Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC5.81□□□□□ -1.48
SNX18Q96RF0 RN7SKP253-201ENST00000516424 309 ntBASIC5.81□□□□□ -1.48
SNX18Q96RF0 RN7SKP265-201ENST00000516448 223 ntBASIC5.81□□□□□ -1.48
SNX18Q96RF0 AC110011.1-201ENST00000518260 582 ntTSL 3 BASIC5.81□□□□□ -1.48
SNX18Q96RF0 FBXO16-207ENST00000518734 995 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
SNX18Q96RF0 H2AFV-208ENST00000521529 439 ntTSL 5 BASIC5.81□□□□□ -1.48
SNX18Q96RF0 TBCA-209ENST00000522370 435 ntTSL 3 BASIC5.81□□□□□ -1.48
SNX18Q96RF0 LINC00534-203ENST00000523406 812 ntTSL 3 BASIC5.81□□□□□ -1.48
SNX18Q96RF0 PATE4-203ENST00000534411 897 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
SNX18Q96RF0 AC025419.1-204ENST00000539653 745 ntTSL 3 BASIC5.81□□□□□ -1.48
SNX18Q96RF0 AC073864.1-201ENST00000540161 562 ntTSL 4 BASIC5.81□□□□□ -1.48
SNX18Q96RF0 AP002518.2-201ENST00000544925 393 ntTSL 5 BASIC5.81□□□□□ -1.48
SNX18Q96RF0 UBE2N-204ENST00000549833 960 ntTSL 3 BASIC5.81□□□□□ -1.48
SNX18Q96RF0 OR4C49P-201ENST00000563891 900 ntBASIC5.81□□□□□ -1.48
SNX18Q96RF0 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
SNX18Q96RF0 AL390718.1-201ENST00000566904 506 ntTSL 3 BASIC5.81□□□□□ -1.48
SNX18Q96RF0 AC126323.5-201ENST00000569913 592 ntTSL 3 BASIC5.81□□□□□ -1.48
SNX18Q96RF0 AC090666.1-201ENST00000578241 445 ntBASIC5.81□□□□□ -1.48
SNX18Q96RF0 MTCO2P2-201ENST00000591258 225 ntBASIC5.81□□□□□ -1.48
SNX18Q96RF0 RPS11-205ENST00000599561 430 ntTSL 5 BASIC5.81□□□□□ -1.48
SNX18Q96RF0 AC025857.2-201ENST00000602711 238 ntBASIC5.81□□□□□ -1.48
SNX18Q96RF0 AC073333.2-201ENST00000603589 769 ntBASIC5.81□□□□□ -1.48
SNX18Q96RF0 AC069431.2-201ENST00000604149 1099 ntBASIC5.81□□□□□ -1.48
SNX18Q96RF0 AC098935.2-201ENST00000604222 466 ntBASIC5.81□□□□□ -1.48
SNX18Q96RF0 AC024589.2-201ENST00000605642 1294 ntBASIC5.81□□□□□ -1.48
SNX18Q96RF0 OR10X1-201ENST00000623167 981 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
SNX18Q96RF0 OR51B2-201ENST00000624187 939 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
SNX18Q96RF0 CHRM3-AS2-209ENST00000628573 766 ntTSL 5 BASIC5.81□□□□□ -1.48
SNX18Q96RF0 SOX9-AS1-218ENST00000628742 733 ntTSL 5 BASIC5.81□□□□□ -1.48
SNX18Q96RF0 UBA3-213ENST00000631029 123 ntTSL 5 BASIC5.81□□□□□ -1.48
SNX18Q96RF0 FYB2-201ENST00000343433 3135 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
SNX18Q96RF0 CAMSAP2-201ENST00000236925 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
SNX18Q96RF0 HORMAD2-202ENST00000403975 2115 ntAPPRIS P1 TSL 2 BASIC5.81□□□□□ -1.48
SNX18Q96RF0 TBC1D23-202ENST00000394144 3677 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
SNX18Q96RF0 MAP3K20-AS1-203ENST00000423106 2538 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
SNX18Q96RF0 SLCO1C1-207ENST00000540354 2529 ntTSL 2 BASIC5.81□□□□□ -1.48
SNX18Q96RF0 AC012668.3-202ENST00000417485 1642 ntTSL 5 BASIC5.81□□□□□ -1.48
SNX18Q96RF0 AL359313.1-201ENST00000447311 2293 ntTSL 2 BASIC5.81□□□□□ -1.48
SNX18Q96RF0 C8orf34-AS1-201ENST00000512294 1600 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
SNX18Q96RF0 CHD6-202ENST00000373222 2477 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
SNX18Q96RF0 OR14A16-202ENST00000641093 1367 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
SNX18Q96RF0 CD84-208ENST00000534968 7885 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
SNX18Q96RF0 RALGAPA2-201ENST00000202677 6152 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
SNX18Q96RF0 BABAM2-206ENST00000379632 1752 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
SNX18Q96RF0 PLEKHA5-216ENST00000540972 1954 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
SNX18Q96RF0 CNTRL-204ENST00000373847 3372 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
SNX18Q96RF0 PCYT1A-204ENST00000419333 1325 ntTSL 5 BASIC5.8□□□□□ -1.48
SNX18Q96RF0 IL23R-201ENST00000347310 2912 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
SNX18Q96RF0 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
