Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 HMGB3P24-201ENST00000433260 622 ntBASIC5.79□□□□□ -1.48
ECHDC3Q96DC8 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC5.79□□□□□ -1.48
ECHDC3Q96DC8 OR7E116P-201ENST00000448529 957 ntBASIC5.79□□□□□ -1.48
ECHDC3Q96DC8 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC5.79□□□□□ -1.48
ECHDC3Q96DC8 RPL32P33-201ENST00000487023 394 ntBASIC5.79□□□□□ -1.48
ECHDC3Q96DC8 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC5.79□□□□□ -1.48
ECHDC3Q96DC8 IGKV3D-34-201ENST00000522638 302 ntBASIC5.79□□□□□ -1.48
ECHDC3Q96DC8 HMGB1P42-201ENST00000532126 553 ntBASIC5.79□□□□□ -1.48
ECHDC3Q96DC8 AP000619.2-201ENST00000546014 969 ntBASIC5.79□□□□□ -1.48
ECHDC3Q96DC8 SLC7A7-210ENST00000554517 1158 ntTSL 5 BASIC5.79□□□□□ -1.48
ECHDC3Q96DC8 AC010547.6-201ENST00000571789 193 ntBASIC5.79□□□□□ -1.48
ECHDC3Q96DC8 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC5.79□□□□□ -1.48
ECHDC3Q96DC8 MRO-208ENST00000588444 866 ntTSL 3 BASIC5.79□□□□□ -1.48
ECHDC3Q96DC8 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC5.79□□□□□ -1.48
ECHDC3Q96DC8 AC026124.2-201ENST00000621847 656 ntBASIC5.79□□□□□ -1.48
ECHDC3Q96DC8 AP002008.2-205ENST00000637111 1091 ntTSL 5 BASIC5.79□□□□□ -1.48
ECHDC3Q96DC8 AC087565.3-203ENST00000641018 837 ntBASIC5.79□□□□□ -1.48
ECHDC3Q96DC8 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC5.79□□□□□ -1.48
ECHDC3Q96DC8 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
ECHDC3Q96DC8 GABRA2-205ENST00000507069 1562 ntTSL 3 BASIC5.79□□□□□ -1.48
ECHDC3Q96DC8 AL132656.3-201ENST00000606384 1595 ntBASIC5.79□□□□□ -1.48
ECHDC3Q96DC8 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC5.79□□□□□ -1.48
ECHDC3Q96DC8 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
ECHDC3Q96DC8 NUF2-202ENST00000367900 1842 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
ECHDC3Q96DC8 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
ECHDC3Q96DC8 VNN3-203ENST00000392393 1603 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
ECHDC3Q96DC8 UGT2B15-201ENST00000338206 2077 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
ECHDC3Q96DC8 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC5.78□□□□□ -1.48
ECHDC3Q96DC8 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC5.78□□□□□ -1.48
ECHDC3Q96DC8 SLC30A7-203ENST00000370112 7898 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
ECHDC3Q96DC8 CYTOR-204ENST00000409898 560 ntTSL 5 BASIC5.78□□□□□ -1.48
ECHDC3Q96DC8 SDHDP6-201ENST00000414693 480 ntBASIC5.78□□□□□ -1.48
ECHDC3Q96DC8 BMS1P17-202ENST00000416720 316 ntBASIC5.78□□□□□ -1.48
ECHDC3Q96DC8 GPC5-AS2-201ENST00000417589 401 ntTSL 3 BASIC5.78□□□□□ -1.48
ECHDC3Q96DC8 NIFKP3-201ENST00000417799 865 ntBASIC5.78□□□□□ -1.48
ECHDC3Q96DC8 NENFP1-201ENST00000419476 466 ntBASIC5.78□□□□□ -1.48
ECHDC3Q96DC8 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC5.78□□□□□ -1.48
ECHDC3Q96DC8 RPL34P3-201ENST00000421454 338 ntBASIC5.78□□□□□ -1.48
ECHDC3Q96DC8 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
ECHDC3Q96DC8 BX119321.1-201ENST00000428912 797 ntBASIC5.78□□□□□ -1.48
ECHDC3Q96DC8 AC064862.4-201ENST00000442180 334 ntBASIC5.78□□□□□ -1.48
ECHDC3Q96DC8 HMGN1P36-201ENST00000446623 298 ntBASIC5.78□□□□□ -1.48
ECHDC3Q96DC8 AL358876.1-201ENST00000453364 1075 ntBASIC5.78□□□□□ -1.48
ECHDC3Q96DC8 MIR4435-2HG-214ENST00000453478 560 ntTSL 4 BASIC5.78□□□□□ -1.48
ECHDC3Q96DC8 RPS27AP2-201ENST00000457576 465 ntBASIC5.78□□□□□ -1.48
ECHDC3Q96DC8 AC004692.2-203ENST00000458590 497 ntTSL 4 BASIC5.78□□□□□ -1.48
ECHDC3Q96DC8 CR383656.1-201ENST00000484916 377 ntBASIC5.78□□□□□ -1.48
ECHDC3Q96DC8 AC124017.1-201ENST00000508112 1594 ntTSL 5 BASIC5.78□□□□□ -1.48
ECHDC3Q96DC8 MTATP6P1-201ENST00000514057 681 ntBASIC5.78□□□□□ -1.48
ECHDC3Q96DC8 HGNC:24955-208ENST00000521585 1260 ntTSL 4 BASIC5.78□□□□□ -1.48
ECHDC3Q96DC8 MRPS16P1-201ENST00000523462 412 ntBASIC5.78□□□□□ -1.48
