Protein–RNA interactions for Protein: Q969F9

HPS3, Hermansky-Pudlak syndrome 3 protein, humanhuman

Predictions only

Length 1,004 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3Q969F9 AC090181.3-201ENST00000624777 1514 ntBASIC6.77□□□□□ -1.33
HPS3Q969F9 ZC3H12C-202ENST00000453089 9542 ntTSL 2 BASIC6.77□□□□□ -1.33
HPS3Q969F9 BDNF-205ENST00000395981 4071 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
HPS3Q969F9 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC6.77□□□□□ -1.33
HPS3Q969F9 TSPAN8-201ENST00000247829 1227 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
HPS3Q969F9 ANAPC10-201ENST00000309439 868 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
HPS3Q969F9 MTHFD2P5-201ENST00000320415 844 ntBASIC6.77□□□□□ -1.33
HPS3Q969F9 PRB3-201ENST00000381842 1091 ntAPPRIS ALT2 TSL 5 BASIC6.77□□□□□ -1.33
HPS3Q969F9 SYCE3-202ENST00000406915 448 ntAPPRIS P1 TSL 2 BASIC6.77□□□□□ -1.33
HPS3Q969F9 AL139805.1-201ENST00000407837 289 ntBASIC6.77□□□□□ -1.33
HPS3Q969F9 AC078960.1-201ENST00000422160 177 ntTSL 5 BASIC6.77□□□□□ -1.33
HPS3Q969F9 AC092865.3-201ENST00000425390 1026 ntBASIC6.77□□□□□ -1.33
HPS3Q969F9 AC108479.1-201ENST00000431142 427 ntBASIC6.77□□□□□ -1.33
HPS3Q969F9 AC007563.3-201ENST00000433233 371 ntBASIC6.77□□□□□ -1.33
HPS3Q969F9 PTP4A1P3-201ENST00000433661 420 ntBASIC6.77□□□□□ -1.33
HPS3Q969F9 AC211433.1-202ENST00000434256 1187 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
HPS3Q969F9 AL022337.1-201ENST00000434510 357 ntTSL 3 BASIC6.77□□□□□ -1.33
HPS3Q969F9 AL109807.1-201ENST00000438222 569 ntTSL 3 BASIC6.77□□□□□ -1.33
HPS3Q969F9 AL157884.3-201ENST00000448273 1184 ntBASIC6.77□□□□□ -1.33
HPS3Q969F9 PFN2-209ENST00000481275 560 ntTSL 4 BASIC6.77□□□□□ -1.33
HPS3Q969F9 AL035690.1-201ENST00000490892 383 ntBASIC6.77□□□□□ -1.33
HPS3Q969F9 RN7SL568P-201ENST00000493069 298 ntBASIC6.77□□□□□ -1.33
HPS3Q969F9 MTCO1P31-201ENST00000506355 492 ntBASIC6.77□□□□□ -1.33
HPS3Q969F9 LINC02503-201ENST00000510505 812 ntTSL 2 BASIC6.77□□□□□ -1.33
HPS3Q969F9 AC006296.1-201ENST00000514401 591 ntTSL 2 BASIC6.77□□□□□ -1.33
HPS3Q969F9 AC040970.1-202ENST00000517908 505 ntTSL 3 BASIC6.77□□□□□ -1.33
HPS3Q969F9 TPT1-AS1-207ENST00000520310 563 ntTSL 5 BASIC6.77□□□□□ -1.33
HPS3Q969F9 OR4A41P-201ENST00000533053 928 ntBASIC6.77□□□□□ -1.33
HPS3Q969F9 AP003031.2-202ENST00000533590 572 ntTSL 4 BASIC6.77□□□□□ -1.33
HPS3Q969F9 AP002815.1-201ENST00000533740 386 ntTSL 3 BASIC6.77□□□□□ -1.33
HPS3Q969F9 C3orf14-207ENST00000542214 768 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
HPS3Q969F9 AL157756.1-203ENST00000553269 600 ntTSL 3 BASIC6.77□□□□□ -1.33
