Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 AC090616.1-201ENST00000583895 447 ntBASIC5.86□□□□□ -1.47
SSBP3Q9BWW4 ZNF235-204ENST00000589799 955 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
SSBP3Q9BWW4 AC008736.1-201ENST00000592431 568 ntTSL 2 BASIC5.86□□□□□ -1.47
SSBP3Q9BWW4 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC5.86□□□□□ -1.47
SSBP3Q9BWW4 AC012065.3-201ENST00000602736 439 ntBASIC5.86□□□□□ -1.47
SSBP3Q9BWW4 CLPTM1LP1-201ENST00000604519 484 ntBASIC5.86□□□□□ -1.47
SSBP3Q9BWW4 AC022001.1-201ENST00000605193 268 ntBASIC5.86□□□□□ -1.47
SSBP3Q9BWW4 AP003117.2-201ENST00000606010 545 ntBASIC5.86□□□□□ -1.47
SSBP3Q9BWW4 AC007038.2-201ENST00000608095 740 ntBASIC5.86□□□□□ -1.47
SSBP3Q9BWW4 LINC00635-219ENST00000608506 482 ntTSL 5 BASIC5.86□□□□□ -1.47
SSBP3Q9BWW4 TP53TG1_2.1-201ENST00000611226 182 ntBASIC5.86□□□□□ -1.47
SSBP3Q9BWW4 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC5.86□□□□□ -1.47
SSBP3Q9BWW4 AC008626.2-201ENST00000624425 248 ntBASIC5.86□□□□□ -1.47
SSBP3Q9BWW4 LINC00466-206ENST00000634576 1279 ntTSL 5 BASIC5.86□□□□□ -1.47
SSBP3Q9BWW4 CCDC125-203ENST00000396499 3615 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
SSBP3Q9BWW4 ZNF333-203ENST00000540689 3595 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
SSBP3Q9BWW4 DOCK4-216ENST00000494651 3282 ntTSL 5 BASIC5.86□□□□□ -1.47
SSBP3Q9BWW4 KLRD1-203ENST00000350274 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
SSBP3Q9BWW4 IL2RA-203ENST00000379959 3176 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
SSBP3Q9BWW4 ZG16-201ENST00000400752 3132 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
SSBP3Q9BWW4 SORBS1-203ENST00000354106 3015 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
SSBP3Q9BWW4 WDR89-202ENST00000394942 2993 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
SSBP3Q9BWW4 KPNB1-203ENST00000540627 2989 ntTSL 2 BASIC5.86□□□□□ -1.47
SSBP3Q9BWW4 PPFIA2-205ENST00000541570 2976 ntTSL 2 BASIC5.86□□□□□ -1.47
SSBP3Q9BWW4 ZMYM2-210ENST00000610343 10200 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
SSBP3Q9BWW4 AL359263.1-201ENST00000441188 2796 ntBASIC5.86□□□□□ -1.47
SSBP3Q9BWW4 ABLIM1-202ENST00000369252 7690 ntTSL 5 BASIC5.86□□□□□ -1.47
SSBP3Q9BWW4 TMC5-206ENST00000561503 2487 ntTSL 2 BASIC5.86□□□□□ -1.47
SSBP3Q9BWW4 PRRC2C-202ENST00000367742 10366 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
SSBP3Q9BWW4 MARK2P4-201ENST00000503381 2380 ntBASIC5.86□□□□□ -1.47
SSBP3Q9BWW4 RAPGEF4-214ENST00000538974 3920 ntTSL 2 BASIC5.86□□□□□ -1.47
SSBP3Q9BWW4 CFAP65-201ENST00000295729 2259 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
SSBP3Q9BWW4 AP4E1-203ENST00000560508 6653 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
SSBP3Q9BWW4 LRFN5-203ENST00000554120 2121 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
SSBP3Q9BWW4 ARNT-201ENST00000354396 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
SSBP3Q9BWW4 ZNF3-203ENST00000303915 3473 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
SSBP3Q9BWW4 AL355306.2-206ENST00000635233 1903 ntTSL 5 BASIC5.86□□□□□ -1.47
SSBP3Q9BWW4 PHACTR2-201ENST00000305766 1851 ntAPPRIS P3 TSL 2 BASIC5.85□□□□□ -1.47
SSBP3Q9BWW4 OR2L13-203ENST00000641893 1817 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
SSBP3Q9BWW4 CCR6-202ENST00000349984 2980 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
SSBP3Q9BWW4 PKIA-201ENST00000352966 1736 ntAPPRIS P1 TSL 2 BASIC5.85□□□□□ -1.47
SSBP3Q9BWW4 ESRRG-201ENST00000359162 5197 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
SSBP3Q9BWW4 GOSR2-221ENST00000638892 3808 ntTSL 5 BASIC5.85□□□□□ -1.47
SSBP3Q9BWW4 AC061975.7-201ENST00000592016 2692 ntBASIC5.85□□□□□ -1.47
SSBP3Q9BWW4 CLCN3-211ENST00000613795 5874 ntTSL 5 BASIC5.85□□□□□ -1.47
SSBP3Q9BWW4 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC5.85□□□□□ -1.47
SSBP3Q9BWW4 EZH1-202ENST00000428826 4623 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
SSBP3Q9BWW4 EHBP1-203ENST00000405289 3591 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
