Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC3.79□□□□□ -1.8
ALMS1Q8TCU4 AL353148.1-202ENST00000424701 551 ntTSL 2 BASIC3.79□□□□□ -1.8
ALMS1Q8TCU4 SLC6A13-202ENST00000436453 1101 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
ALMS1Q8TCU4 RPL7L1P3-201ENST00000455249 689 ntBASIC3.79□□□□□ -1.8
ALMS1Q8TCU4 RN7SL51P-201ENST00000468230 285 ntBASIC3.79□□□□□ -1.8
ALMS1Q8TCU4 NDUFA5P9-201ENST00000472609 340 ntBASIC3.79□□□□□ -1.8
ALMS1Q8TCU4 CCDC11P1-201ENST00000503137 1162 ntBASIC3.79□□□□□ -1.8
ALMS1Q8TCU4 EIF3KP3-201ENST00000514461 639 ntBASIC3.79□□□□□ -1.8
ALMS1Q8TCU4 PTER-205ENST00000535784 1203 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
ALMS1Q8TCU4 LINC01895-201ENST00000558690 404 ntTSL 5 BASIC3.79□□□□□ -1.8
ALMS1Q8TCU4 OR4H6P-201ENST00000563771 921 ntBASIC3.79□□□□□ -1.8
ALMS1Q8TCU4 AL352984.2-202ENST00000613699 155 ntBASIC3.79□□□□□ -1.8
ALMS1Q8TCU4 PGAP1-201ENST00000354764 11114 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
ALMS1Q8TCU4 B3GALT1-201ENST00000392690 5094 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
ALMS1Q8TCU4 AC013488.1-201ENST00000526618 1838 ntBASIC3.79□□□□□ -1.8
ALMS1Q8TCU4 RAD18-201ENST00000264926 5886 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
ALMS1Q8TCU4 BEND2-201ENST00000380030 1938 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
ALMS1Q8TCU4 FRMD6-202ENST00000356218 4768 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
ALMS1Q8TCU4 CTNND1-205ENST00000399050 6313 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
ALMS1Q8TCU4 UTY-202ENST00000331397 6529 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
ALMS1Q8TCU4 FARP1-219ENST00000596580 13532 ntTSL 5 BASIC3.79□□□□□ -1.8
ALMS1Q8TCU4 FBXO30-201ENST00000237281 9009 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
ALMS1Q8TCU4 AL035419.1-201ENST00000397037 564 ntBASIC3.79□□□□□ -1.8
ALMS1Q8TCU4 RPSAP35-201ENST00000413753 818 ntBASIC3.79□□□□□ -1.8
ALMS1Q8TCU4 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC3.79□□□□□ -1.8
ALMS1Q8TCU4 USP9YP9-201ENST00000429406 715 ntBASIC3.79□□□□□ -1.8
ALMS1Q8TCU4 RN7SL385P-201ENST00000468873 276 ntBASIC3.79□□□□□ -1.8
ALMS1Q8TCU4 AC106895.1-202ENST00000502956 777 ntTSL 3 BASIC3.79□□□□□ -1.8
ALMS1Q8TCU4 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC3.79□□□□□ -1.8
ALMS1Q8TCU4 AC020910.2-201ENST00000603635 610 ntBASIC3.79□□□□□ -1.8
ALMS1Q8TCU4 ZNF253-205ENST00000640599 1208 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
ALMS1Q8TCU4 NBPF19-206ENST00000621744 14425 ntTSL 5 BASIC3.79□□□□□ -1.8
ALMS1Q8TCU4 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC3.79□□□□□ -1.8
ALMS1Q8TCU4 RUNDC3A-AS1-202ENST00000588097 5203 ntTSL 5 BASIC3.79□□□□□ -1.8
ALMS1Q8TCU4 AC130304.1-201ENST00000622942 2385 ntBASIC3.79□□□□□ -1.8
ALMS1Q8TCU4 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
ALMS1Q8TCU4 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC3.78□□□□□ -1.8
ALMS1Q8TCU4 SPATA31A1-201ENST00000377647 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
ALMS1Q8TCU4 CASC8-203ENST00000502082 1420 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
ALMS1Q8TCU4 LRRC37A6P-202ENST00000448648 5444 ntBASIC3.78□□□□□ -1.8
ALMS1Q8TCU4 SNORA70.9-201ENST00000384370 135 ntBASIC3.78□□□□□ -1.8
ALMS1Q8TCU4 MYL6P5-201ENST00000412707 459 ntBASIC3.78□□□□□ -1.8
ALMS1Q8TCU4 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
ALMS1Q8TCU4 LINC00483-203ENST00000450727 686 ntTSL 3 BASIC3.78□□□□□ -1.8
ALMS1Q8TCU4 RPL7P16-201ENST00000479738 738 ntBASIC3.78□□□□□ -1.8
ALMS1Q8TCU4 RN7SL817P-201ENST00000480777 288 ntBASIC3.78□□□□□ -1.8
ALMS1Q8TCU4 AC068587.1-201ENST00000483613 781 ntBASIC3.78□□□□□ -1.8
ALMS1Q8TCU4 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
ALMS1Q8TCU4 FOPNL-207ENST00000575073 530 ntTSL 2 BASIC3.78□□□□□ -1.8
ALMS1Q8TCU4 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC3.78□□□□□ -1.8
ALMS1Q8TCU4 AL627230.1-201ENST00000613077 211 ntBASIC3.78□□□□□ -1.8