HPS3Q969F9 AC121758.1-202ENST00000556917 658 ntBASIC6.77□□□□□ -1.33
HPS3Q969F9 AC007494.1-201ENST00000562293 760 ntBASIC6.77□□□□□ -1.33
HPS3Q969F9 AC005726.4-201ENST00000582858 458 ntBASIC6.77□□□□□ -1.33
HPS3Q969F9 TTN-AS1-226ENST00000588716 604 ntTSL 5 BASIC6.77□□□□□ -1.33
HPS3Q969F9 MIR132-201ENST00000591554 101 ntBASIC6.77□□□□□ -1.33
HPS3Q969F9 LINC01198-204ENST00000594153 552 ntTSL 3 BASIC6.77□□□□□ -1.33
HPS3Q969F9 BNIP3P40-201ENST00000596017 556 ntBASIC6.77□□□□□ -1.33
HPS3Q969F9 AP001823.1-201ENST00000604056 1003 ntBASIC6.77□□□□□ -1.33
HPS3Q969F9 AL592494.3-201ENST00000609485 464 ntBASIC6.77□□□□□ -1.33
HPS3Q969F9 AC018926.1-201ENST00000616335 435 ntBASIC6.77□□□□□ -1.33
HPS3Q969F9 AC023510.2-201ENST00000622162 746 ntBASIC6.77□□□□□ -1.33
HPS3Q969F9 OR2L8-201ENST00000623922 939 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
HPS3Q969F9 AC111152.1-202ENST00000635848 339 ntBASIC6.77□□□□□ -1.33
HPS3Q969F9 WDR35-201ENST00000281405 6918 ntAPPRIS P3 TSL 1 (best) BASIC6.77□□□□□ -1.33
HPS3Q969F9 SLC2A14-221ENST00000616981 3366 ntAPPRIS P3 TSL 5 BASIC6.77□□□□□ -1.33
HPS3Q969F9 SAMM50P1-201ENST00000455403 1399 ntBASIC6.77□□□□□ -1.33
HPS3Q969F9 AC016747.4-201ENST00000462959 1383 ntTSL 2 BASIC6.77□□□□□ -1.33
HPS3Q969F9 HSD17B4-202ENST00000414835 2551 ntTSL 2 BASIC6.77□□□□□ -1.33
HPS3Q969F9 SLC1A2-202ENST00000395750 11538 ntAPPRIS ALT1 TSL 1 (best) BASIC6.77□□□□□ -1.33
HPS3Q969F9 SLC17A4-202ENST00000397076 2331 ntTSL 2 BASIC6.77□□□□□ -1.33
HPS3Q969F9 DTNA-207ENST00000444659 6343 ntAPPRIS ALT2 TSL 5 BASIC6.77□□□□□ -1.33
HPS3Q969F9 RBM41-201ENST00000372479 1662 ntAPPRIS P3 TSL 1 (best) BASIC6.77□□□□□ -1.33
HPS3Q969F9 DHRS9-204ENST00000428522 1678 ntAPPRIS P1 TSL 5 BASIC6.77□□□□□ -1.33
HPS3Q969F9 CDKL5-205ENST00000623535 12533 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
HPS3Q969F9 KIAA1328-202ENST00000586135 1863 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
HPS3Q969F9 CNOT1-202ENST00000441024 4999 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
HPS3Q969F9 NAV1-201ENST00000367295 11645 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
HPS3Q969F9 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC6.76□□□□□ -1.33
HPS3Q969F9 FYB2-201ENST00000343433 3135 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
HPS3Q969F9 CFAP70-202ENST00000340329 1403 ntTSL 5 BASIC6.76□□□□□ -1.33
HPS3Q969F9 AL356317.1-201ENST00000396110 1436 ntBASIC6.76□□□□□ -1.33
HPS3Q969F9 MCM8-201ENST00000265187 3442 ntAPPRIS ALT2 TSL 1 (best) BASIC6.76□□□□□ -1.33
HPS3Q969F9 THEMIS-206ENST00000630369 2786 ntAPPRIS ALT2 TSL 1 (best) BASIC6.76□□□□□ -1.33
