Protein–RNA interactions for Protein: P78556

CCL20, C-C motif chemokine 20, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL20P78556 FAP-203ENST00000443424 2598 ntTSL 2 BASIC4.39□□□□□ -1.71
CCL20P78556 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
CCL20P78556 EIF1AY-201ENST00000361365 1390 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
CCL20P78556 AC012078.1-201ENST00000405035 1646 ntBASIC4.39□□□□□ -1.71
CCL20P78556 AP001642.1-201ENST00000624727 2117 ntBASIC4.39□□□□□ -1.71
CCL20P78556 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
CCL20P78556 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
CCL20P78556 HAUS3-201ENST00000243706 5620 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
CCL20P78556 AC068870.3-201ENST00000625077 2536 ntBASIC4.38□□□□□ -1.71
CCL20P78556 Z83820.1-201ENST00000456978 1499 ntBASIC4.38□□□□□ -1.71
CCL20P78556 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC4.38□□□□□ -1.71
CCL20P78556 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
CCL20P78556 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
CCL20P78556 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
CCL20P78556 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC4.38□□□□□ -1.71
CCL20P78556 CRYGS-201ENST00000307944 759 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
CCL20P78556 OR4N2-201ENST00000315947 924 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
CCL20P78556 HBG1-201ENST00000330597 808 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
CCL20P78556 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
CCL20P78556 GAS5-202ENST00000414075 413 ntTSL 2 BASIC4.38□□□□□ -1.71
CCL20P78556 LINC02246-202ENST00000418954 717 ntTSL 2 BASIC4.38□□□□□ -1.71
CCL20P78556 C9orf57-202ENST00000424431 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
CCL20P78556 RIMKLBP2-201ENST00000424737 654 ntBASIC4.38□□□□□ -1.71
CCL20P78556 AC016772.1-201ENST00000444170 1261 ntBASIC4.38□□□□□ -1.71
CCL20P78556 AL049649.1-201ENST00000444792 1105 ntTSL 5 BASIC4.38□□□□□ -1.71
CCL20P78556 AC073909.1-201ENST00000447112 999 ntBASIC4.38□□□□□ -1.71
CCL20P78556 AC009518.1-201ENST00000452219 559 ntTSL 4 BASIC4.38□□□□□ -1.71
CCL20P78556 RPS23P2-201ENST00000463671 415 ntBASIC4.38□□□□□ -1.71
CCL20P78556 AC104411.1-201ENST00000480817 320 ntTSL 3 BASIC4.38□□□□□ -1.71
CCL20P78556 RN7SL273P-201ENST00000481561 299 ntBASIC4.38□□□□□ -1.71
CCL20P78556 LINC00518-204ENST00000491317 1228 ntTSL 2 BASIC4.38□□□□□ -1.71
CCL20P78556 AC097460.2-201ENST00000511857 741 ntBASIC4.38□□□□□ -1.71
CCL20P78556 HMGN1P9-201ENST00000515212 298 ntBASIC4.38□□□□□ -1.71
CCL20P78556 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC4.38□□□□□ -1.71
CCL20P78556 AC083967.1-201ENST00000522354 515 ntTSL 3 BASIC4.38□□□□□ -1.71
CCL20P78556 OR9G2P-201ENST00000533326 880 ntBASIC4.38□□□□□ -1.71
CCL20P78556 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC4.38□□□□□ -1.71
CCL20P78556 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC4.38□□□□□ -1.71
CCL20P78556 AL121790.1-201ENST00000554829 738 ntTSL 3 BASIC4.38□□□□□ -1.71
CCL20P78556 LINC01579-205ENST00000556447 791 ntTSL 4 BASIC4.38□□□□□ -1.71
CCL20P78556 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC4.38□□□□□ -1.71
CCL20P78556 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC4.38□□□□□ -1.71
CCL20P78556 LINC01533-201ENST00000585739 616 ntTSL 5 BASIC4.38□□□□□ -1.71
CCL20P78556 Metazoa_SRP.66-201ENST00000615609 282 ntBASIC4.38□□□□□ -1.71
CCL20P78556 AP001962.1-201ENST00000624114 559 ntBASIC4.38□□□□□ -1.71
CCL20P78556 AL161457.2-201ENST00000629181 630 ntTSL 5 BASIC4.38□□□□□ -1.71
CCL20P78556 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC4.38□□□□□ -1.71
CCL20P78556 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
CCL20P78556 ERVFRD-3-201ENST00000578561 1617 ntBASIC4.38□□□□□ -1.71
