Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 METTL15-211ENST00000634762 718 ntTSL 5 BASIC6.77□□□□□ -1.33
SYNPOQ8N3V7 PSD3-218ENST00000523619 8145 ntAPPRIS ALT2 TSL 1 (best) BASIC6.77□□□□□ -1.33
SYNPOQ8N3V7 SNX25-202ENST00000504273 3323 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
SYNPOQ8N3V7 ZNF562-202ENST00000453372 2111 ntAPPRIS P3 TSL 3 BASIC6.77□□□□□ -1.33
SYNPOQ8N3V7 SORBS2-230ENST00000448662 4356 ntTSL 2 BASIC6.77□□□□□ -1.33
SYNPOQ8N3V7 ANKRD44-201ENST00000282272 5147 ntAPPRIS P1 TSL 5 BASIC6.77□□□□□ -1.33
SYNPOQ8N3V7 VCAN-202ENST00000342785 7154 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
SYNPOQ8N3V7 MME-203ENST00000460393 5622 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
SYNPOQ8N3V7 MAPK10-383ENST00000642032 3390 ntBASIC6.77□□□□□ -1.33
SYNPOQ8N3V7 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC6.76□□□□□ -1.33
SYNPOQ8N3V7 LEO1-201ENST00000299601 2193 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
SYNPOQ8N3V7 TRMT13-202ENST00000370141 3129 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
SYNPOQ8N3V7 PI15-202ENST00000523773 1413 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
SYNPOQ8N3V7 AC005702.3-201ENST00000585345 1447 ntBASIC6.76□□□□□ -1.33
SYNPOQ8N3V7 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC6.76□□□□□ -1.33
SYNPOQ8N3V7 AL031651.1-201ENST00000615357 1438 ntBASIC6.76□□□□□ -1.33
SYNPOQ8N3V7 AKAP5-202ENST00000394718 6487 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
SYNPOQ8N3V7 ZNF268-201ENST00000228289 3543 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
SYNPOQ8N3V7 TESPA1-210ENST00000531122 1517 ntAPPRIS ALT2 TSL 2 BASIC6.76□□□□□ -1.33
SYNPOQ8N3V7 ANK2-215ENST00000509550 3638 ntTSL 2 BASIC6.76□□□□□ -1.33
SYNPOQ8N3V7 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC6.76□□□□□ -1.33
SYNPOQ8N3V7 RAG1-201ENST00000299440 6564 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
SYNPOQ8N3V7 LRP2BP-202ENST00000505916 2302 ntAPPRIS P1 TSL 2 BASIC6.76□□□□□ -1.33
SYNPOQ8N3V7 PROM1-219ENST00000539194 3884 ntAPPRIS ALT2 TSL 5 BASIC6.76□□□□□ -1.33
SYNPOQ8N3V7 AC007993.1-201ENST00000621298 2430 ntBASIC6.76□□□□□ -1.33
SYNPOQ8N3V7 SPRY3-201ENST00000302805 9019 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
SYNPOQ8N3V7 OR2T2-203ENST00000642130 3331 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
SYNPOQ8N3V7 LINC01968-202ENST00000423318 3647 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
SYNPOQ8N3V7 SPATA9-201ENST00000274432 1100 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
SYNPOQ8N3V7 RPL12P13-201ENST00000310055 497 ntBASIC6.76□□□□□ -1.33
SYNPOQ8N3V7 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