HPS3Q969F9 NEGR1-202ENST00000357731 12811 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
HPS3Q969F9 PKIA-201ENST00000352966 1736 ntAPPRIS P1 TSL 2 BASIC6.76□□□□□ -1.33
HPS3Q969F9 PSD3-202ENST00000327040 11689 ntAPPRIS ALT2 TSL 1 (best) BASIC6.76□□□□□ -1.33
HPS3Q969F9 EDA2R-204ENST00000451436 3464 ntAPPRIS P3 TSL 5 BASIC6.76□□□□□ -1.33
HPS3Q969F9 SMARCE1-208ENST00000474246 2124 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
HPS3Q969F9 AC068769.1-201ENST00000474767 2426 ntBASIC6.76□□□□□ -1.33
HPS3Q969F9 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC6.76□□□□□ -1.33
HPS3Q969F9 SNORA70.9-201ENST00000384370 135 ntBASIC6.76□□□□□ -1.33
HPS3Q969F9 RPL7P58-201ENST00000402913 758 ntBASIC6.76□□□□□ -1.33
HPS3Q969F9 RN7SKP144-201ENST00000411108 279 ntBASIC6.76□□□□□ -1.33
HPS3Q969F9 RANP4-201ENST00000413361 655 ntBASIC6.76□□□□□ -1.33
HPS3Q969F9 AL096829.1-201ENST00000413677 457 ntBASIC6.76□□□□□ -1.33
HPS3Q969F9 AL445224.1-201ENST00000420595 737 ntTSL 5 BASIC6.76□□□□□ -1.33
HPS3Q969F9 AC023141.3-201ENST00000436698 278 ntBASIC6.76□□□□□ -1.33
HPS3Q969F9 ZNF619P1-201ENST00000446539 752 ntBASIC6.76□□□□□ -1.33
HPS3Q969F9 OR7E22P-201ENST00000478335 1035 ntBASIC6.76□□□□□ -1.33
HPS3Q969F9 RPS27P20-201ENST00000492051 246 ntBASIC6.76□□□□□ -1.33
HPS3Q969F9 HMGB1P3-201ENST00000502802 616 ntBASIC6.76□□□□□ -1.33
HPS3Q969F9 OR7E99P-201ENST00000505750 922 ntBASIC6.76□□□□□ -1.33
HPS3Q969F9 AC112242.1-201ENST00000515805 406 ntTSL 3 BASIC6.76□□□□□ -1.33
HPS3Q969F9 TPM3P3-201ENST00000521343 354 ntBASIC6.76□□□□□ -1.33
HPS3Q969F9 AC090150.1-201ENST00000521408 585 ntTSL 4 BASIC6.76□□□□□ -1.33
HPS3Q969F9 MTND1P6-201ENST00000523621 946 ntBASIC6.76□□□□□ -1.33
HPS3Q969F9 AP005436.1-201ENST00000531454 488 ntTSL 2 BASIC6.76□□□□□ -1.33
HPS3Q969F9 VEPH1-219ENST00000537559 992 ntTSL 5 BASIC6.76□□□□□ -1.33
HPS3Q969F9 BICD1-206ENST00000551086 423 ntTSL 3 BASIC6.76□□□□□ -1.33
HPS3Q969F9 AC040918.1-201ENST00000560056 632 ntTSL 2 BASIC6.76□□□□□ -1.33
HPS3Q969F9 MIR4701-201ENST00000583094 63 ntBASIC6.76□□□□□ -1.33
HPS3Q969F9 LINC01908-201ENST00000583148 555 ntTSL 4 BASIC6.76□□□□□ -1.33
HPS3Q969F9 AC119868.1-202ENST00000584741 347 ntTSL 2 BASIC6.76□□□□□ -1.33
HPS3Q969F9 AC020915.3-201ENST00000595301 550 ntTSL 5 BASIC6.76□□□□□ -1.33
HPS3Q969F9 LINC01966-201ENST00000595809 821 ntTSL 5 BASIC6.76□□□□□ -1.33
HPS3Q969F9 AC004775.1-201ENST00000607389 753 ntBASIC6.76□□□□□ -1.33
HPS3Q969F9 AL161457.2-204ENST00000609241 869 ntTSL 5 BASIC6.76□□□□□ -1.33
HPS3Q969F9 OSTC-205ENST00000613215 876 ntTSL 2 BASIC6.76□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 69.4 ms