Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 UVRAG-205ENST00000528420 2463 ntTSL 2 BASIC5.19□□□□□ -1.58
CLCF1Q9UBD9 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
CLCF1Q9UBD9 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
CLCF1Q9UBD9 BX284613.1-201ENST00000452221 1641 ntBASIC5.19□□□□□ -1.58
CLCF1Q9UBD9 ACOD1-202ENST00000449753 2097 ntAPPRIS ALT2 TSL 3 BASIC5.19□□□□□ -1.58
CLCF1Q9UBD9 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC5.19□□□□□ -1.58
CLCF1Q9UBD9 ZCCHC6-201ENST00000277141 5724 ntTSL 2 BASIC5.18□□□□□ -1.58
CLCF1Q9UBD9 PMFBP1-207ENST00000537465 3935 ntAPPRIS ALT2 TSL 2 BASIC5.18□□□□□ -1.58
CLCF1Q9UBD9 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
CLCF1Q9UBD9 SGIP1-201ENST00000237247 3997 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
CLCF1Q9UBD9 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC5.18□□□□□ -1.58
CLCF1Q9UBD9 FSCB-201ENST00000340446 2938 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
CLCF1Q9UBD9 ASAH1-232ENST00000636691 2472 ntTSL 5 BASIC5.18□□□□□ -1.58
CLCF1Q9UBD9 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
CLCF1Q9UBD9 LINC02523-201ENST00000423208 2963 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
CLCF1Q9UBD9 NSF-206ENST00000575068 2667 ntTSL 2 BASIC5.18□□□□□ -1.58
CLCF1Q9UBD9 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC5.18□□□□□ -1.58
CLCF1Q9UBD9 GTDC1-207ENST00000409298 2209 ntTSL 5 BASIC5.18□□□□□ -1.58
CLCF1Q9UBD9 RNA5SP46-201ENST00000362370 120 ntBASIC5.18□□□□□ -1.58
CLCF1Q9UBD9 AL357752.1-201ENST00000412817 349 ntBASIC5.18□□□□□ -1.58
CLCF1Q9UBD9 AL390115.1-201ENST00000425271 423 ntTSL 5 BASIC5.18□□□□□ -1.58
CLCF1Q9UBD9 KATNBL1P2-201ENST00000433311 835 ntBASIC5.18□□□□□ -1.58
CLCF1Q9UBD9 LINC01798-204ENST00000433396 682 ntTSL 3 BASIC5.18□□□□□ -1.58
CLCF1Q9UBD9 AC015983.1-201ENST00000441577 373 ntBASIC5.18□□□□□ -1.58
CLCF1Q9UBD9 LRRC37A14P-201ENST00000452297 462 ntBASIC5.18□□□□□ -1.58
CLCF1Q9UBD9 AL445687.2-201ENST00000458156 728 ntBASIC5.18□□□□□ -1.58
CLCF1Q9UBD9 AC018638.3-201ENST00000461273 132 ntBASIC5.18□□□□□ -1.58
CLCF1Q9UBD9 AL355032.1-201ENST00000472981 438 ntBASIC5.18□□□□□ -1.58
CLCF1Q9UBD9 EPDR1-204ENST00000476620 555 ntTSL 4 BASIC5.18□□□□□ -1.58
CLCF1Q9UBD9 OR7E157P-201ENST00000494376 911 ntBASIC5.18□□□□□ -1.58
CLCF1Q9UBD9 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC5.18□□□□□ -1.58
CLCF1Q9UBD9 SSX6-203ENST00000509958 336 ntTSL 3 BASIC5.18□□□□□ -1.58
CLCF1Q9UBD9 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC5.18□□□□□ -1.58
CLCF1Q9UBD9 MIR2117-201ENST00000516780 80 ntBASIC5.18□□□□□ -1.58
CLCF1Q9UBD9 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC5.18□□□□□ -1.58
CLCF1Q9UBD9 AL157756.1-203ENST00000553269 600 ntTSL 3 BASIC5.18□□□□□ -1.58
CLCF1Q9UBD9 C15orf41-204ENST00000562877 764 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
CLCF1Q9UBD9 DPPA2P4-201ENST00000563717 878 ntBASIC5.18□□□□□ -1.58
CLCF1Q9UBD9 AC114488.3-201ENST00000581333 480 ntTSL 4 BASIC5.18□□□□□ -1.58
CLCF1Q9UBD9 AC002398.1-201ENST00000589397 427 ntTSL 5 BASIC5.18□□□□□ -1.58
CLCF1Q9UBD9 AC010809.3-201ENST00000621310 641 ntBASIC5.18□□□□□ -1.58
CLCF1Q9UBD9 HORMAD2-202ENST00000403975 2115 ntAPPRIS P1 TSL 2 BASIC5.18□□□□□ -1.58
CLCF1Q9UBD9 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
CLCF1Q9UBD9 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC5.18□□□□□ -1.58
CLCF1Q9UBD9 AC099654.3-201ENST00000447087 1546 ntBASIC5.18□□□□□ -1.58
CLCF1Q9UBD9 AC098679.1-203ENST00000505532 2227 ntTSL 2 BASIC5.17□□□□□ -1.58
CLCF1Q9UBD9 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC5.17□□□□□ -1.58
CLCF1Q9UBD9 ASAH2-203ENST00000443575 1942 ntTSL 5 BASIC5.17□□□□□ -1.58
CLCF1Q9UBD9 NOSTRIN-207ENST00000445023 1569 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
