Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
SSR1P43307 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
SSR1P43307 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
SSR1P43307 LZTFL1-201ENST00000296135 4073 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
SSR1P43307 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
SSR1P43307 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
SSR1P43307 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
SSR1P43307 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
SSR1P43307 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
SSR1P43307 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
SSR1P43307 H3F3A-201ENST00000366813 1308 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
SSR1P43307 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC6.28□□□□□ -1.4
SSR1P43307 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC6.28□□□□□ -1.4
SSR1P43307 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC6.28□□□□□ -1.4
SSR1P43307 OR6N2-202ENST00000641131 3455 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
SSR1P43307 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
SSR1P43307 RBPJP7-201ENST00000442803 1447 ntBASIC6.28□□□□□ -1.4
SSR1P43307 RBPJP5-201ENST00000449433 1447 ntBASIC6.28□□□□□ -1.4
SSR1P43307 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC6.28□□□□□ -1.4
SSR1P43307 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
SSR1P43307 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
SSR1P43307 CRYGS-201ENST00000307944 759 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
SSR1P43307 TERB2-201ENST00000340827 1281 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
SSR1P43307 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
SSR1P43307 RPA3-204ENST00000406109 434 ntTSL 3 BASIC6.28□□□□□ -1.4
SSR1P43307 MYL6P5-201ENST00000412707 459 ntBASIC6.28□□□□□ -1.4
SSR1P43307 RANP7-201ENST00000418085 644 ntBASIC6.28□□□□□ -1.4
SSR1P43307 AF064858.3-201ENST00000419664 509 ntTSL 5 BASIC6.28□□□□□ -1.4
SSR1P43307 AC130360.1-201ENST00000425489 1117 ntBASIC6.28□□□□□ -1.4
SSR1P43307 ZEB2-AS1-203ENST00000428623 436 ntTSL 2 BASIC6.28□□□□□ -1.4
SSR1P43307 AC108479.1-201ENST00000431142 427 ntBASIC6.28□□□□□ -1.4
SSR1P43307 FTLP8-201ENST00000446770 267 ntBASIC6.28□□□□□ -1.4
SSR1P43307 RN7SL515P-201ENST00000463999 297 ntBASIC6.28□□□□□ -1.4
SSR1P43307 AC104411.1-201ENST00000480817 320 ntTSL 3 BASIC6.28□□□□□ -1.4
SSR1P43307 RPL7AP10-201ENST00000481016 791 ntBASIC6.28□□□□□ -1.4
SSR1P43307 AC130365.2-201ENST00000525882 1201 ntBASIC6.28□□□□□ -1.4
SSR1P43307 OLR1-209ENST00000543993 822 ntTSL 2 BASIC6.28□□□□□ -1.4
SSR1P43307 LINC02412-201ENST00000552584 1269 ntTSL 5 BASIC6.28□□□□□ -1.4
SSR1P43307 LINC01580-202ENST00000555364 661 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
SSR1P43307 LINC01579-205ENST00000556447 791 ntTSL 4 BASIC6.28□□□□□ -1.4
SSR1P43307 AL049779.3-201ENST00000557141 606 ntBASIC6.28□□□□□ -1.4
SSR1P43307 RORA-AS2-202ENST00000561413 576 ntTSL 4 BASIC6.28□□□□□ -1.4
SSR1P43307 AL078601.3-201ENST00000573303 535 ntBASIC6.28□□□□□ -1.4
SSR1P43307 AC119403.2-201ENST00000590960 598 ntBASIC6.28□□□□□ -1.4
SSR1P43307 Z98949.1-228ENST00000595093 798 ntTSL 5 BASIC6.28□□□□□ -1.4
SSR1P43307 AC091769.2-201ENST00000605385 479 ntTSL 4 BASIC6.28□□□□□ -1.4
SSR1P43307 uc_338.29-201ENST00000615099 168 ntBASIC6.28□□□□□ -1.4
SSR1P43307 AC096861.1-201ENST00000616652 240 ntBASIC6.28□□□□□ -1.4
SSR1P43307 AC073488.6-201ENST00000632293 754 ntBASIC6.28□□□□□ -1.4
SSR1P43307 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
SSR1P43307 USP40-202ENST00000409945 1946 ntTSL 2 BASIC6.28□□□□□ -1.4
