Protein–RNA interactions for Protein: Q96GC9

VMP1, Vacuole membrane protein 1, humanhuman

Predictions only

Length 406 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1Q96GC9 AC087501.1-201ENST00000445617 715 ntTSL 5 BASIC5.9□□□□□ -1.46
VMP1Q96GC9 AL589765.3-201ENST00000446084 462 ntBASIC5.9□□□□□ -1.46
VMP1Q96GC9 AL591363.1-201ENST00000450091 483 ntBASIC5.9□□□□□ -1.46
VMP1Q96GC9 AC011625.1-201ENST00000455442 526 ntTSL 4 BASIC5.9□□□□□ -1.46
VMP1Q96GC9 AL133244.1-201ENST00000456007 258 ntBASIC5.9□□□□□ -1.46
VMP1Q96GC9 Z83838.1-202ENST00000456225 839 ntBASIC5.9□□□□□ -1.46
VMP1Q96GC9 AL031275.1-201ENST00000457405 418 ntTSL 3 BASIC5.9□□□□□ -1.46
VMP1Q96GC9 SNX18P26-201ENST00000458433 740 ntBASIC5.9□□□□□ -1.46
VMP1Q96GC9 RN7SL168P-201ENST00000463821 279 ntBASIC5.9□□□□□ -1.46
VMP1Q96GC9 RPL12P31-201ENST00000478433 450 ntBASIC5.9□□□□□ -1.46
VMP1Q96GC9 LINC01192-206ENST00000489012 818 ntTSL 5 BASIC5.9□□□□□ -1.46
VMP1Q96GC9 AC010343.2-201ENST00000510162 224 ntBASIC5.9□□□□□ -1.46
VMP1Q96GC9 AC108103.1-201ENST00000511286 446 ntBASIC5.9□□□□□ -1.46
VMP1Q96GC9 AC010425.1-201ENST00000511734 554 ntTSL 4 BASIC5.9□□□□□ -1.46
VMP1Q96GC9 AC117525.1-201ENST00000515228 503 ntBASIC5.9□□□□□ -1.46
VMP1Q96GC9 AC097486.1-201ENST00000515331 210 ntBASIC5.9□□□□□ -1.46
VMP1Q96GC9 AC018607.1-201ENST00000518552 673 ntTSL 5 BASIC5.9□□□□□ -1.46
VMP1Q96GC9 AC084125.1-201ENST00000525461 429 ntTSL 3 BASIC5.9□□□□□ -1.46
VMP1Q96GC9 CTNNA3-205ENST00000545309 555 ntTSL 5 BASIC5.9□□□□□ -1.46
VMP1Q96GC9 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.46
VMP1Q96GC9 AC092652.2-201ENST00000552220 622 ntTSL 4 BASIC5.9□□□□□ -1.46
VMP1Q96GC9 AC107958.1-201ENST00000556576 290 ntBASIC5.9□□□□□ -1.46
VMP1Q96GC9 AC137800.1-201ENST00000562976 573 ntTSL 4 BASIC5.9□□□□□ -1.46
VMP1Q96GC9 CD24P2-201ENST00000565486 219 ntBASIC5.9□□□□□ -1.46
VMP1Q96GC9 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
VMP1Q96GC9 AC005544.1-201ENST00000584277 460 ntTSL 3 BASIC5.9□□□□□ -1.46
VMP1Q96GC9 AP000919.2-202ENST00000584431 673 ntTSL 3 BASIC5.9□□□□□ -1.46
VMP1Q96GC9 AC005332.4-201ENST00000592752 579 ntBASIC5.9□□□□□ -1.46
VMP1Q96GC9 ZNF814-214ENST00000600634 461 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
VMP1Q96GC9 AL589935.1-201ENST00000602418 488 ntTSL 4 BASIC5.9□□□□□ -1.46
VMP1Q96GC9 AP000654.1-201ENST00000602510 1192 ntTSL 5 BASIC5.9□□□□□ -1.46
VMP1Q96GC9 SMIM12P1-201ENST00000603004 274 ntBASIC5.9□□□□□ -1.46
VMP1Q96GC9 IGLVIVOR22-1-201ENST00000603243 397 ntBASIC5.9□□□□□ -1.46
VMP1Q96GC9 uc_338.31-201ENST00000615595 186 ntBASIC5.9□□□□□ -1.46
VMP1Q96GC9 RMST_5.1-201ENST00000618704 126 ntBASIC5.9□□□□□ -1.46
VMP1Q96GC9 MIR7159-201ENST00000620587 66 ntBASIC5.9□□□□□ -1.46
VMP1Q96GC9 AC111152.1-202ENST00000635848 339 ntBASIC5.9□□□□□ -1.46
VMP1Q96GC9 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC5.9□□□□□ -1.47
VMP1Q96GC9 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC5.9□□□□□ -1.47
VMP1Q96GC9 OSBPL9-206ENST00000453295 2842 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
VMP1Q96GC9 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC5.9□□□□□ -1.47
VMP1Q96GC9 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
VMP1Q96GC9 CXCL8-201ENST00000307407 1705 ntAPPRIS P2 TSL 1 (best) BASIC5.9□□□□□ -1.47
VMP1Q96GC9 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC5.9□□□□□ -1.47
VMP1Q96GC9 CAMSAP2-201ENST00000236925 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.47
VMP1Q96GC9 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
VMP1Q96GC9 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC5.9□□□□□ -1.47
VMP1Q96GC9 OFD1P15Y-201ENST00000411536 1392 ntBASIC5.9□□□□□ -1.47
VMP1Q96GC9 ARHGAP15-201ENST00000295095 1775 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
