Protein–RNA interactions for Protein: Q95604

HLA-C, HLA class I histocompatibility antigen, Cw-17 alpha chain, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-CQ95604 IQCK-206ENST00000564186 882 ntAPPRIS ALT2 TSL 2 BASIC8.13□□□□□ -1.11
HLA-CQ95604 MT1L-202ENST00000566367 78 ntBASIC8.13□□□□□ -1.11
HLA-CQ95604 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC8.13□□□□□ -1.11
HLA-CQ95604 AC009977.1-201ENST00000586015 570 ntBASIC8.13□□□□□ -1.11
HLA-CQ95604 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC8.13□□□□□ -1.11
HLA-CQ95604 AC006504.6-201ENST00000590142 199 ntBASIC8.13□□□□□ -1.11
HLA-CQ95604 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
HLA-CQ95604 RPL12P25-202ENST00000598100 674 ntBASIC8.13□□□□□ -1.11
HLA-CQ95604 AL589935.1-201ENST00000602418 488 ntTSL 4 BASIC8.13□□□□□ -1.11
HLA-CQ95604 COX6CP16-201ENST00000603667 216 ntBASIC8.13□□□□□ -1.11
HLA-CQ95604 PRELID3BP8-201ENST00000604148 295 ntBASIC8.13□□□□□ -1.11
HLA-CQ95604 AC087623.4-201ENST00000606593 695 ntBASIC8.13□□□□□ -1.11
HLA-CQ95604 RN7SL778P-201ENST00000607160 297 ntBASIC8.13□□□□□ -1.11
HLA-CQ95604 CT45A7-201ENST00000610598 996 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
HLA-CQ95604 U6.107-201ENST00000637108 79 ntBASIC8.13□□□□□ -1.11
HLA-CQ95604 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC8.13□□□□□ -1.11
HLA-CQ95604 OR8G5-202ENST00000641707 1156 ntAPPRIS P1 BASIC8.13□□□□□ -1.11
HLA-CQ95604 MTND5P23-201ENST00000430812 1655 ntBASIC8.13□□□□□ -1.11
HLA-CQ95604 LINC01258-201ENST00000512517 2059 ntTSL 2 BASIC8.13□□□□□ -1.11
HLA-CQ95604 ZNF726-206ENST00000594466 2473 ntTSL 5 BASIC8.13□□□□□ -1.11
HLA-CQ95604 PPP1R11-206ENST00000376773 1640 ntTSL 3 BASIC8.13□□□□□ -1.11
HLA-CQ95604 ENTPD1-201ENST00000371205 2035 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
HLA-CQ95604 AC021242.1-201ENST00000507315 2035 ntBASIC8.13□□□□□ -1.11
HLA-CQ95604 PUM1-203ENST00000373742 3515 ntTSL 2 BASIC8.13□□□□□ -1.11
HLA-CQ95604 LL22NC03-63E9.3-201ENST00000407120 3111 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
HLA-CQ95604 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
HLA-CQ95604 MRPL22-201ENST00000265229 3035 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
HLA-CQ95604 MRPL30-201ENST00000338148 2605 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
HLA-CQ95604 INTS7-201ENST00000366992 3380 ntTSL 2 BASIC8.13□□□□□ -1.11
HLA-CQ95604 SBF2-201ENST00000256190 7439 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
HLA-CQ95604 MED21-201ENST00000282892 1753 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
HLA-CQ95604 AC093909.5-201ENST00000621839 1799 ntBASIC8.12□□□□□ -1.11
HLA-CQ95604 MXRA7-207ENST00000592148 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC8.12□□□□□ -1.11
HLA-CQ95604 AL445235.1-201ENST00000431202 1747 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
HLA-CQ95604 EEF1A1P22-201ENST00000559385 1380 ntBASIC8.12□□□□□ -1.11
HLA-CQ95604 GSDMC-201ENST00000276708 2714 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
HLA-CQ95604 ZNF611-206ENST00000595798 2395 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
HLA-CQ95604 LINC00501-201ENST00000425388 2046 ntTSL 2 BASIC8.12□□□□□ -1.11
HLA-CQ95604 FAM193A-210ENST00000545951 3987 ntAPPRIS ALT2 TSL 5 BASIC8.12□□□□□ -1.11
HLA-CQ95604 PDLIM5-221ENST00000542407 2979 ntAPPRIS ALT1 TSL 1 (best) BASIC8.12□□□□□ -1.11
HLA-CQ95604 AL133384.2-201ENST00000623755 2954 ntBASIC8.12□□□□□ -1.11
HLA-CQ95604 SPINK5-203ENST00000398454 2915 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
HLA-CQ95604 MCM3-207ENST00000616552 3208 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
HLA-CQ95604 Y_RNA.216-201ENST00000364205 93 ntBASIC8.12□□□□□ -1.11
HLA-CQ95604 RNU6-619P-201ENST00000365146 108 ntBASIC8.12□□□□□ -1.11
HLA-CQ95604 SNORD81.2-201ENST00000365153 76 ntBASIC8.12□□□□□ -1.11
HLA-CQ95604 SNRNP40-202ENST00000373720 1087 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
HLA-CQ95604 PAGE2B-202ENST00000374974 456 ntTSL 5 BASIC8.12□□□□□ -1.11
HLA-CQ95604 Y_RNA.394-201ENST00000383942 103 ntBASIC8.12□□□□□ -1.11
