Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 AL671309.1-201ENST00000603750 544 ntBASIC6.73□□□□□ -1.33
COL20A1Q9P218 FAM27E4-201ENST00000605259 342 ntBASIC6.73□□□□□ -1.33
COL20A1Q9P218 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC6.73□□□□□ -1.33
COL20A1Q9P218 ATM-229ENST00000639953 587 ntTSL 5 BASIC6.73□□□□□ -1.33
COL20A1Q9P218 TCF4-278ENST00000636400 8343 ntTSL 5 BASIC6.73□□□□□ -1.33
COL20A1Q9P218 TRIM6-205ENST00000445329 2951 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
COL20A1Q9P218 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC6.73□□□□□ -1.33
COL20A1Q9P218 AC098679.1-203ENST00000505532 2227 ntTSL 2 BASIC6.73□□□□□ -1.33
COL20A1Q9P218 PGM3-215ENST00000616566 5905 ntTSL 2 BASIC6.73□□□□□ -1.33
COL20A1Q9P218 RFX4-203ENST00000392842 3955 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
COL20A1Q9P218 QRSL1-202ENST00000369046 4106 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
COL20A1Q9P218 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
COL20A1Q9P218 OR2T29-202ENST00000641069 2637 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
COL20A1Q9P218 IL23R-201ENST00000347310 2912 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
COL20A1Q9P218 AC006600.2-201ENST00000624834 2506 ntBASIC6.72□□□□□ -1.33
COL20A1Q9P218 PDE1C-203ENST00000396184 8852 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
COL20A1Q9P218 CFAP221-203ENST00000413369 2801 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
COL20A1Q9P218 LCOR-201ENST00000286067 4542 ntBASIC6.72□□□□□ -1.33
COL20A1Q9P218 RNA5SP394-201ENST00000364216 119 ntBASIC6.72□□□□□ -1.33
COL20A1Q9P218 CCNB2P1-201ENST00000399411 1150 ntBASIC6.72□□□□□ -1.33
COL20A1Q9P218 HMGB1P20-201ENST00000402555 677 ntBASIC6.72□□□□□ -1.33
COL20A1Q9P218 RNA5SP178-201ENST00000410380 128 ntBASIC6.72□□□□□ -1.33
COL20A1Q9P218 AC098592.2-201ENST00000413158 265 ntBASIC6.72□□□□□ -1.33
COL20A1Q9P218 AL357078.2-201ENST00000416486 427 ntBASIC6.72□□□□□ -1.33
COL20A1Q9P218 HSFY7P-201ENST00000432672 318 ntBASIC6.72□□□□□ -1.33
COL20A1Q9P218 FAM53B-AS1-201ENST00000432699 558 ntTSL 2 BASIC6.72□□□□□ -1.33
COL20A1Q9P218 HSFY8P-201ENST00000437934 318 ntBASIC6.72□□□□□ -1.33
COL20A1Q9P218 SCAND3P1-201ENST00000439854 1060 ntBASIC6.72□□□□□ -1.33
COL20A1Q9P218 TXNP2-201ENST00000443918 295 ntBASIC6.72□□□□□ -1.33
COL20A1Q9P218 AC000124.1-201ENST00000448311 957 ntTSL 2 BASIC6.72□□□□□ -1.33
COL20A1Q9P218 MOB4-207ENST00000448447 1021 ntTSL 2 BASIC6.72□□□□□ -1.33
COL20A1Q9P218 AL139350.1-201ENST00000448825 408 ntTSL 3 BASIC6.72□□□□□ -1.33
COL20A1Q9P218 HSFY5P-201ENST00000453726 309 ntBASIC6.72□□□□□ -1.33
COL20A1Q9P218 AC246785.3-201ENST00000455105 314 ntTSL 5 BASIC6.72□□□□□ -1.33
COL20A1Q9P218 SNHG12-207ENST00000475441 444 ntTSL 3 BASIC6.72□□□□□ -1.33
COL20A1Q9P218 RN7SL717P-201ENST00000478343 297 ntBASIC6.72□□□□□ -1.33
COL20A1Q9P218 AC245041.2-201ENST00000479781 376 ntTSL 5 BASIC6.72□□□□□ -1.33
COL20A1Q9P218 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC6.72□□□□□ -1.33
COL20A1Q9P218 LINC01598-206ENST00000513381 499 ntTSL 4 BASIC6.72□□□□□ -1.33
COL20A1Q9P218 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC6.72□□□□□ -1.33
COL20A1Q9P218 LINC00500-201ENST00000515860 539 ntTSL 4 BASIC6.72□□□□□ -1.33
COL20A1Q9P218 KLRC1-204ENST00000536188 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC6.72□□□□□ -1.33
COL20A1Q9P218 AL355112.1-201ENST00000550309 1236 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
COL20A1Q9P218 DPPA3P2-201ENST00000553589 478 ntBASIC6.72□□□□□ -1.33
COL20A1Q9P218 AC136944.1-201ENST00000567464 560 ntTSL 5 BASIC6.72□□□□□ -1.33
COL20A1Q9P218 AC090651.1-201ENST00000567865 634 ntBASIC6.72□□□□□ -1.33
COL20A1Q9P218 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC6.72□□□□□ -1.33
COL20A1Q9P218 AP005230.1-203ENST00000582086 887 ntTSL 2 BASIC6.72□□□□□ -1.33
COL20A1Q9P218 MIR132-201ENST00000591554 101 ntBASIC6.72□□□□□ -1.33
COL20A1Q9P218 AC098617.1-205ENST00000595918 1032 ntTSL 5 BASIC6.72□□□□□ -1.33
COL20A1Q9P218 AC004890.3-201ENST00000605566 1095 ntBASIC6.72□□□□□ -1.33
