Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 OR52I1-202ENST00000530443 2961 ntAPPRIS P1 BASIC7.25□□□□□ -1.25
SHKBP1Q8TBC3 SYT4-201ENST00000255224 4110 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
SHKBP1Q8TBC3 SUPT7L-202ENST00000404798 4114 ntTSL 2 BASIC7.25□□□□□ -1.25
SHKBP1Q8TBC3 GARNL3-205ENST00000435213 3599 ntTSL 2 BASIC7.25□□□□□ -1.25
SHKBP1Q8TBC3 GART-204ENST00000381831 3490 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
SHKBP1Q8TBC3 REG1A-201ENST00000233735 808 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
SHKBP1Q8TBC3 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
SHKBP1Q8TBC3 AC010894.1-201ENST00000313760 361 ntBASIC7.25□□□□□ -1.25
SHKBP1Q8TBC3 CLEC4A-202ENST00000345999 841 ntTSL 5 BASIC7.25□□□□□ -1.25
SHKBP1Q8TBC3 DEFB121-202ENST00000376314 389 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
SHKBP1Q8TBC3 SNORA70G-201ENST00000383923 142 ntBASIC7.25□□□□□ -1.25
SHKBP1Q8TBC3 U3.28-201ENST00000391249 210 ntBASIC7.25□□□□□ -1.25
SHKBP1Q8TBC3 RSL24D1P4-201ENST00000400938 484 ntBASIC7.25□□□□□ -1.25
SHKBP1Q8TBC3 RNA5SP155-201ENST00000411154 129 ntBASIC7.25□□□□□ -1.25
SHKBP1Q8TBC3 AF274855.1-201ENST00000411474 850 ntTSL 3 BASIC7.25□□□□□ -1.25
SHKBP1Q8TBC3 AC244452.1-201ENST00000413798 141 ntBASIC7.25□□□□□ -1.25
SHKBP1Q8TBC3 NFIA-AS2-202ENST00000421455 768 ntTSL 4 BASIC7.25□□□□□ -1.25
SHKBP1Q8TBC3 TNPO1P1-201ENST00000423641 1138 ntBASIC7.25□□□□□ -1.25
SHKBP1Q8TBC3 GAPDHP34-201ENST00000432112 823 ntBASIC7.25□□□□□ -1.25
SHKBP1Q8TBC3 NANOGP2-201ENST00000435391 727 ntBASIC7.25□□□□□ -1.25
SHKBP1Q8TBC3 FGF7P5-201ENST00000441829 291 ntBASIC7.25□□□□□ -1.25
SHKBP1Q8TBC3 AC004470.1-201ENST00000442155 382 ntTSL 5 BASIC7.25□□□□□ -1.25
SHKBP1Q8TBC3 MAGEC3-203ENST00000443323 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC7.25□□□□□ -1.25
SHKBP1Q8TBC3 AC092601.1-201ENST00000444526 383 ntBASIC7.25□□□□□ -1.25
SHKBP1Q8TBC3 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC7.25□□□□□ -1.25
SHKBP1Q8TBC3 NDUFB3-204ENST00000454214 547 ntAPPRIS P1 TSL 2 BASIC7.25□□□□□ -1.25
SHKBP1Q8TBC3 HBBP1-202ENST00000454892 455 ntTSL 2 BASIC7.25□□□□□ -1.25
SHKBP1Q8TBC3 AC084754.1-201ENST00000463466 464 ntBASIC7.25□□□□□ -1.25
SHKBP1Q8TBC3 AC041039.1-201ENST00000485656 536 ntBASIC7.25□□□□□ -1.25
SHKBP1Q8TBC3 RN7SL37P-201ENST00000490461 307 ntBASIC7.25□□□□□ -1.25
SHKBP1Q8TBC3 AC015524.1-201ENST00000491585 472 ntBASIC7.25□□□□□ -1.25
SHKBP1Q8TBC3 ZNF138-207ENST00000494380 842 ntTSL 2 BASIC7.25□□□□□ -1.25
SHKBP1Q8TBC3 MTND5P5-201ENST00000503764 376 ntBASIC7.25□□□□□ -1.25
SHKBP1Q8TBC3 AC026414.1-201ENST00000504046 698 ntBASIC7.25□□□□□ -1.25