ECHDC3Q96DC8 ANP32E-205ENST00000533654 908 ntTSL 2 BASIC5.78□□□□□ -1.48
ECHDC3Q96DC8 LINC02319-201ENST00000555852 349 ntTSL 3 BASIC5.78□□□□□ -1.48
ECHDC3Q96DC8 AC114488.3-201ENST00000581333 480 ntTSL 4 BASIC5.78□□□□□ -1.48
ECHDC3Q96DC8 AC011503.1-201ENST00000596326 1585 ntTSL 2 BASIC5.78□□□□□ -1.48
ECHDC3Q96DC8 ZNF208-204ENST00000599916 740 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
ECHDC3Q96DC8 NANOGP3-201ENST00000605855 286 ntBASIC5.78□□□□□ -1.48
ECHDC3Q96DC8 RNA5SP440-201ENST00000612665 119 ntBASIC5.78□□□□□ -1.48
ECHDC3Q96DC8 AC021422.1-201ENST00000621212 473 ntBASIC5.78□□□□□ -1.48
ECHDC3Q96DC8 AL353684.1-201ENST00000622677 1120 ntBASIC5.78□□□□□ -1.48
ECHDC3Q96DC8 AL512356.3-201ENST00000623005 461 ntBASIC5.78□□□□□ -1.48
ECHDC3Q96DC8 AP004607.3-201ENST00000530354 3915 ntBASIC5.78□□□□□ -1.48
ECHDC3Q96DC8 ZNF23-207ENST00000564528 3020 ntAPPRIS ALT2 TSL 2 BASIC5.78□□□□□ -1.48
ECHDC3Q96DC8 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
ECHDC3Q96DC8 DAB2-209ENST00000509337 2740 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
ECHDC3Q96DC8 ALG11-202ENST00000521508 2558 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
ECHDC3Q96DC8 KLHL4-201ENST00000373114 2445 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
ECHDC3Q96DC8 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
ECHDC3Q96DC8 CLEC6A-201ENST00000382073 1682 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
ECHDC3Q96DC8 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC5.78□□□□□ -1.48
ECHDC3Q96DC8 LINC02397-201ENST00000504409 10626 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
ECHDC3Q96DC8 FCHSD2-208ENST00000458644 2215 ntTSL 2 BASIC5.78□□□□□ -1.48
ECHDC3Q96DC8 PMFBP1-207ENST00000537465 3935 ntAPPRIS ALT2 TSL 2 BASIC5.78□□□□□ -1.48
ECHDC3Q96DC8 AL355306.2-206ENST00000635233 1903 ntTSL 5 BASIC5.78□□□□□ -1.48
ECHDC3Q96DC8 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
ECHDC3Q96DC8 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC5.77□□□□□ -1.48
ECHDC3Q96DC8 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC5.77□□□□□ -1.49
ECHDC3Q96DC8 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC5.77□□□□□ -1.49
ECHDC3Q96DC8 ZCCHC6-201ENST00000277141 5724 ntTSL 2 BASIC5.77□□□□□ -1.49
ECHDC3Q96DC8 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC5.77□□□□□ -1.49
ECHDC3Q96DC8 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC5.77□□□□□ -1.49
ECHDC3Q96DC8 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC5.77□□□□□ -1.49
ECHDC3Q96DC8 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC5.77□□□□□ -1.49
ECHDC3Q96DC8 TTC41P-205ENST00000551270 3963 ntBASIC5.77□□□□□ -1.49
ECHDC3Q96DC8 MIR130A-201ENST00000385274 89 ntBASIC5.77□□□□□ -1.49
ECHDC3Q96DC8 SNORA17A-201ENST00000391185 133 ntBASIC5.77□□□□□ -1.49
ECHDC3Q96DC8 CEACAM7-202ENST00000401731 1236 ntAPPRIS P1 TSL 2 BASIC5.77□□□□□ -1.49
ECHDC3Q96DC8 BCL11A-205ENST00000409351 756 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
ECHDC3Q96DC8 KCNJ13-202ENST00000409779 1099 ntTSL 2 BASIC5.77□□□□□ -1.49
ECHDC3Q96DC8 RN7SKP279-201ENST00000411383 298 ntBASIC5.77□□□□□ -1.49
ECHDC3Q96DC8 AC017078.1-201ENST00000416146 368 ntBASIC5.77□□□□□ -1.49
ECHDC3Q96DC8 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC5.77□□□□□ -1.49
ECHDC3Q96DC8 AL158817.1-201ENST00000422310 933 ntTSL 3 BASIC5.77□□□□□ -1.49
ECHDC3Q96DC8 VN1R21P-201ENST00000426703 765 ntBASIC5.77□□□□□ -1.49
ECHDC3Q96DC8 CRIP1P1-201ENST00000427567 185 ntBASIC5.77□□□□□ -1.49
ECHDC3Q96DC8 RNF219-AS1-202ENST00000444769 590 ntTSL 4 BASIC5.77□□□□□ -1.49
ECHDC3Q96DC8 AL161636.2-201ENST00000445179 927 ntBASIC5.77□□□□□ -1.49
ECHDC3Q96DC8 LRRC37A14P-201ENST00000452297 462 ntBASIC5.77□□□□□ -1.49
ECHDC3Q96DC8 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC5.77□□□□□ -1.49
ECHDC3Q96DC8 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC5.77□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 120.3 ms