COL20A1Q9P218 AC074276.2-201ENST00000619891 348 ntBASIC6.72□□□□□ -1.33
COL20A1Q9P218 SMARCA2-231ENST00000634931 939 ntTSL 5 BASIC6.72□□□□□ -1.33
COL20A1Q9P218 AL590396.2-201ENST00000636511 1041 ntBASIC6.72□□□□□ -1.33
COL20A1Q9P218 MIR193BHG-214ENST00000641765 509 ntBASIC6.72□□□□□ -1.33
COL20A1Q9P218 NAPEPLD-203ENST00000417955 4988 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
COL20A1Q9P218 CHD6-203ENST00000373233 10818 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
COL20A1Q9P218 BNC2-203ENST00000380672 12844 ntAPPRIS P2 TSL 2 BASIC6.72□□□□□ -1.33
COL20A1Q9P218 ZNF585A-201ENST00000292841 8618 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
COL20A1Q9P218 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC6.72□□□□□ -1.33
COL20A1Q9P218 NIN-217ENST00000530997 8368 ntAPPRIS P5 TSL 5 BASIC6.72□□□□□ -1.33
COL20A1Q9P218 AC097512.1-201ENST00000511453 1309 ntTSL 3 BASIC6.72□□□□□ -1.33
COL20A1Q9P218 AC093277.1-201ENST00000637776 1622 ntTSL 5 BASIC6.72□□□□□ -1.33
COL20A1Q9P218 KCNMA1-AS1-202ENST00000429850 3566 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
COL20A1Q9P218 CD96-201ENST00000283285 4324 ntAPPRIS P4 TSL 1 (best) BASIC6.72□□□□□ -1.33
COL20A1Q9P218 AC105105.2-201ENST00000590797 4521 ntTSL 2 BASIC6.71□□□□□ -1.33
COL20A1Q9P218 TEK-202ENST00000406359 3935 ntTSL 2 BASIC6.71□□□□□ -1.33
COL20A1Q9P218 NUP107-211ENST00000539906 3004 ntTSL 2 BASIC6.71□□□□□ -1.33
COL20A1Q9P218 JAKMIP2-205ENST00000507386 5915 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
COL20A1Q9P218 NBPF25P-202ENST00000619932 3827 ntTSL 2 BASIC6.71□□□□□ -1.33
COL20A1Q9P218 STON1-202ENST00000406226 5614 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
COL20A1Q9P218 FOXJ3-209ENST00000545068 5165 ntAPPRIS P3 TSL 5 BASIC6.71□□□□□ -1.34
COL20A1Q9P218 IQCJ-SCHIP1-205ENST00000527095 1410 ntAPPRIS ALT2 TSL 5 BASIC6.71□□□□□ -1.34
COL20A1Q9P218 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
COL20A1Q9P218 TLR10-201ENST00000308973 3958 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.34
COL20A1Q9P218 TAS2R16-201ENST00000249284 997 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
COL20A1Q9P218 DEFB118-201ENST00000253381 1158 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
COL20A1Q9P218 ITGB3BP-201ENST00000271002 948 ntAPPRIS P3 TSL 1 (best) BASIC6.71□□□□□ -1.34
COL20A1Q9P218 USMG5-201ENST00000309579 364 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
COL20A1Q9P218 SNORA64.1-201ENST00000362600 132 ntBASIC6.71□□□□□ -1.34
COL20A1Q9P218 AP003170.5-201ENST00000397185 335 ntBASIC6.71□□□□□ -1.34
COL20A1Q9P218 AC013410.2-201ENST00000422627 201 ntBASIC6.71□□□□□ -1.34
COL20A1Q9P218 C14orf105-202ENST00000422976 1153 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
COL20A1Q9P218 RPL34P27-201ENST00000428810 349 ntBASIC6.71□□□□□ -1.34
COL20A1Q9P218 AC023141.6-201ENST00000429418 337 ntBASIC6.71□□□□□ -1.34
COL20A1Q9P218 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC6.71□□□□□ -1.34
COL20A1Q9P218 AC003991.1-210ENST00000434733 1048 ntTSL 3 BASIC6.71□□□□□ -1.34
COL20A1Q9P218 AL162739.1-201ENST00000450606 307 ntBASIC6.71□□□□□ -1.34
COL20A1Q9P218 AP000547.1-201ENST00000454360 617 ntBASIC6.71□□□□□ -1.34
COL20A1Q9P218 AF015262.1-201ENST00000455028 698 ntTSL 3 BASIC6.71□□□□□ -1.34
COL20A1Q9P218 MTND2P30-201ENST00000456663 382 ntBASIC6.71□□□□□ -1.34
COL20A1Q9P218 RPS27AP2-201ENST00000457576 465 ntBASIC6.71□□□□□ -1.34
COL20A1Q9P218 SYPL1-205ENST00000470347 1193 ntTSL 3 BASIC6.71□□□□□ -1.34
COL20A1Q9P218 AC135999.1-201ENST00000478962 479 ntBASIC6.71□□□□□ -1.34
COL20A1Q9P218 AC093719.1-201ENST00000480427 441 ntBASIC6.71□□□□□ -1.34
COL20A1Q9P218 RPL38P3-201ENST00000484463 213 ntBASIC6.71□□□□□ -1.34
COL20A1Q9P218 AC104629.1-201ENST00000494226 508 ntBASIC6.71□□□□□ -1.34
COL20A1Q9P218 AC023818.1-201ENST00000498379 384 ntBASIC6.71□□□□□ -1.34
COL20A1Q9P218 AC094108.1-201ENST00000502494 527 ntTSL 3 BASIC6.71□□□□□ -1.34
COL20A1Q9P218 AC124854.1-201ENST00000512210 511 ntTSL 3 BASIC6.71□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 89.8 ms