Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 NFX1-203ENST00000379540 4604 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CHD8Q9HCK8 ST8SIA5-203ENST00000538168 13761 ntTSL 2 BASIC5.36□□□□□ -1.55
CHD8Q9HCK8 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC5.36□□□□□ -1.55
CHD8Q9HCK8 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
CHD8Q9HCK8 LINC01234-202ENST00000547963 2088 ntTSL 2 BASIC5.36□□□□□ -1.55
CHD8Q9HCK8 SNORD46.1-201ENST00000364139 104 ntBASIC5.36□□□□□ -1.55
CHD8Q9HCK8 PRB3-201ENST00000381842 1091 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
CHD8Q9HCK8 HIST1H3PS1-201ENST00000404612 417 ntBASIC5.36□□□□□ -1.55
CHD8Q9HCK8 AL445189.1-201ENST00000405722 338 ntBASIC5.36□□□□□ -1.55
CHD8Q9HCK8 AL023284.3-201ENST00000407767 334 ntBASIC5.36□□□□□ -1.55
CHD8Q9HCK8 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
CHD8Q9HCK8 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC5.36□□□□□ -1.55
CHD8Q9HCK8 Z95327.1-201ENST00000446082 482 ntBASIC5.36□□□□□ -1.55
CHD8Q9HCK8 EIF5AL1-201ENST00000520547 3840 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
CHD8Q9HCK8 AP001893.1-201ENST00000532866 362 ntTSL 5 BASIC5.36□□□□□ -1.55
CHD8Q9HCK8 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC5.36□□□□□ -1.55
CHD8Q9HCK8 AC006511.5-202ENST00000546339 1198 ntTSL 5 BASIC5.36□□□□□ -1.55
CHD8Q9HCK8 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CHD8Q9HCK8 AL132640.3-201ENST00000630473 177 ntBASIC5.36□□□□□ -1.55
CHD8Q9HCK8 GUCY1B2-204ENST00000531898 1979 ntBASIC5.36□□□□□ -1.55
CHD8Q9HCK8 C9-201ENST00000263408 2713 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CHD8Q9HCK8 VTCN1-207ENST00000539893 2719 ntTSL 2 BASIC5.36□□□□□ -1.55
CHD8Q9HCK8 ITSN2-213ENST00000622089 5805 ntTSL 5 BASIC5.36□□□□□ -1.55
CHD8Q9HCK8 KAT6A-202ENST00000396930 9285 ntAPPRIS P3 TSL 5 BASIC5.35□□□□□ -1.55
CHD8Q9HCK8 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
CHD8Q9HCK8 MRPS27-202ENST00000457646 2628 ntTSL 2 BASIC5.35□□□□□ -1.55
CHD8Q9HCK8 AC007938.2-201ENST00000604666 2634 ntBASIC5.35□□□□□ -1.55
CHD8Q9HCK8 AL136317.2-201ENST00000619851 2254 ntTSL 2 BASIC5.35□□□□□ -1.55
CHD8Q9HCK8 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC5.35□□□□□ -1.55
CHD8Q9HCK8 RNA5SP478-201ENST00000364657 115 ntBASIC5.35□□□□□ -1.55
CHD8Q9HCK8 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC5.35□□□□□ -1.55
CHD8Q9HCK8 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC5.35□□□□□ -1.55
CHD8Q9HCK8 RPL7P11-201ENST00000437586 658 ntBASIC5.35□□□□□ -1.55
CHD8Q9HCK8 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC5.35□□□□□ -1.55
CHD8Q9HCK8 FRG2FP-204ENST00000453982 852 ntBASIC5.35□□□□□ -1.55
CHD8Q9HCK8 AC104164.1-201ENST00000460282 590 ntBASIC5.35□□□□□ -1.55
CHD8Q9HCK8 RPL23AP72-201ENST00000492447 435 ntBASIC5.35□□□□□ -1.55
CHD8Q9HCK8 BMPR1APS2-201ENST00000527904 1012 ntBASIC5.35□□□□□ -1.55
CHD8Q9HCK8 BLZF2P-201ENST00000553776 1130 ntBASIC5.35□□□□□ -1.55
CHD8Q9HCK8 AC233699.1-201ENST00000569955 1168 ntBASIC5.35□□□□□ -1.55
CHD8Q9HCK8 LAPTM4BP2-201ENST00000604542 446 ntBASIC5.35□□□□□ -1.55
CHD8Q9HCK8 AC008280.3-201ENST00000606436 732 ntTSL 5 BASIC5.35□□□□□ -1.55
CHD8Q9HCK8 MEF2C-209ENST00000504921 7561 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
CHD8Q9HCK8 PDE4DIP-206ENST00000369356 8307 ntAPPRIS P4 TSL 1 (best) BASIC5.35□□□□□ -1.55
CHD8Q9HCK8 PTPRB-201ENST00000261266 6110 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
CHD8Q9HCK8 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC5.35□□□□□ -1.55
CHD8Q9HCK8 LINC00326-202ENST00000457339 2515 ntTSL 5 BASIC5.35□□□□□ -1.55
CHD8Q9HCK8 CTNND1-202ENST00000361332 6295 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
CHD8Q9HCK8 BRCA1-201ENST00000352993 3668 ntTSL 5 BASIC5.35□□□□□ -1.55
CHD8Q9HCK8 DNAJC6-203ENST00000395325 5743 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
CHD8Q9HCK8 CCNE2-202ENST00000396133 1361 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