CLCF1Q9UBD9 PSMC6-219ENST00000612399 1590 ntAPPRIS P2 TSL 1 (best) BASIC5.17□□□□□ -1.58
CLCF1Q9UBD9 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
CLCF1Q9UBD9 NLN-202ENST00000502464 8354 ntTSL 5 BASIC5.17□□□□□ -1.58
CLCF1Q9UBD9 SNORA64.1-201ENST00000362600 132 ntBASIC5.17□□□□□ -1.58
CLCF1Q9UBD9 RBMS3-AS2-201ENST00000366321 582 ntTSL 3 BASIC5.17□□□□□ -1.58
CLCF1Q9UBD9 AL121835.1-201ENST00000404250 354 ntBASIC5.17□□□□□ -1.58
CLCF1Q9UBD9 OR2AT2P-201ENST00000413438 905 ntBASIC5.17□□□□□ -1.58
CLCF1Q9UBD9 BMS1P17-202ENST00000416720 316 ntBASIC5.17□□□□□ -1.58
CLCF1Q9UBD9 GPC5-AS2-201ENST00000417589 401 ntTSL 3 BASIC5.17□□□□□ -1.58
CLCF1Q9UBD9 AC009498.1-201ENST00000419860 541 ntTSL 4 BASIC5.17□□□□□ -1.58
CLCF1Q9UBD9 AC019205.1-201ENST00000421830 730 ntBASIC5.17□□□□□ -1.58
CLCF1Q9UBD9 HMGB3P24-201ENST00000433260 622 ntBASIC5.17□□□□□ -1.58
CLCF1Q9UBD9 AL139280.1-201ENST00000436340 463 ntTSL 3 BASIC5.17□□□□□ -1.58
CLCF1Q9UBD9 AC002504.1-201ENST00000438281 691 ntBASIC5.17□□□□□ -1.58
CLCF1Q9UBD9 YWHAEP1-201ENST00000453697 763 ntBASIC5.17□□□□□ -1.58
CLCF1Q9UBD9 FRG2FP-204ENST00000453982 852 ntBASIC5.17□□□□□ -1.58
CLCF1Q9UBD9 RPSAP39-201ENST00000467439 883 ntBASIC5.17□□□□□ -1.58
CLCF1Q9UBD9 OSMR-AS1-201ENST00000506463 800 ntTSL 3 BASIC5.17□□□□□ -1.58
CLCF1Q9UBD9 AC138866.2-201ENST00000508650 584 ntBASIC5.17□□□□□ -1.58
CLCF1Q9UBD9 AC011396.3-201ENST00000508845 512 ntTSL 3 BASIC5.17□□□□□ -1.58
CLCF1Q9UBD9 AC011411.1-201ENST00000509592 876 ntBASIC5.17□□□□□ -1.58
CLCF1Q9UBD9 OR51A1P-201ENST00000511110 946 ntBASIC5.17□□□□□ -1.58
CLCF1Q9UBD9 RNU6-615P-201ENST00000516065 106 ntBASIC5.17□□□□□ -1.58
CLCF1Q9UBD9 SCARNA6.1-201ENST00000516989 238 ntBASIC5.17□□□□□ -1.58
CLCF1Q9UBD9 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC5.17□□□□□ -1.58
CLCF1Q9UBD9 AP003086.3-201ENST00000527030 365 ntTSL 3 BASIC5.17□□□□□ -1.58
CLCF1Q9UBD9 HMGB1P42-201ENST00000532126 553 ntBASIC5.17□□□□□ -1.58
CLCF1Q9UBD9 OR4A6P-201ENST00000534364 970 ntBASIC5.17□□□□□ -1.58
CLCF1Q9UBD9 SNHG1-211ENST00000539921 1071 ntTSL 2 BASIC5.17□□□□□ -1.58
CLCF1Q9UBD9 DCTN5-207ENST00000568272 523 ntTSL 2 BASIC5.17□□□□□ -1.58
CLCF1Q9UBD9 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC5.17□□□□□ -1.58
CLCF1Q9UBD9 AC007431.2-201ENST00000577189 563 ntTSL 2 BASIC5.17□□□□□ -1.58
CLCF1Q9UBD9 SNORD95-201ENST00000579879 68 ntBASIC5.17□□□□□ -1.58
CLCF1Q9UBD9 Z98949.1-204ENST00000595102 731 ntTSL 5 BASIC5.17□□□□□ -1.58
CLCF1Q9UBD9 AL352984.2-202ENST00000613699 155 ntBASIC5.17□□□□□ -1.58
CLCF1Q9UBD9 AC004477.3-201ENST00000614061 590 ntBASIC5.17□□□□□ -1.58
CLCF1Q9UBD9 MIR6886-201ENST00000619864 61 ntBASIC5.17□□□□□ -1.58
CLCF1Q9UBD9 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC5.17□□□□□ -1.58
CLCF1Q9UBD9 TTC37-201ENST00000358746 5706 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
CLCF1Q9UBD9 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC5.17□□□□□ -1.58
CLCF1Q9UBD9 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
CLCF1Q9UBD9 UGT2B15-201ENST00000338206 2077 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
CLCF1Q9UBD9 FBXL21-201ENST00000297158 1305 ntBASIC5.17□□□□□ -1.58
CLCF1Q9UBD9 AL591135.1-201ENST00000401578 5914 ntBASIC5.17□□□□□ -1.58
CLCF1Q9UBD9 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
CLCF1Q9UBD9 ENTPD1-AS1-212ENST00000458228 3274 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
CLCF1Q9UBD9 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
CLCF1Q9UBD9 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC5.17□□□□□ -1.58
CLCF1Q9UBD9 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC5.17□□□□□ -1.58
CLCF1Q9UBD9 RMDN2-201ENST00000234195 1985 ntTSL 2 BASIC5.16□□□□□ -1.58
CLCF1Q9UBD9 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 77.7 ms