SNX18Q96RF0 IFNE-201ENST00000448696 1475 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
SNX18Q96RF0 WFDC11-201ENST00000324384 614 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
SNX18Q96RF0 SPINK14-201ENST00000356972 294 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
SNX18Q96RF0 ZNF66-202ENST00000360204 1120 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
SNX18Q96RF0 MRPS6P2-201ENST00000381143 370 ntBASIC5.8□□□□□ -1.48
SNX18Q96RF0 ANAPC10P1-201ENST00000395991 556 ntBASIC5.8□□□□□ -1.48
SNX18Q96RF0 GNAT3-201ENST00000398291 1159 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
SNX18Q96RF0 VN1R51P-201ENST00000411675 945 ntBASIC5.8□□□□□ -1.48
SNX18Q96RF0 NR1I3-208ENST00000412844 989 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
SNX18Q96RF0 LINC01058-201ENST00000420694 448 ntTSL 5 BASIC5.8□□□□□ -1.48
SNX18Q96RF0 AL139184.1-202ENST00000422303 222 ntBASIC5.8□□□□□ -1.48
SNX18Q96RF0 GAPDHP34-201ENST00000432112 823 ntBASIC5.8□□□□□ -1.48
SNX18Q96RF0 ATP6V1G1P4-201ENST00000438388 335 ntBASIC5.8□□□□□ -1.48
SNX18Q96RF0 E2F6P3-201ENST00000441743 743 ntBASIC5.8□□□□□ -1.48
SNX18Q96RF0 AC069277.2-201ENST00000454211 432 ntBASIC5.8□□□□□ -1.48
SNX18Q96RF0 SYPL1-205ENST00000470347 1193 ntTSL 3 BASIC5.8□□□□□ -1.48
SNX18Q96RF0 AP003385.3-201ENST00000472498 287 ntBASIC5.8□□□□□ -1.48
SNX18Q96RF0 LARP7P4-201ENST00000481075 878 ntBASIC5.8□□□□□ -1.48
SNX18Q96RF0 NPM1P27-201ENST00000502784 830 ntBASIC5.8□□□□□ -1.48
SNX18Q96RF0 HMGB1P3-201ENST00000502802 616 ntBASIC5.8□□□□□ -1.48
SNX18Q96RF0 EDNRA-204ENST00000506066 1032 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
SNX18Q96RF0 USP17L23-201ENST00000506619 551 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
SNX18Q96RF0 NR1I3-229ENST00000511748 480 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
SNX18Q96RF0 AC010634.1-201ENST00000513925 540 ntTSL 3 BASIC5.8□□□□□ -1.48
SNX18Q96RF0 AC097501.1-202ENST00000514707 313 ntTSL 3 BASIC5.8□□□□□ -1.48
SNX18Q96RF0 IGKV1D-22-201ENST00000518953 324 ntBASIC5.8□□□□□ -1.48
SNX18Q96RF0 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC5.8□□□□□ -1.48
SNX18Q96RF0 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC5.8□□□□□ -1.48
SNX18Q96RF0 C1GALT1P1-201ENST00000548895 1089 ntBASIC5.8□□□□□ -1.48
SNX18Q96RF0 LINC02412-201ENST00000552584 1269 ntTSL 5 BASIC5.8□□□□□ -1.48
SNX18Q96RF0 GNG2-203ENST00000553432 577 ntTSL 4 BASIC5.8□□□□□ -1.48
SNX18Q96RF0 C14orf2-211ENST00000557040 472 ntAPPRIS P1 TSL 3 BASIC5.8□□□□□ -1.48
SNX18Q96RF0 AC010809.1-201ENST00000560268 562 ntTSL 3 BASIC5.8□□□□□ -1.48
SNX18Q96RF0 AC006504.5-201ENST00000588122 655 ntTSL 5 BASIC5.8□□□□□ -1.48
SNX18Q96RF0 QTRT1P1-201ENST00000604344 1078 ntBASIC5.8□□□□□ -1.48
SNX18Q96RF0 PCGEM1-202ENST00000606314 759 ntTSL 5 BASIC5.8□□□□□ -1.48
SNX18Q96RF0 AC012213.4-201ENST00000606457 354 ntBASIC5.8□□□□□ -1.48
SNX18Q96RF0 BACH1-IT2-202ENST00000608072 691 ntTSL 5 BASIC5.8□□□□□ -1.48
SNX18Q96RF0 AL513478.2-201ENST00000610400 988 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
SNX18Q96RF0 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC5.8□□□□□ -1.48
SNX18Q96RF0 AC009464.1-201ENST00000615731 469 ntBASIC5.8□□□□□ -1.48
SNX18Q96RF0 MIR6503-201ENST00000622884 86 ntBASIC5.8□□□□□ -1.48
SNX18Q96RF0 SNHG5-221ENST00000624295 632 ntTSL 5 BASIC5.8□□□□□ -1.48
SNX18Q96RF0 VIPR1-AS1-221ENST00000626992 602 ntTSL 5 BASIC5.8□□□□□ -1.48
SNX18Q96RF0 TTN-AS1-268ENST00000629094 604 ntTSL 5 BASIC5.8□□□□□ -1.48
SNX18Q96RF0 AC027559.1-201ENST00000636288 271 ntBASIC5.8□□□□□ -1.48
SNX18Q96RF0 DNAH3-201ENST00000261383 12394 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
SNX18Q96RF0 AC125336.1-201ENST00000508893 2827 ntBASIC5.8□□□□□ -1.48
SNX18Q96RF0 KIAA0895-201ENST00000297063 4153 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
SNX18Q96RF0 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC5.8□□□□□ -1.48
SNX18Q96RF0 ASXL2-203ENST00000435504 12878 ntAPPRIS P5 TSL 5 BASIC5.8□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 76.9 ms