ALMS1Q8TCU4 AL591926.8-201ENST00000616876 211 ntBASIC3.78□□□□□ -1.8
ALMS1Q8TCU4 LRMDA-208ENST00000496424 3923 ntTSL 2 BASIC3.78□□□□□ -1.8
ALMS1Q8TCU4 NBPF12-206ENST00000617844 6326 ntAPPRIS P2 TSL 5 BASIC3.78□□□□□ -1.8
ALMS1Q8TCU4 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC3.78□□□□□ -1.8
ALMS1Q8TCU4 UBE4B-202ENST00000343090 5267 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
ALMS1Q8TCU4 VPS8-207ENST00000436792 5011 ntAPPRIS ALT1 TSL 2 BASIC3.78□□□□□ -1.8
ALMS1Q8TCU4 NUP155-207ENST00000513532 4088 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
ALMS1Q8TCU4 RNF145-206ENST00000519865 3478 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
ALMS1Q8TCU4 SLC7A14-201ENST00000231706 10103 ntAPPRIS P1 TSL 2 BASIC3.78□□□□□ -1.8
ALMS1Q8TCU4 MCM10-201ENST00000378694 4587 ntTSL 5 BASIC3.78□□□□□ -1.8
ALMS1Q8TCU4 TMEM257-201ENST00000408967 2441 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
ALMS1Q8TCU4 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
ALMS1Q8TCU4 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC3.78□□□□□ -1.8
ALMS1Q8TCU4 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC3.78□□□□□ -1.8
ALMS1Q8TCU4 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
ALMS1Q8TCU4 GTF3C3-202ENST00000409364 1736 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
ALMS1Q8TCU4 AC068538.1-201ENST00000376856 336 ntBASIC3.78□□□□□ -1.8
ALMS1Q8TCU4 LDHAP2-201ENST00000437325 985 ntBASIC3.78□□□□□ -1.8
ALMS1Q8TCU4 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC3.78□□□□□ -1.8
ALMS1Q8TCU4 AC073648.4-201ENST00000442655 781 ntBASIC3.78□□□□□ -1.8
ALMS1Q8TCU4 MTCYBP21-201ENST00000443300 1113 ntBASIC3.78□□□□□ -1.8
ALMS1Q8TCU4 AC105399.1-202ENST00000447303 205 ntBASIC3.78□□□□□ -1.8
ALMS1Q8TCU4 NUTF2P7-201ENST00000453086 375 ntBASIC3.78□□□□□ -1.8
ALMS1Q8TCU4 MOCS2-205ENST00000508922 1210 ntTSL 5 BASIC3.78□□□□□ -1.8
ALMS1Q8TCU4 AC078878.1-201ENST00000539832 958 ntBASIC3.78□□□□□ -1.8
ALMS1Q8TCU4 BLZF2P-201ENST00000553776 1130 ntBASIC3.78□□□□□ -1.8
ALMS1Q8TCU4 PWRN1-208ENST00000567647 561 ntTSL 5 BASIC3.78□□□□□ -1.8
ALMS1Q8TCU4 MOCS2-209ENST00000582677 741 ntTSL 5 BASIC3.78□□□□□ -1.8
ALMS1Q8TCU4 Metazoa_SRP.207-201ENST00000612254 285 ntBASIC3.78□□□□□ -1.8
ALMS1Q8TCU4 AC107068.2-201ENST00000634611 447 ntTSL 2 BASIC3.78□□□□□ -1.8
ALMS1Q8TCU4 CASC19-221ENST00000641309 1382 ntBASIC3.78□□□□□ -1.8
ALMS1Q8TCU4 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC3.78□□□□□ -1.8
ALMS1Q8TCU4 AC114947.2-201ENST00000565748 2125 ntBASIC3.78□□□□□ -1.8
ALMS1Q8TCU4 CDKL4-201ENST00000378803 1567 ntAPPRIS P2 TSL 1 (best) BASIC3.78□□□□□ -1.8
ALMS1Q8TCU4 CNTNAP2-203ENST00000463592 6076 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
ALMS1Q8TCU4 AL606516.1-201ENST00000455438 1861 ntTSL 2 BASIC3.78□□□□□ -1.8
ALMS1Q8TCU4 CNOT1-202ENST00000441024 4999 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
ALMS1Q8TCU4 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
ALMS1Q8TCU4 OR8D4-201ENST00000321355 1331 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
ALMS1Q8TCU4 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC3.78□□□□□ -1.8
ALMS1Q8TCU4 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC3.78□□□□□ -1.8
ALMS1Q8TCU4 IGF1R-206ENST00000558762 11726 ntAPPRIS ALT1 TSL 1 (best) BASIC3.78□□□□□ -1.8
ALMS1Q8TCU4 HEPH-209ENST00000519389 6013 ntAPPRIS P3 TSL 1 (best) BASIC3.78□□□□□ -1.8
ALMS1Q8TCU4 AP000432.2-201ENST00000624164 2048 ntBASIC3.78□□□□□ -1.8
ALMS1Q8TCU4 CPS1-IT1-201ENST00000628368 2306 ntBASIC3.78□□□□□ -1.8
ALMS1Q8TCU4 SHTN1-207ENST00000615301 6730 ntAPPRIS P3 TSL 1 (best) BASIC3.78□□□□□ -1.8
ALMS1Q8TCU4 REST-201ENST00000309042 7300 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
ALMS1Q8TCU4 MIR133B-201ENST00000362210 119 ntBASIC3.78□□□□□ -1.8
ALMS1Q8TCU4 AC019205.1-201ENST00000421830 730 ntBASIC3.78□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 72 ms