Protein–RNA interactions for Protein: P31276

HOXC13, Homeobox protein Hox-C13, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC13P31276 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC6.27□□□□□ -1.41
HOXC13P31276 YWHAEP1-201ENST00000453697 763 ntBASIC6.27□□□□□ -1.41
HOXC13P31276 RPSAP39-201ENST00000467439 883 ntBASIC6.27□□□□□ -1.41
HOXC13P31276 RGS1-203ENST00000469578 1034 ntTSL 2 BASIC6.27□□□□□ -1.41
HOXC13P31276 SLC24A5-204ENST00000482911 2984 ntTSL 2 BASIC6.27□□□□□ -1.41
HOXC13P31276 AGGF1P3-201ENST00000493675 1213 ntBASIC6.27□□□□□ -1.41
HOXC13P31276 PPP4R1L-209ENST00000497138 4680 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
HOXC13P31276 AP000926.3-201ENST00000497201 299 ntBASIC6.27□□□□□ -1.41
HOXC13P31276 AC008443.2-201ENST00000499096 566 ntTSL 2 BASIC6.27□□□□□ -1.41
HOXC13P31276 AP001960.1-201ENST00000506494 658 ntBASIC6.27□□□□□ -1.41
HOXC13P31276 ERVH-1-201ENST00000507666 639 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
HOXC13P31276 AC010260.1-201ENST00000511484 664 ntTSL 3 BASIC6.27□□□□□ -1.41
HOXC13P31276 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC6.27□□□□□ -1.41
HOXC13P31276 AP000859.1-201ENST00000525536 307 ntBASIC6.27□□□□□ -1.41
HOXC13P31276 AP003396.4-201ENST00000527574 265 ntBASIC6.27□□□□□ -1.41
HOXC13P31276 MYL6-213ENST00000549017 502 ntTSL 3 BASIC6.27□□□□□ -1.41
HOXC13P31276 PPFIA2-219ENST00000550359 3808 ntTSL 2 BASIC6.27□□□□□ -1.41
HOXC13P31276 AP001007.3-201ENST00000560744 356 ntTSL 5 BASIC6.27□□□□□ -1.41
HOXC13P31276 AC106037.2-201ENST00000578583 447 ntTSL 5 BASIC6.27□□□□□ -1.41
HOXC13P31276 AC011990.1-201ENST00000592809 734 ntTSL 3 BASIC6.27□□□□□ -1.41
HOXC13P31276 ZNF738-205ENST00000597810 747 ntAPPRIS ALT2 TSL 3 BASIC6.27□□□□□ -1.41
HOXC13P31276 ZNF43-209ENST00000598288 560 ntTSL 4 BASIC6.27□□□□□ -1.41
HOXC13P31276 AC004890.3-201ENST00000605566 1095 ntBASIC6.27□□□□□ -1.41
HOXC13P31276 AC245014.3-201ENST00000618589 347 ntBASIC6.27□□□□□ -1.41
HOXC13P31276 AL357562.1-201ENST00000624911 609 ntBASIC6.27□□□□□ -1.41
HOXC13P31276 ZNF610-202ENST00000327920 1855 ntAPPRIS P3 TSL 2 BASIC6.27□□□□□ -1.41
HOXC13P31276 DOCK9-203ENST00000376460 7549 ntAPPRIS P2 TSL 5 BASIC6.27□□□□□ -1.41
HOXC13P31276 STYX-202ENST00000442123 4554 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
HOXC13P31276 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC6.27□□□□□ -1.41
HOXC13P31276 CR788268.1-201ENST00000603931 1809 ntBASIC6.27□□□□□ -1.41
HOXC13P31276 SPEF2-202ENST00000356031 5681 ntAPPRIS P2 TSL 1 (best) BASIC6.27□□□□□ -1.41
HOXC13P31276 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC6.27□□□□□ -1.41
HOXC13P31276 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
HOXC13P31276 MEF2C-249ENST00000637481 6088 ntTSL 5 BASIC6.26□□□□□ -1.41
HOXC13P31276 ZNF644-204ENST00000370440 5702 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
HOXC13P31276 GRIK1-201ENST00000327783 3179 ntTSL 5 BASIC6.26□□□□□ -1.41
HOXC13P31276 PTPRR-204ENST00000440835 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC6.26□□□□□ -1.41
HOXC13P31276 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
HOXC13P31276 CCT6B-203ENST00000436961 1639 ntTSL 2 BASIC6.26□□□□□ -1.41
HOXC13P31276 PRRC1-202ENST00000442138 5504 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
HOXC13P31276 FRS2-209ENST00000550389 6600 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
HOXC13P31276 MUT-201ENST00000274813 3749 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
HOXC13P31276 ZC2HC1B-201ENST00000237275 1002 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
HOXC13P31276 HBG1-201ENST00000330597 808 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
HOXC13P31276 AL672167.2-201ENST00000377164 879 ntBASIC6.26□□□□□ -1.41
HOXC13P31276 RNU6-1320P-201ENST00000390838 107 ntBASIC6.26□□□□□ -1.41
HOXC13P31276 RNU6-1269P-201ENST00000391139 107 ntBASIC6.26□□□□□ -1.41
HOXC13P31276 AL121977.1-201ENST00000401636 979 ntBASIC6.26□□□□□ -1.41
HOXC13P31276 RNU4-64P-201ENST00000410795 131 ntBASIC6.26□□□□□ -1.41
HOXC13P31276 GAS5-202ENST00000414075 413 ntTSL 2 BASIC6.26□□□□□ -1.41