SYNPOQ8N3V7 OR6X1-201ENST00000327930 1058 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
SYNPOQ8N3V7 TSLP-201ENST00000344895 736 ntAPPRIS P2 TSL 1 (best) BASIC6.76□□□□□ -1.33
SYNPOQ8N3V7 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
SYNPOQ8N3V7 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC6.76□□□□□ -1.33
SYNPOQ8N3V7 SNORD65C-201ENST00000390962 71 ntBASIC6.76□□□□□ -1.33
SYNPOQ8N3V7 AL021331.1-201ENST00000402817 582 ntBASIC6.76□□□□□ -1.33
SYNPOQ8N3V7 AL359922.1-201ENST00000404796 935 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
SYNPOQ8N3V7 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC6.76□□□□□ -1.33
SYNPOQ8N3V7 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC6.76□□□□□ -1.33
SYNPOQ8N3V7 VTA1P1-201ENST00000414044 866 ntBASIC6.76□□□□□ -1.33
SYNPOQ8N3V7 LINC01980-201ENST00000414382 543 ntTSL 4 BASIC6.76□□□□□ -1.33
SYNPOQ8N3V7 OXSM-202ENST00000420173 1256 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
SYNPOQ8N3V7 SLC9B1P4-201ENST00000421957 1288 ntBASIC6.76□□□□□ -1.33
SYNPOQ8N3V7 RPS7P12-201ENST00000422385 582 ntBASIC6.76□□□□□ -1.33
SYNPOQ8N3V7 AC239367.3-201ENST00000428996 814 ntBASIC6.76□□□□□ -1.33
SYNPOQ8N3V7 AC005008.2-201ENST00000431501 715 ntTSL 3 BASIC6.76□□□□□ -1.33
SYNPOQ8N3V7 AC019117.1-202ENST00000439046 589 ntTSL 3 BASIC6.76□□□□□ -1.33
SYNPOQ8N3V7 NANOGP9-201ENST00000439890 892 ntBASIC6.76□□□□□ -1.33
SYNPOQ8N3V7 OR2L9P-201ENST00000444456 913 ntBASIC6.76□□□□□ -1.33
SYNPOQ8N3V7 Z73417.1-201ENST00000447373 778 ntBASIC6.76□□□□□ -1.33
SYNPOQ8N3V7 MRPL35P2-201ENST00000448009 511 ntBASIC6.76□□□□□ -1.33
SYNPOQ8N3V7 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC6.76□□□□□ -1.33
SYNPOQ8N3V7 AC018638.3-201ENST00000461273 132 ntBASIC6.76□□□□□ -1.33
SYNPOQ8N3V7 AC135721.2-201ENST00000464237 300 ntBASIC6.76□□□□□ -1.33
SYNPOQ8N3V7 AL157777.1-201ENST00000468100 304 ntBASIC6.76□□□□□ -1.33
SYNPOQ8N3V7 CREM-242ENST00000490511 469 ntTSL 2 BASIC6.76□□□□□ -1.33
SYNPOQ8N3V7 AC098859.2-201ENST00000506232 563 ntTSL 4 BASIC6.76□□□□□ -1.33
SYNPOQ8N3V7 AC095057.1-201ENST00000507583 168 ntBASIC6.76□□□□□ -1.33
SYNPOQ8N3V7 AC106800.2-201ENST00000514009 1103 ntBASIC6.76□□□□□ -1.33
SYNPOQ8N3V7 AC091987.1-201ENST00000517758 464 ntTSL 3 BASIC6.76□□□□□ -1.33
SYNPOQ8N3V7 AC018442.2-201ENST00000523658 648 ntTSL 3 BASIC6.76□□□□□ -1.33
SYNPOQ8N3V7 UBTFL10-201ENST00000528532 562 ntBASIC6.76□□□□□ -1.33
SYNPOQ8N3V7 LINC01493-201ENST00000530102 460 ntTSL 5 BASIC6.76□□□□□ -1.33
SYNPOQ8N3V7 AC002056.2-201ENST00000532913 284 ntTSL 5 BASIC6.76□□□□□ -1.33
SYNPOQ8N3V7 AC022075.2-201ENST00000535911 562 ntTSL 4 BASIC6.76□□□□□ -1.33