SSR1P43307 STX3-208ENST00000641815 3236 ntBASIC6.28□□□□□ -1.4
SSR1P43307 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
SSR1P43307 C2CD6-201ENST00000286195 2104 ntAPPRIS P3 TSL 1 (best) BASIC6.28□□□□□ -1.4
SSR1P43307 AL360270.2-201ENST00000562952 5985 ntBASIC6.28□□□□□ -1.4
SSR1P43307 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC6.27□□□□□ -1.41
SSR1P43307 XKRY2-202ENST00000623874 1581 ntBASIC6.27□□□□□ -1.41
SSR1P43307 XKRY-202ENST00000624960 1581 ntBASIC6.27□□□□□ -1.41
SSR1P43307 RPS2P45-201ENST00000469997 2057 ntBASIC6.27□□□□□ -1.41
SSR1P43307 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC6.27□□□□□ -1.41
SSR1P43307 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
SSR1P43307 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
SSR1P43307 PDZRN4-203ENST00000539469 3041 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
SSR1P43307 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
SSR1P43307 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC6.27□□□□□ -1.41
SSR1P43307 UGT2A1-206ENST00000514019 2376 ntTSL 2 BASIC6.27□□□□□ -1.41
SSR1P43307 RNA5SP453-201ENST00000362503 119 ntBASIC6.27□□□□□ -1.41
SSR1P43307 RNA5SP110-201ENST00000362638 115 ntBASIC6.27□□□□□ -1.41
SSR1P43307 BMS1P3-201ENST00000372011 932 ntBASIC6.27□□□□□ -1.41
SSR1P43307 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC6.27□□□□□ -1.41
SSR1P43307 EEF1A1P29-201ENST00000416082 1096 ntBASIC6.27□□□□□ -1.41
SSR1P43307 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC6.27□□□□□ -1.41
SSR1P43307 AL035604.1-201ENST00000416481 531 ntTSL 3 BASIC6.27□□□□□ -1.41
SSR1P43307 AL160163.1-201ENST00000417465 403 ntTSL 3 BASIC6.27□□□□□ -1.41
SSR1P43307 MS4A6A-202ENST00000420732 863 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
SSR1P43307 AC096669.1-201ENST00000422203 648 ntTSL 5 BASIC6.27□□□□□ -1.41
SSR1P43307 AL121885.3-201ENST00000422833 115 ntTSL 3 BASIC6.27□□□□□ -1.41
SSR1P43307 DPYD-IT1-201ENST00000424982 401 ntTSL 3 BASIC6.27□□□□□ -1.41
SSR1P43307 UBE2V2P4-201ENST00000447495 259 ntBASIC6.27□□□□□ -1.41
SSR1P43307 LINC01809-201ENST00000448431 303 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
SSR1P43307 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
SSR1P43307 SDC4P-201ENST00000453285 601 ntBASIC6.27□□□□□ -1.41
SSR1P43307 AC104164.1-201ENST00000460282 590 ntBASIC6.27□□□□□ -1.41
SSR1P43307 RPL12P24-201ENST00000474907 486 ntBASIC6.27□□□□□ -1.41
SSR1P43307 RN7SL612P-201ENST00000497704 295 ntBASIC6.27□□□□□ -1.41
SSR1P43307 RN7SL284P-201ENST00000498823 275 ntBASIC6.27□□□□□ -1.41
SSR1P43307 AC104779.1-201ENST00000503557 441 ntTSL 3 BASIC6.27□□□□□ -1.41
SSR1P43307 LGALS8-217ENST00000525042 903 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
SSR1P43307 KCTD21-AS1-203ENST00000527321 586 ntTSL 3 BASIC6.27□□□□□ -1.41
SSR1P43307 AC022075.3-201ENST00000539009 649 ntTSL 3 BASIC6.27□□□□□ -1.41
SSR1P43307 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC6.27□□□□□ -1.41
SSR1P43307 LINC01999-201ENST00000592917 646 ntTSL 2 BASIC6.27□□□□□ -1.41
SSR1P43307 CT45A1-201ENST00000594117 1087 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
SSR1P43307 ZNF738-205ENST00000597810 747 ntAPPRIS ALT2 TSL 3 BASIC6.27□□□□□ -1.41
SSR1P43307 LINC02536-201ENST00000625799 625 ntTSL 3 BASIC6.27□□□□□ -1.41
SSR1P43307 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
SSR1P43307 SMG1P7-201ENST00000565246 2704 ntBASIC6.27□□□□□ -1.41
SSR1P43307 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
SSR1P43307 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC6.27□□□□□ -1.41
SSR1P43307 AC097461.1-201ENST00000568928 2821 ntBASIC6.27□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 109.4 ms