SHKBP1Q8TBC3 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC7.25□□□□□ -1.25
SHKBP1Q8TBC3 TMEM97P2-201ENST00000517841 403 ntBASIC7.25□□□□□ -1.25
SHKBP1Q8TBC3 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC7.25□□□□□ -1.25
SHKBP1Q8TBC3 BUD31P1-201ENST00000521828 359 ntBASIC7.25□□□□□ -1.25
SHKBP1Q8TBC3 AC025419.1-204ENST00000539653 745 ntTSL 3 BASIC7.25□□□□□ -1.25
SHKBP1Q8TBC3 RAB11AP2-201ENST00000545905 639 ntBASIC7.25□□□□□ -1.25
SHKBP1Q8TBC3 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC7.25□□□□□ -1.25
SHKBP1Q8TBC3 AC004217.3-201ENST00000551552 878 ntBASIC7.25□□□□□ -1.25
SHKBP1Q8TBC3 AL121579.1-201ENST00000555129 305 ntBASIC7.25□□□□□ -1.25
SHKBP1Q8TBC3 NPM1P47-201ENST00000560843 856 ntBASIC7.25□□□□□ -1.25
SHKBP1Q8TBC3 HID1-AS1-201ENST00000577295 815 ntTSL 2 BASIC7.25□□□□□ -1.25
SHKBP1Q8TBC3 AC008736.1-201ENST00000592431 568 ntTSL 2 BASIC7.25□□□□□ -1.25
SHKBP1Q8TBC3 AC098617.1-205ENST00000595918 1032 ntTSL 5 BASIC7.25□□□□□ -1.25
SHKBP1Q8TBC3 RPS11-205ENST00000599561 430 ntTSL 5 BASIC7.25□□□□□ -1.25
SHKBP1Q8TBC3 RMDN2-AS1-203ENST00000601029 613 ntTSL 5 BASIC7.25□□□□□ -1.25
SHKBP1Q8TBC3 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC7.25□□□□□ -1.25
SHKBP1Q8TBC3 AC083798.2-201ENST00000608756 1152 ntTSL 4 BASIC7.25□□□□□ -1.25
SHKBP1Q8TBC3 AC019131.2-201ENST00000609071 870 ntBASIC7.25□□□□□ -1.25
SHKBP1Q8TBC3 MIR6503-201ENST00000622884 86 ntBASIC7.25□□□□□ -1.25
SHKBP1Q8TBC3 AF246928.1-201ENST00000623768 87 ntBASIC7.25□□□□□ -1.25
SHKBP1Q8TBC3 LAMTOR5-AS1-233ENST00000625451 470 ntTSL 5 BASIC7.25□□□□□ -1.25
SHKBP1Q8TBC3 AL034408.1-201ENST00000637712 664 ntBASIC7.25□□□□□ -1.25
SHKBP1Q8TBC3 NFAT5-201ENST00000349945 13362 ntAPPRIS ALT1 TSL 1 (best) BASIC7.25□□□□□ -1.25
SHKBP1Q8TBC3 RAB9B-201ENST00000243298 3748 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
SHKBP1Q8TBC3 NRP1-205ENST00000374823 3737 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
SHKBP1Q8TBC3 ZNF763-202ENST00000358987 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC7.25□□□□□ -1.25
SHKBP1Q8TBC3 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
SHKBP1Q8TBC3 RBM25-201ENST00000261973 6910 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
SHKBP1Q8TBC3 AC112243.1-201ENST00000623949 3851 ntBASIC7.25□□□□□ -1.25
SHKBP1Q8TBC3 SLC3A1-206ENST00000409740 1418 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
SHKBP1Q8TBC3 OFD1P10Y-201ENST00000434110 1433 ntBASIC7.25□□□□□ -1.25
SHKBP1Q8TBC3 VDAC2-214ENST00000543351 1424 ntAPPRIS P1 TSL 5 BASIC7.25□□□□□ -1.25
SHKBP1Q8TBC3 GUCY2C-201ENST00000261170 3844 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
SHKBP1Q8TBC3 BMS1-201ENST00000374518 7753 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
