK2 ICA1L-206ENST00000418208 602 ntTSL 4 BASIC6.81□□□□□ -1.32
PPARGC1AQ9UBK2 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC6.81□□□□□ -1.32
PPARGC1AQ9UBK2 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC6.81□□□□□ -1.32
PPARGC1AQ9UBK2 AL451136.1-201ENST00000435399 325 ntBASIC6.81□□□□□ -1.32
PPARGC1AQ9UBK2 MTND4P32-201ENST00000437189 1237 ntBASIC6.81□□□□□ -1.32
PPARGC1AQ9UBK2 AL138767.3-201ENST00000438082 495 ntTSL 3 BASIC6.81□□□□□ -1.32
PPARGC1AQ9UBK2 COL11A2P1-205ENST00000441798 676 ntBASIC6.81□□□□□ -1.32
PPARGC1AQ9UBK2 BCAP29-207ENST00000445771 1157 ntTSL 5 BASIC6.81□□□□□ -1.32
PPARGC1AQ9UBK2 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC6.81□□□□□ -1.32
PPARGC1AQ9UBK2 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC6.81□□□□□ -1.32
PPARGC1AQ9UBK2 VAMP3-202ENST00000470357 954 ntTSL 3 BASIC6.81□□□□□ -1.32
PPARGC1AQ9UBK2 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC6.81□□□□□ -1.32
PPARGC1AQ9UBK2 LINC02224-201ENST00000505706 584 ntTSL 4 BASIC6.81□□□□□ -1.32
PPARGC1AQ9UBK2 RNU6-1028P-201ENST00000517164 93 ntBASIC6.81□□□□□ -1.32
PPARGC1AQ9UBK2 AC008708.1-201ENST00000517346 474 ntTSL 3 BASIC6.81□□□□□ -1.32
PPARGC1AQ9UBK2 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC6.81□□□□□ -1.32
PPARGC1AQ9UBK2 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC6.81□□□□□ -1.32
PPARGC1AQ9UBK2 LRRC6P1-201ENST00000532188 885 ntBASIC6.81□□□□□ -1.32
PPARGC1AQ9UBK2 AC090592.1-202ENST00000533049 568 ntTSL 4 BASIC6.81□□□□□ -1.32
PPARGC1AQ9UBK2 PATE4-203ENST00000534411 897 ntAPPRIS ALT2 TSL 1 (best) BASIC6.81□□□□□ -1.32
PPARGC1AQ9UBK2 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC6.81□□□□□ -1.32
PPARGC1AQ9UBK2 STRADA-207ENST00000578008 1153 ntTSL 5 BASIC6.81□□□□□ -1.32
PPARGC1AQ9UBK2 AL157938.2-205ENST00000586290 891 ntTSL 5 BASIC6.81□□□□□ -1.32
PPARGC1AQ9UBK2 AC008794.1-201ENST00000593063 560 ntTSL 4 BASIC6.81□□□□□ -1.32
PPARGC1AQ9UBK2 AL356986.1-201ENST00000604085 341 ntBASIC6.81□□□□□ -1.32
PPARGC1AQ9UBK2 AL592494.3-201ENST00000609485 464 ntBASIC6.81□□□□□ -1.32
PPARGC1AQ9UBK2 HOXA11-AS1_3.1-201ENST00000613383 98 ntBASIC6.81□□□□□ -1.32
PPARGC1AQ9UBK2 OR1N2-202ENST00000616791 993 ntAPPRIS P2 BASIC6.81□□□□□ -1.32
PPARGC1AQ9UBK2 LINC01440-210ENST00000629744 541 ntTSL 5 BASIC6.81□□□□□ -1.32
PPARGC1AQ9UBK2 CLUHP10-201ENST00000631979 980 ntBASIC6.81□□□□□ -1.32
PPARGC1AQ9UBK2 AL049767.1-201ENST00000636811 514 ntTSL 5 BASIC6.81□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 77.4 ms