CHD8Q9HCK8 A2M-201ENST00000318602 4844 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
CHD8Q9HCK8 ZNF493-201ENST00000339914 1665 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
CHD8Q9HCK8 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
CHD8Q9HCK8 AC233289.1-201ENST00000403700 508 ntBASIC5.35□□□□□ -1.55
CHD8Q9HCK8 AL138831.1-201ENST00000415144 209 ntTSL 3 BASIC5.35□□□□□ -1.55
CHD8Q9HCK8 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
CHD8Q9HCK8 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC5.35□□□□□ -1.55
CHD8Q9HCK8 AC012616.1-201ENST00000600294 197 ntBASIC5.35□□□□□ -1.55
CHD8Q9HCK8 FP236241.1-206ENST00000625005 987 ntTSL 5 BASIC5.35□□□□□ -1.55
CHD8Q9HCK8 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC5.35□□□□□ -1.55
CHD8Q9HCK8 SMAD5-211ENST00000545279 7012 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
CHD8Q9HCK8 OFD1P17-201ENST00000437639 3018 ntBASIC5.35□□□□□ -1.55
CHD8Q9HCK8 OR7D2-203ENST00000642043 3157 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
CHD8Q9HCK8 AC022819.1-201ENST00000563495 3910 ntBASIC5.35□□□□□ -1.55
CHD8Q9HCK8 SPHKAP-202ENST00000392056 6917 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
CHD8Q9HCK8 AC087258.1-203ENST00000545400 1629 ntTSL 2 BASIC5.35□□□□□ -1.55
CHD8Q9HCK8 AC011493.1-201ENST00000596753 1632 ntBASIC5.35□□□□□ -1.55
CHD8Q9HCK8 AL035555.1-201ENST00000404462 1790 ntBASIC5.35□□□□□ -1.55
CHD8Q9HCK8 FUT10-206ENST00000518672 3115 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
CHD8Q9HCK8 SPATS2L-227ENST00000619961 6115 ntTSL 2 BASIC5.35□□□□□ -1.55
CHD8Q9HCK8 LINC01415-201ENST00000587320 4071 ntTSL 2 BASIC5.34□□□□□ -1.55
CHD8Q9HCK8 AL031123.3-201ENST00000623345 1837 ntBASIC5.34□□□□□ -1.55
CHD8Q9HCK8 APOL6-201ENST00000409652 10121 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
CHD8Q9HCK8 GABRQ-201ENST00000598523 6172 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
CHD8Q9HCK8 ZNF112-201ENST00000337401 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
CHD8Q9HCK8 AP004243.1-201ENST00000529108 1433 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
CHD8Q9HCK8 COL24A1-201ENST00000370571 6825 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
CHD8Q9HCK8 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC5.34□□□□□ -1.55
CHD8Q9HCK8 AL590723.1-201ENST00000426030 629 ntTSL 5 BASIC5.34□□□□□ -1.55
CHD8Q9HCK8 FAM96AP1-201ENST00000430879 482 ntBASIC5.34□□□□□ -1.55
CHD8Q9HCK8 CCNB1IP1P2-201ENST00000432876 818 ntBASIC5.34□□□□□ -1.55
CHD8Q9HCK8 AL049649.1-201ENST00000444792 1105 ntTSL 5 BASIC5.34□□□□□ -1.55
CHD8Q9HCK8 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC5.34□□□□□ -1.55
CHD8Q9HCK8 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC5.34□□□□□ -1.55
CHD8Q9HCK8 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC5.34□□□□□ -1.55
CHD8Q9HCK8 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC5.34□□□□□ -1.55
CHD8Q9HCK8 AC009117.1-201ENST00000563948 554 ntBASIC5.34□□□□□ -1.55
CHD8Q9HCK8 MIR3189-201ENST00000578735 73 ntBASIC5.34□□□□□ -1.55
CHD8Q9HCK8 WWOX-217ENST00000620008 450 ntTSL 2 BASIC5.34□□□□□ -1.55
CHD8Q9HCK8 AL136985.3-202ENST00000636386 2708 ntTSL 5 BASIC5.34□□□□□ -1.55
CHD8Q9HCK8 PSMB2-202ENST00000621781 4217 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
CHD8Q9HCK8 TSC1-203ENST00000440111 8463 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
CHD8Q9HCK8 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.55
CHD8Q9HCK8 MRE11-204ENST00000407439 2684 ntTSL 2 BASIC5.34□□□□□ -1.55
CHD8Q9HCK8 FGF10-201ENST00000264664 2193 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
CHD8Q9HCK8 OPALIN-203ENST00000393871 3545 ntTSL 2 BASIC5.34□□□□□ -1.55
CHD8Q9HCK8 TXNRD1-205ENST00000503506 3930 ntAPPRIS P2 TSL 1 (best) BASIC5.34□□□□□ -1.55
CHD8Q9HCK8 CD46-209ENST00000367047 3089 ntTSL 5 BASIC5.34□□□□□ -1.55
CHD8Q9HCK8 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 94.7 ms