VMP1Q96GC9 GNRHR-201ENST00000226413 2164 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
VMP1Q96GC9 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC5.9□□□□□ -1.47
VMP1Q96GC9 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
VMP1Q96GC9 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC5.9□□□□□ -1.47
VMP1Q96GC9 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.47
VMP1Q96GC9 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
VMP1Q96GC9 TLR6-201ENST00000381950 2938 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
VMP1Q96GC9 ZNF578-201ENST00000421239 2017 ntAPPRIS P1 TSL 2 BASIC5.89□□□□□ -1.47
VMP1Q96GC9 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC5.89□□□□□ -1.47
VMP1Q96GC9 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
VMP1Q96GC9 HORMAD2-202ENST00000403975 2115 ntAPPRIS P1 TSL 2 BASIC5.89□□□□□ -1.47
VMP1Q96GC9 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC5.89□□□□□ -1.47
VMP1Q96GC9 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC5.89□□□□□ -1.47
VMP1Q96GC9 SMR3B-201ENST00000304915 785 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
VMP1Q96GC9 ODF3-202ENST00000342593 386 ntTSL 5 BASIC5.89□□□□□ -1.47
VMP1Q96GC9 RNU4-23P-201ENST00000362839 140 ntBASIC5.89□□□□□ -1.47
VMP1Q96GC9 OR2L2-201ENST00000366479 1134 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
VMP1Q96GC9 YWHAZP6-201ENST00000399764 738 ntBASIC5.89□□□□□ -1.47
VMP1Q96GC9 AL136131.1-201ENST00000406079 803 ntBASIC5.89□□□□□ -1.47
VMP1Q96GC9 U3.43-201ENST00000410734 213 ntBASIC5.89□□□□□ -1.47
VMP1Q96GC9 RN7SKP17-201ENST00000411242 351 ntBASIC5.89□□□□□ -1.47
VMP1Q96GC9 AC078883.1-203ENST00000416080 654 ntTSL 3 BASIC5.89□□□□□ -1.47
VMP1Q96GC9 AL606534.4-201ENST00000427176 792 ntTSL 5 BASIC5.89□□□□□ -1.47
VMP1Q96GC9 AL590399.2-201ENST00000427536 309 ntBASIC5.89□□□□□ -1.47
VMP1Q96GC9 IGLV3-4-201ENST00000432300 244 ntBASIC5.89□□□□□ -1.47
VMP1Q96GC9 AC094019.1-201ENST00000434678 472 ntBASIC5.89□□□□□ -1.47
VMP1Q96GC9 AL139294.1-201ENST00000435739 512 ntTSL 2 BASIC5.89□□□□□ -1.47
VMP1Q96GC9 CCRL1P1-201ENST00000449542 1053 ntBASIC5.89□□□□□ -1.47
VMP1Q96GC9 AC069277.2-201ENST00000454211 432 ntBASIC5.89□□□□□ -1.47
VMP1Q96GC9 AC018450.1-202ENST00000465880 529 ntTSL 4 BASIC5.89□□□□□ -1.47
VMP1Q96GC9 AC090602.1-201ENST00000469695 252 ntBASIC5.89□□□□□ -1.47
VMP1Q96GC9 RN7SL326P-201ENST00000477493 296 ntBASIC5.89□□□□□ -1.47
VMP1Q96GC9 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC5.89□□□□□ -1.47
VMP1Q96GC9 OR4D12P-201ENST00000509361 911 ntBASIC5.89□□□□□ -1.47
VMP1Q96GC9 SNX18P25-201ENST00000510539 758 ntBASIC5.89□□□□□ -1.47
VMP1Q96GC9 APOBEC3AP1-201ENST00000511396 287 ntBASIC5.89□□□□□ -1.47
VMP1Q96GC9 LINC01598-206ENST00000513381 499 ntTSL 4 BASIC5.89□□□□□ -1.47
VMP1Q96GC9 AC009879.1-201ENST00000520029 839 ntBASIC5.89□□□□□ -1.47
VMP1Q96GC9 TPT1-AS1-207ENST00000520310 563 ntTSL 5 BASIC5.89□□□□□ -1.47
VMP1Q96GC9 AC027117.1-201ENST00000520646 667 ntTSL 5 BASIC5.89□□□□□ -1.47
VMP1Q96GC9 AC068389.4-201ENST00000531379 689 ntTSL 3 BASIC5.89□□□□□ -1.47
VMP1Q96GC9 GMDS-AS1-212ENST00000534160 720 ntTSL 3 BASIC5.89□□□□□ -1.47
VMP1Q96GC9 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC5.89□□□□□ -1.47
VMP1Q96GC9 AC009120.3-201ENST00000563335 499 ntBASIC5.89□□□□□ -1.47
VMP1Q96GC9 AC090651.1-201ENST00000567865 634 ntBASIC5.89□□□□□ -1.47
VMP1Q96GC9 AC009054.1-201ENST00000568140 427 ntTSL 3 BASIC5.89□□□□□ -1.47
VMP1Q96GC9 AC008914.1-201ENST00000576302 797 ntTSL 3 BASIC5.89□□□□□ -1.47
VMP1Q96GC9 AC233702.7-202ENST00000582941 211 ntBASIC5.89□□□□□ -1.47
VMP1Q96GC9 SNX6P1-201ENST00000601728 1224 ntBASIC5.89□□□□□ -1.47
VMP1Q96GC9 AL008723.3-201ENST00000608926 449 ntBASIC5.89□□□□□ -1.47
VMP1Q96GC9 MIR6721-201ENST00000617181 87 ntBASIC5.89□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 90.7 ms