SYNPOQ8N3V7 AC025260.1-201ENST00000548858 430 ntBASIC6.76□□□□□ -1.33
SYNPOQ8N3V7 AC012555.2-201ENST00000549448 413 ntTSL 3 BASIC6.76□□□□□ -1.33
SYNPOQ8N3V7 TMEM106C-215ENST00000550552 776 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
SYNPOQ8N3V7 AC090502.3-201ENST00000552046 529 ntTSL 3 BASIC6.76□□□□□ -1.33
SYNPOQ8N3V7 GPATCH2L-203ENST00000553588 776 ntTSL 2 BASIC6.76□□□□□ -1.33
SYNPOQ8N3V7 AC087286.3-201ENST00000561409 953 ntTSL 3 BASIC6.76□□□□□ -1.33
SYNPOQ8N3V7 AC007496.2-201ENST00000564801 547 ntTSL 4 BASIC6.76□□□□□ -1.33
SYNPOQ8N3V7 CYP2C60P-201ENST00000566088 139 ntBASIC6.76□□□□□ -1.33
SYNPOQ8N3V7 AC139099.3-202ENST00000574856 439 ntTSL 2 BASIC6.76□□□□□ -1.33
SYNPOQ8N3V7 RN7SL404P-201ENST00000582421 281 ntBASIC6.76□□□□□ -1.33
SYNPOQ8N3V7 LINC01906-201ENST00000582962 499 ntTSL 4 BASIC6.76□□□□□ -1.33
SYNPOQ8N3V7 ZNF682-208ENST00000596019 552 ntTSL 5 BASIC6.76□□□□□ -1.33
SYNPOQ8N3V7 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC6.76□□□□□ -1.33
SYNPOQ8N3V7 AC004805.3-201ENST00000603178 310 ntBASIC6.76□□□□□ -1.33
SYNPOQ8N3V7 AL356274.1-201ENST00000617064 410 ntBASIC6.76□□□□□ -1.33
SYNPOQ8N3V7 AC013470.4-201ENST00000619978 986 ntBASIC6.76□□□□□ -1.33
SYNPOQ8N3V7 MIR6811-201ENST00000620409 58 ntBASIC6.76□□□□□ -1.33
SYNPOQ8N3V7 AC096708.4-201ENST00000620563 552 ntBASIC6.76□□□□□ -1.33
SYNPOQ8N3V7 AC034229.6-201ENST00000623704 224 ntBASIC6.76□□□□□ -1.33
SYNPOQ8N3V7 AC138907.10-201ENST00000623708 983 ntBASIC6.76□□□□□ -1.33
SYNPOQ8N3V7 AL450990.1-201ENST00000632868 582 ntTSL 4 BASIC6.76□□□□□ -1.33
SYNPOQ8N3V7 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
SYNPOQ8N3V7 ROR1-AS1-201ENST00000412349 1574 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
SYNPOQ8N3V7 RALYL-211ENST00000523850 1684 ntTSL 2 BASIC6.76□□□□□ -1.33
SYNPOQ8N3V7 THSD7B-202ENST00000409968 6111 ntAPPRIS P2 TSL 5 BASIC6.76□□□□□ -1.33
SYNPOQ8N3V7 PLXNA4-201ENST00000321063 13061 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
SYNPOQ8N3V7 CYB5B-201ENST00000307892 4286 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
SYNPOQ8N3V7 Z97989.1-201ENST00000531702 2421 ntBASIC6.76□□□□□ -1.33
SYNPOQ8N3V7 CLTC-210ENST00000579456 2301 ntTSL 5 BASIC6.76□□□□□ -1.33
SYNPOQ8N3V7 LINC01903-201ENST00000580659 2149 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
SYNPOQ8N3V7 CREM-202ENST00000342105 1541 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
SYNPOQ8N3V7 CIR1P2-201ENST00000514821 1342 ntBASIC6.76□□□□□ -1.33
SYNPOQ8N3V7 CACNA2D3-212ENST00000620722 3296 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
SYNPOQ8N3V7 MLH3-202ENST00000380968 7819 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 87.3 ms