Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 COPS7B-225ENST00000631349 189 ntTSL 5 BASIC5.09□□□□□ -1.59
UBA52P62987 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
UBA52P62987 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
UBA52P62987 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
UBA52P62987 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
UBA52P62987 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
UBA52P62987 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
UBA52P62987 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC5.09□□□□□ -1.6
UBA52P62987 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC5.09□□□□□ -1.6
UBA52P62987 AP001541.1-201ENST00000623322 1904 ntBASIC5.09□□□□□ -1.6
UBA52P62987 TXNRD1-212ENST00000526390 3808 ntTSL 5 BASIC5.09□□□□□ -1.6
UBA52P62987 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC5.09□□□□□ -1.6
UBA52P62987 IFI16-204ENST00000368131 2734 ntAPPRIS P3 TSL 1 (best) BASIC5.09□□□□□ -1.6
UBA52P62987 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.6
UBA52P62987 MOCS2-201ENST00000361377 3568 ntTSL 4 BASIC5.09□□□□□ -1.6
UBA52P62987 FAM114A2-201ENST00000351797 4443 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
UBA52P62987 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC5.08□□□□□ -1.6
UBA52P62987 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
UBA52P62987 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
UBA52P62987 CASC19-238ENST00000641523 1558 ntBASIC5.08□□□□□ -1.6
UBA52P62987 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
UBA52P62987 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
UBA52P62987 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC5.08□□□□□ -1.6
UBA52P62987 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
UBA52P62987 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
UBA52P62987 PHACTR2P1-201ENST00000605639 1414 ntBASIC5.08□□□□□ -1.6
UBA52P62987 AC005261.6-201ENST00000623072 1387 ntBASIC5.08□□□□□ -1.6
UBA52P62987 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC5.08□□□□□ -1.6
UBA52P62987 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
UBA52P62987 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
UBA52P62987 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
UBA52P62987 ZNF214-204ENST00000536068 2562 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
UBA52P62987 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
UBA52P62987 OR10A2-201ENST00000307322 1053 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
UBA52P62987 RN7SKP185-201ENST00000362813 326 ntBASIC5.08□□□□□ -1.6
UBA52P62987 RN7SKP145-201ENST00000363291 303 ntBASIC5.08□□□□□ -1.6
UBA52P62987 AC016769.2-201ENST00000414815 475 ntBASIC5.08□□□□□ -1.6
UBA52P62987 AL121878.1-201ENST00000418638 859 ntBASIC5.08□□□□□ -1.6
UBA52P62987 AL158817.1-201ENST00000422310 933 ntTSL 3 BASIC5.08□□□□□ -1.6
UBA52P62987 KRTAP2-5P-201ENST00000446109 396 ntBASIC5.08□□□□□ -1.6
UBA52P62987 RPL31P15-201ENST00000449770 338 ntBASIC5.08□□□□□ -1.6
UBA52P62987 AL162739.1-201ENST00000450606 307 ntBASIC5.08□□□□□ -1.6
UBA52P62987 RAB28P2-201ENST00000454299 641 ntBASIC5.08□□□□□ -1.6
UBA52P62987 AL133351.3-201ENST00000454998 193 ntBASIC5.08□□□□□ -1.6
UBA52P62987 VPS25P1-201ENST00000455691 508 ntBASIC5.08□□□□□ -1.6
UBA52P62987 PPIAP19-201ENST00000486414 492 ntBASIC5.08□□□□□ -1.6
UBA52P62987 RN7SL714P-201ENST00000487050 298 ntBASIC5.08□□□□□ -1.6
UBA52P62987 RPSAP51-201ENST00000497462 645 ntBASIC5.08□□□□□ -1.6
UBA52P62987 AL158068.1-201ENST00000506116 616 ntBASIC5.08□□□□□ -1.6
UBA52P62987 RNA5SP230-201ENST00000517039 122 ntBASIC5.08□□□□□ -1.6
UBA52P62987 RPA2P3-201ENST00000533268 770 ntBASIC5.08□□□□□ -1.6