HLA-CQ95604 Y_RNA.422-201ENST00000384054 114 ntBASIC8.12□□□□□ -1.11
HLA-CQ95604 TRAJ46-201ENST00000390491 63 ntAPPRIS P1 BASIC8.12□□□□□ -1.11
HLA-CQ95604 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC8.12□□□□□ -1.11
HLA-CQ95604 SNORA11C-201ENST00000408532 129 ntBASIC8.12□□□□□ -1.11
HLA-CQ95604 AL591368.1-202ENST00000413050 548 ntTSL 3 BASIC8.12□□□□□ -1.11
HLA-CQ95604 OR13C7-201ENST00000424348 959 ntAPPRIS P1 BASIC8.12□□□□□ -1.11
HLA-CQ95604 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC8.12□□□□□ -1.11
HLA-CQ95604 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC8.12□□□□□ -1.11
HLA-CQ95604 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC8.12□□□□□ -1.11
HLA-CQ95604 SDCBPP1-201ENST00000440192 890 ntBASIC8.12□□□□□ -1.11
HLA-CQ95604 RPS26P30-201ENST00000443431 335 ntBASIC8.12□□□□□ -1.11
HLA-CQ95604 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC8.12□□□□□ -1.11
HLA-CQ95604 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC8.12□□□□□ -1.11
HLA-CQ95604 AC022080.2-201ENST00000452932 533 ntBASIC8.12□□□□□ -1.11
HLA-CQ95604 NDUFB3-204ENST00000454214 547 ntAPPRIS P1 TSL 2 BASIC8.12□□□□□ -1.11
HLA-CQ95604 RN7SL688P-201ENST00000471754 275 ntBASIC8.12□□□□□ -1.11
HLA-CQ95604 AC008957.1-203ENST00000508745 589 ntTSL 3 BASIC8.12□□□□□ -1.11
HLA-CQ95604 RNU6-1004P-201ENST00000516584 111 ntBASIC8.12□□□□□ -1.11
HLA-CQ95604 IGHV7-40-201ENST00000520963 296 ntBASIC8.12□□□□□ -1.11
HLA-CQ95604 AC104009.1-201ENST00000528009 635 ntTSL 3 BASIC8.12□□□□□ -1.11
HLA-CQ95604 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC8.12□□□□□ -1.11
HLA-CQ95604 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC8.12□□□□□ -1.11
HLA-CQ95604 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC8.12□□□□□ -1.11
HLA-CQ95604 LINC01855-201ENST00000585520 396 ntTSL 3 BASIC8.12□□□□□ -1.11
HLA-CQ95604 ACP5-208ENST00000590420 301 ntTSL 5 BASIC8.12□□□□□ -1.11
HLA-CQ95604 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC8.12□□□□□ -1.11
HLA-CQ95604 AL355802.3-201ENST00000607571 545 ntBASIC8.12□□□□□ -1.11
HLA-CQ95604 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC8.12□□□□□ -1.11
HLA-CQ95604 AC211486.5-201ENST00000616609 775 ntTSL 3 BASIC8.12□□□□□ -1.11
HLA-CQ95604 AL158196.1-201ENST00000616786 434 ntBASIC8.12□□□□□ -1.11
HLA-CQ95604 AC234782.5-201ENST00000617723 324 ntBASIC8.12□□□□□ -1.11
HLA-CQ95604 ZNF100-202ENST00000358296 5745 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
HLA-CQ95604 CEBPZOS-204ENST00000402297 3158 ntAPPRIS P1 TSL 2 BASIC8.12□□□□□ -1.11
HLA-CQ95604 IL2RA-202ENST00000379954 1562 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
HLA-CQ95604 CASC23-201ENST00000534076 1563 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
HLA-CQ95604 FAM111A-202ENST00000420244 3780 ntAPPRIS P1 TSL 3 BASIC8.12□□□□□ -1.11
HLA-CQ95604 MYO6-208ENST00000627432 4074 ntTSL 5 BASIC8.12□□□□□ -1.11
HLA-CQ95604 ZNF195-203ENST00000343338 3145 ntAPPRIS ALT2 TSL 4 BASIC8.12□□□□□ -1.11
HLA-CQ95604 DBF4P1-201ENST00000412976 1892 ntBASIC8.12□□□□□ -1.11
HLA-CQ95604 SVEP1-202ENST00000374469 12194 ntAPPRIS P2 TSL 5 BASIC8.12□□□□□ -1.11
HLA-CQ95604 LINC01304-204ENST00000454455 2454 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
HLA-CQ95604 PAAF1-202ENST00000376384 1500 ntTSL 5 BASIC8.12□□□□□ -1.11
HLA-CQ95604 EXOC6-204ENST00000443748 3310 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
HLA-CQ95604 MAP3K9-207ENST00000611979 10497 ntTSL 5 BASIC8.12□□□□□ -1.11
HLA-CQ95604 ZNF778-201ENST00000306502 2386 ntTSL 2 BASIC8.12□□□□□ -1.11
HLA-CQ95604 HEPACAM2-203ENST00000440868 2060 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
HLA-CQ95604 TXNRD1-208ENST00000525566 3836 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
HLA-CQ95604 TMPPE-202ENST00000416695 3451 ntAPPRIS ALT2 TSL 2 BASIC8.12□□□□□ -1.11
HLA-CQ95604 ASAP1-IT2-201ENST00000626977 2031 ntBASIC8.12□□□□□ -1.11
HLA-CQ95604 SH2D4B-202ENST00000339284 3983 ntAPPRIS P1 TSL 2 BASIC8.12□□□□□ -1.11
HLA-CQ95604 DCAF1-202ENST00000423656 5946 ntAPPRIS P4 TSL 5 BASIC8.11□□□□□ -1.11
Retrieved 100 of 98,524 protein–RNA pairs in 173.3 ms