SSBP3Q9BWW4 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
SSBP3Q9BWW4 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC5.85□□□□□ -1.47
SSBP3Q9BWW4 CASC15-201ENST00000444265 1497 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
SSBP3Q9BWW4 LINC00293-204ENST00000521715 1498 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
SSBP3Q9BWW4 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
SSBP3Q9BWW4 CEACAM1-213ENST00000599389 1342 ntTSL 5 BASIC5.85□□□□□ -1.47
SSBP3Q9BWW4 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC5.85□□□□□ -1.47
SSBP3Q9BWW4 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
SSBP3Q9BWW4 SNORD116.1-201ENST00000365628 92 ntBASIC5.85□□□□□ -1.47
SSBP3Q9BWW4 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
SSBP3Q9BWW4 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC5.85□□□□□ -1.47
SSBP3Q9BWW4 MT-TH-201ENST00000387441 69 ntBASIC5.85□□□□□ -1.47
SSBP3Q9BWW4 TRAV27-201ENST00000390457 425 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
SSBP3Q9BWW4 ATF1P1-201ENST00000406040 927 ntBASIC5.85□□□□□ -1.47
SSBP3Q9BWW4 AL136100.1-201ENST00000407696 330 ntBASIC5.85□□□□□ -1.47
SSBP3Q9BWW4 SLC3A1-203ENST00000409294 792 ntTSL 2 BASIC5.85□□□□□ -1.47
SSBP3Q9BWW4 NUCB1-AS1-201ENST00000416432 433 ntTSL 2 BASIC5.85□□□□□ -1.47
SSBP3Q9BWW4 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC5.85□□□□□ -1.47
SSBP3Q9BWW4 NFIA-AS2-202ENST00000421455 768 ntTSL 4 BASIC5.85□□□□□ -1.47
SSBP3Q9BWW4 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC5.85□□□□□ -1.47
SSBP3Q9BWW4 CNOT7P2-201ENST00000441051 832 ntBASIC5.85□□□□□ -1.47
SSBP3Q9BWW4 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
SSBP3Q9BWW4 AC004593.1-201ENST00000446246 798 ntTSL 3 BASIC5.85□□□□□ -1.47
SSBP3Q9BWW4 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC5.85□□□□□ -1.47
SSBP3Q9BWW4 AC002486.2-201ENST00000447806 590 ntBASIC5.85□□□□□ -1.47
SSBP3Q9BWW4 LRRC69-202ENST00000448384 1044 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
SSBP3Q9BWW4 AURKAPS1-201ENST00000451805 1212 ntBASIC5.85□□□□□ -1.47
SSBP3Q9BWW4 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC5.85□□□□□ -1.47
SSBP3Q9BWW4 CFTRP1-201ENST00000456646 183 ntBASIC5.85□□□□□ -1.47
SSBP3Q9BWW4 RN7SL492P-201ENST00000460700 295 ntBASIC5.85□□□□□ -1.47
SSBP3Q9BWW4 MTCO3P38-201ENST00000468910 766 ntBASIC5.85□□□□□ -1.47
SSBP3Q9BWW4 AC126182.1-201ENST00000478134 357 ntBASIC5.85□□□□□ -1.47
SSBP3Q9BWW4 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC5.85□□□□□ -1.47
SSBP3Q9BWW4 AC109458.1-201ENST00000508858 316 ntBASIC5.85□□□□□ -1.47
SSBP3Q9BWW4 LINC01365-202ENST00000512219 637 ntTSL 5 BASIC5.85□□□□□ -1.47
SSBP3Q9BWW4 RNA5SP303-201ENST00000516192 130 ntBASIC5.85□□□□□ -1.47
SSBP3Q9BWW4 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC5.85□□□□□ -1.47
SSBP3Q9BWW4 KCNU1-202ENST00000518904 334 ntTSL 2 BASIC5.85□□□□□ -1.47
SSBP3Q9BWW4 CARSP2-201ENST00000520688 277 ntBASIC5.85□□□□□ -1.47
SSBP3Q9BWW4 LINC02055-205ENST00000521090 774 ntTSL 3 BASIC5.85□□□□□ -1.47
SSBP3Q9BWW4 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC5.85□□□□□ -1.47
SSBP3Q9BWW4 HIGD1AP10-201ENST00000527837 282 ntBASIC5.85□□□□□ -1.47
SSBP3Q9BWW4 OR4A1P-201ENST00000532342 920 ntBASIC5.85□□□□□ -1.47
SSBP3Q9BWW4 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC5.85□□□□□ -1.47
SSBP3Q9BWW4 AC016957.1-201ENST00000534895 309 ntBASIC5.85□□□□□ -1.47
SSBP3Q9BWW4 NPIPB9-202ENST00000550983 2123 ntAPPRIS P2 TSL 1 (best) BASIC5.85□□□□□ -1.47
SSBP3Q9BWW4 AC089984.3-201ENST00000552838 363 ntBASIC5.85□□□□□ -1.47
SSBP3Q9BWW4 AL135978.1-201ENST00000553618 1266 ntBASIC5.85□□□□□ -1.47
SSBP3Q9BWW4 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC5.85□□□□□ -1.47
SSBP3Q9BWW4 RPS3AP4-201ENST00000555161 764 ntBASIC5.85□□□□□ -1.47
SSBP3Q9BWW4 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC5.85□□□□□ -1.47
SSBP3Q9BWW4 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC5.85□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 102.3 ms