UBA52P62987 AC084824.2-201ENST00000548906 345 ntBASIC5.08□□□□□ -1.6
UBA52P62987 AC244502.3-201ENST00000555460 457 ntTSL 3 BASIC5.08□□□□□ -1.6
UBA52P62987 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC5.08□□□□□ -1.6
UBA52P62987 AP000842.3-201ENST00000564354 808 ntTSL 3 BASIC5.08□□□□□ -1.6
UBA52P62987 NPIPB1P-202ENST00000588786 828 ntBASIC5.08□□□□□ -1.6
UBA52P62987 TEX41-218ENST00000596540 882 ntTSL 5 BASIC5.08□□□□□ -1.6
UBA52P62987 AC109309.2-201ENST00000612597 332 ntBASIC5.08□□□□□ -1.6
UBA52P62987 MIR6886-201ENST00000619864 61 ntBASIC5.08□□□□□ -1.6
UBA52P62987 PSMD10P2-203ENST00000627340 914 ntTSL 5 BASIC5.08□□□□□ -1.6
UBA52P62987 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC5.08□□□□□ -1.6
UBA52P62987 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
UBA52P62987 ZNF528-201ENST00000360465 3978 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
UBA52P62987 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC5.08□□□□□ -1.6
UBA52P62987 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
UBA52P62987 CAMSAP2-201ENST00000236925 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
UBA52P62987 AC005224.3-201ENST00000584683 2140 ntBASIC5.08□□□□□ -1.6
UBA52P62987 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC5.08□□□□□ -1.6
UBA52P62987 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC5.07□□□□□ -1.6
UBA52P62987 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC5.07□□□□□ -1.6
UBA52P62987 KIF27-204ENST00000413982 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
UBA52P62987 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
UBA52P62987 HHLA2-206ENST00000467761 2379 ntAPPRIS P3 TSL 5 BASIC5.07□□□□□ -1.6
UBA52P62987 ADGRL2-202ENST00000359929 4674 ntAPPRIS P2 TSL 1 (best) BASIC5.07□□□□□ -1.6
UBA52P62987 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
UBA52P62987 LINC00707-201ENST00000436383 3070 ntTSL 2 BASIC5.07□□□□□ -1.6
UBA52P62987 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC5.07□□□□□ -1.6
UBA52P62987 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
UBA52P62987 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
UBA52P62987 OR2B6-201ENST00000244623 942 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
UBA52P62987 RNA5SP346-201ENST00000363541 121 ntBASIC5.07□□□□□ -1.6
UBA52P62987 AL355300.1-201ENST00000412439 187 ntTSL 3 BASIC5.07□□□□□ -1.6
UBA52P62987 CDY17P-201ENST00000414121 1282 ntBASIC5.07□□□□□ -1.6
UBA52P62987 MED4-AS1-201ENST00000422483 542 ntTSL 2 BASIC5.07□□□□□ -1.6
UBA52P62987 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC5.07□□□□□ -1.6
UBA52P62987 AC130360.1-201ENST00000425489 1117 ntBASIC5.07□□□□□ -1.6
UBA52P62987 CDY8P-201ENST00000428380 1279 ntBASIC5.07□□□□□ -1.6
UBA52P62987 AC004870.2-201ENST00000445615 831 ntTSL 3 BASIC5.07□□□□□ -1.6
UBA52P62987 CDY20P-201ENST00000447528 1279 ntBASIC5.07□□□□□ -1.6
UBA52P62987 ACA64.1-201ENST00000459171 127 ntBASIC5.07□□□□□ -1.6
UBA52P62987 AC074386.1-201ENST00000476560 767 ntBASIC5.07□□□□□ -1.6
UBA52P62987 HAND2-AS1-233ENST00000515345 797 ntTSL 3 BASIC5.07□□□□□ -1.6
UBA52P62987 RN7SKP238-201ENST00000516483 249 ntBASIC5.07□□□□□ -1.6
UBA52P62987 RNA5SP271-201ENST00000516700 88 ntBASIC5.07□□□□□ -1.6
UBA52P62987 RNA5SP340-201ENST00000517132 107 ntBASIC5.07□□□□□ -1.6
UBA52P62987 LINC00967-201ENST00000517689 792 ntTSL 5 BASIC5.07□□□□□ -1.6
UBA52P62987 AC022826.1-201ENST00000519383 805 ntBASIC5.07□□□□□ -1.6
UBA52P62987 AC008601.1-201ENST00000519892 527 ntTSL 4 BASIC5.07□□□□□ -1.6
UBA52P62987 AC130365.2-201ENST00000525882 1201 ntBASIC5.07□□□□□ -1.6
UBA52P62987 AP003396.4-201ENST00000527574 265 ntBASIC5.07□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 116 ms