SHKBP1Q8TBC3 PGK2-201ENST00000304801 1657 ntAPPRIS P1 BASIC7.25□□□□□ -1.25
SHKBP1Q8TBC3 CEP97-206ENST00000494050 2870 ntAPPRIS ALT2 TSL 2 BASIC7.25□□□□□ -1.25
SHKBP1Q8TBC3 SH2D1B-201ENST00000367929 2523 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
SHKBP1Q8TBC3 AQP4-205ENST00000581374 1586 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
SHKBP1Q8TBC3 TCF7L2-220ENST00000543371 4037 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
SHKBP1Q8TBC3 SIAH3-201ENST00000400405 7057 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
SHKBP1Q8TBC3 GABPB2-202ENST00000368918 8964 ntAPPRIS P3 TSL 1 (best) BASIC7.24□□□□□ -1.25
SHKBP1Q8TBC3 HEATR1-202ENST00000366581 6538 ntTSL 5 BASIC7.24□□□□□ -1.25
SHKBP1Q8TBC3 ZNF333-203ENST00000540689 3595 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
SHKBP1Q8TBC3 CTNNA1-244ENST00000627109 3831 ntTSL 5 BASIC7.24□□□□□ -1.25
SHKBP1Q8TBC3 OAS2-202ENST00000392583 4734 ntAPPRIS ALT2 TSL 1 (best) BASIC7.24□□□□□ -1.25
SHKBP1Q8TBC3 TSC1-203ENST00000440111 8463 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
SHKBP1Q8TBC3 NLGN4X-202ENST00000381092 3750 ntAPPRIS P2 TSL 2 BASIC7.24□□□□□ -1.25
SHKBP1Q8TBC3 VTCN1-201ENST00000328189 2289 ntTSL 5 BASIC7.24□□□□□ -1.25
SHKBP1Q8TBC3 ENO1P4-201ENST00000416471 1785 ntBASIC7.24□□□□□ -1.25
SHKBP1Q8TBC3 OR4K17-203ENST00000641633 5068 ntAPPRIS P1 BASIC7.24□□□□□ -1.25
SHKBP1Q8TBC3 MTCO1P28-201ENST00000574177 1528 ntBASIC7.24□□□□□ -1.25
SHKBP1Q8TBC3 RNA5SP308-201ENST00000362532 115 ntBASIC7.24□□□□□ -1.25
SHKBP1Q8TBC3 MCTS1-202ENST00000371317 1018 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
SHKBP1Q8TBC3 XGY1-201ENST00000381172 446 ntBASIC7.24□□□□□ -1.25
SHKBP1Q8TBC3 RNU6-114P-201ENST00000384704 105 ntBASIC7.24□□□□□ -1.25
SHKBP1Q8TBC3 CHMP1B2P-201ENST00000399581 597 ntBASIC7.24□□□□□ -1.25
SHKBP1Q8TBC3 AL353651.1-201ENST00000415629 355 ntTSL 5 BASIC7.24□□□□□ -1.25
SHKBP1Q8TBC3 RPL17P17-201ENST00000419491 557 ntBASIC7.24□□□□□ -1.25
SHKBP1Q8TBC3 AL022100.2-201ENST00000422548 389 ntTSL 3 BASIC7.24□□□□□ -1.25
SHKBP1Q8TBC3 DEFB130D-201ENST00000426866 237 ntBASIC7.24□□□□□ -1.25
SHKBP1Q8TBC3 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC7.24□□□□□ -1.25
SHKBP1Q8TBC3 USP9YP31-201ENST00000431405 881 ntBASIC7.24□□□□□ -1.25
SHKBP1Q8TBC3 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC7.24□□□□□ -1.25
SHKBP1Q8TBC3 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC7.24□□□□□ -1.25
SHKBP1Q8TBC3 AL162385.2-201ENST00000437864 285 ntTSL 3 BASIC7.24□□□□□ -1.25
SHKBP1Q8TBC3 AL445623.1-201ENST00000440888 237 ntTSL 3 BASIC7.24□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 75 ms