CCL20P78556 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC4.38□□□□□ -1.71
CCL20P78556 AP005432.1-201ENST00000580891 3485 ntBASIC4.38□□□□□ -1.71
CCL20P78556 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC4.38□□□□□ -1.71
CCL20P78556 CASC19-248ENST00000641674 1356 ntBASIC4.38□□□□□ -1.71
CCL20P78556 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC4.38□□□□□ -1.71
CCL20P78556 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
CCL20P78556 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC4.38□□□□□ -1.71
CCL20P78556 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC4.38□□□□□ -1.71
CCL20P78556 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
CCL20P78556 AC097063.1-201ENST00000426714 1797 ntBASIC4.37□□□□□ -1.71
CCL20P78556 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC4.37□□□□□ -1.71
CCL20P78556 ZNF415-203ENST00000500065 2496 ntAPPRIS ALT2 TSL 4 BASIC4.37□□□□□ -1.71
CCL20P78556 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
CCL20P78556 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
CCL20P78556 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
CCL20P78556 AL022322.2-201ENST00000624072 20397 ntBASIC4.37□□□□□ -1.71
CCL20P78556 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC4.37□□□□□ -1.71
CCL20P78556 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
CCL20P78556 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC4.37□□□□□ -1.71
CCL20P78556 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC4.37□□□□□ -1.71
CCL20P78556 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
CCL20P78556 TET1P1-201ENST00000426627 2301 ntBASIC4.37□□□□□ -1.71
CCL20P78556 AC068775.1-202ENST00000538173 1602 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
CCL20P78556 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
CCL20P78556 OR7D4-201ENST00000308682 1022 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
CCL20P78556 SELENOWP1-201ENST00000322792 252 ntBASIC4.37□□□□□ -1.71
CCL20P78556 SNORA21-201ENST00000362423 132 ntBASIC4.37□□□□□ -1.71
CCL20P78556 TRMT13-203ENST00000370143 476 ntTSL 3 BASIC4.37□□□□□ -1.71
CCL20P78556 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
CCL20P78556 UBBP2-201ENST00000376781 231 ntBASIC4.37□□□□□ -1.71
CCL20P78556 IFNB1-201ENST00000380232 859 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
CCL20P78556 TRAV22-201ENST00000390450 464 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
CCL20P78556 RNA5SP155-201ENST00000411154 129 ntBASIC4.37□□□□□ -1.71
CCL20P78556 AC010082.1-201ENST00000411797 546 ntTSL 2 BASIC4.37□□□□□ -1.71
CCL20P78556 RPSAP35-201ENST00000413753 818 ntBASIC4.37□□□□□ -1.71
CCL20P78556 AC019205.1-201ENST00000421830 730 ntBASIC4.37□□□□□ -1.71
CCL20P78556 AL672212.1-201ENST00000422246 400 ntBASIC4.37□□□□□ -1.71
CCL20P78556 GPN3P1-201ENST00000423883 535 ntBASIC4.37□□□□□ -1.71
CCL20P78556 QKI-206ENST00000424802 954 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
CCL20P78556 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC4.37□□□□□ -1.71
CCL20P78556 LINC01506-201ENST00000432148 495 ntTSL 2 BASIC4.37□□□□□ -1.71
CCL20P78556 EIF5AP4-201ENST00000441206 465 ntBASIC4.37□□□□□ -1.71
CCL20P78556 TRIM60P16-201ENST00000444048 694 ntBASIC4.37□□□□□ -1.71
CCL20P78556 AC079117.1-201ENST00000445178 1000 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
CCL20P78556 IGBP1P3-201ENST00000447449 1000 ntBASIC4.37□□□□□ -1.71
CCL20P78556 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC4.37□□□□□ -1.71
CCL20P78556 MIR205HG-209ENST00000458250 406 ntTSL 3 BASIC4.37□□□□□ -1.71
CCL20P78556 GLYCTK-AS1-202ENST00000472761 109 ntTSL 5 BASIC4.37□□□□□ -1.71
CCL20P78556 AC114956.3-202ENST00000505645 482 ntTSL 5 BASIC4.37□□□□□ -1.71
CCL20P78556 SNX18P25-201ENST00000510539 758 ntBASIC4.37□□□□□ -1.71
CCL20P78556 IMPA1P1-201ENST00000510718 842 ntBASIC4.37□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 104.7 ms