HOXC13P31276 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC6.26□□□□□ -1.41
HOXC13P31276 BX119321.1-201ENST00000428912 797 ntBASIC6.26□□□□□ -1.41
HOXC13P31276 DEFA9P-201ENST00000433042 285 ntBASIC6.26□□□□□ -1.41
HOXC13P31276 FTLP8-201ENST00000446770 267 ntBASIC6.26□□□□□ -1.41
HOXC13P31276 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC6.26□□□□□ -1.41
HOXC13P31276 RAB28P2-201ENST00000454299 641 ntBASIC6.26□□□□□ -1.41
HOXC13P31276 SEPT14P1-201ENST00000458703 648 ntBASIC6.26□□□□□ -1.41
HOXC13P31276 RNU6-599P-201ENST00000459383 107 ntBASIC6.26□□□□□ -1.41
HOXC13P31276 RNU6-1193P-201ENST00000459461 107 ntBASIC6.26□□□□□ -1.41
HOXC13P31276 AC107015.1-201ENST00000466902 747 ntBASIC6.26□□□□□ -1.41
HOXC13P31276 AC092865.4-201ENST00000477936 615 ntBASIC6.26□□□□□ -1.41
HOXC13P31276 ATP5LP3-201ENST00000514223 304 ntBASIC6.26□□□□□ -1.41
HOXC13P31276 LINC02055-205ENST00000521090 774 ntTSL 3 BASIC6.26□□□□□ -1.41
HOXC13P31276 AC013644.1-201ENST00000523724 555 ntTSL 4 BASIC6.26□□□□□ -1.41
HOXC13P31276 AC137590.1-201ENST00000542422 495 ntTSL 3 BASIC6.26□□□□□ -1.41
HOXC13P31276 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC6.26□□□□□ -1.41
HOXC13P31276 GNG2-208ENST00000554875 430 ntTSL 5 BASIC6.26□□□□□ -1.41
HOXC13P31276 C15orf41-204ENST00000562877 764 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
HOXC13P31276 UBA52-209ENST00000597451 514 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
HOXC13P31276 AL645933.2-201ENST00000606743 1207 ntBASIC6.26□□□□□ -1.41
HOXC13P31276 RNU6-368P-201ENST00000620928 107 ntBASIC6.26□□□□□ -1.41
HOXC13P31276 RNU6-538P-201ENST00000622329 107 ntBASIC6.26□□□□□ -1.41
HOXC13P31276 OR5H15-202ENST00000641450 1229 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
HOXC13P31276 EEF1A1P14-201ENST00000421195 1376 ntBASIC6.26□□□□□ -1.41
HOXC13P31276 PHC3-203ENST00000467570 2595 ntTSL 2 BASIC6.26□□□□□ -1.41
HOXC13P31276 PAX8-AS1-202ENST00000422956 11799 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
HOXC13P31276 ANKRD17-203ENST00000509867 8105 ntAPPRIS ALT2 TSL 1 (best) BASIC6.26□□□□□ -1.41
HOXC13P31276 IBTK-210ENST00000610980 5195 ntTSL 5 BASIC6.26□□□□□ -1.41
HOXC13P31276 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
HOXC13P31276 ZNF254-207ENST00000613065 4244 ntTSL 3 BASIC6.26□□□□□ -1.41
HOXC13P31276 DNHD1-212ENST00000527990 14298 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
HOXC13P31276 IGIP-201ENST00000333305 3458 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
HOXC13P31276 VPS35-201ENST00000299138 6790 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
HOXC13P31276 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
HOXC13P31276 SYNE2-216ENST00000555002 11532 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
HOXC13P31276 DBT-201ENST00000370131 1521 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
HOXC13P31276 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC6.25□□□□□ -1.41
HOXC13P31276 VCAM1-201ENST00000294728 3083 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
HOXC13P31276 CEP128-202ENST00000281129 4461 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
HOXC13P31276 PDZRN4-203ENST00000539469 3041 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
HOXC13P31276 TAAR1-201ENST00000275216 1020 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
HOXC13P31276 Y_RNA.62-201ENST00000362840 99 ntBASIC6.25□□□□□ -1.41
HOXC13P31276 OR13C3-201ENST00000374781 1108 ntBASIC6.25□□□□□ -1.41
HOXC13P31276 OR2J1-201ENST00000377171 1273 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
HOXC13P31276 TMBIM4-203ENST00000398033 844 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
HOXC13P31276 RN7SKP166-201ENST00000410812 305 ntBASIC6.25□□□□□ -1.41
HOXC13P31276 AC245096.1-201ENST00000413104 546 ntBASIC6.25□□□□□ -1.41
HOXC13P31276 LINC01614-201ENST00000415479 648 ntTSL 2 BASIC6.25□□□□□ -1.41
HOXC13P31276 CCNB1IP1P1-201ENST00000428976 839 ntBASIC6.25□□□□□ -1.41
HOXC13P31276 HMGB3P10-201ENST00000434734 572 ntBASIC6.25□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 101.4 ms