Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC5.97□□□□□ -1.45
HLA-DPA1P20036 MOSPD2-206ENST00000497603 775 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
HLA-DPA1P20036 LINC00632-202ENST00000498732 746 ntTSL 3 BASIC5.97□□□□□ -1.45
HLA-DPA1P20036 LINC01091-201ENST00000508111 645 ntTSL 5 BASIC5.97□□□□□ -1.45
HLA-DPA1P20036 B4GALNT2P1-201ENST00000508857 307 ntBASIC5.97□□□□□ -1.45
HLA-DPA1P20036 AC010260.1-201ENST00000511484 664 ntTSL 3 BASIC5.97□□□□□ -1.45
HLA-DPA1P20036 RN7SKP238-201ENST00000516483 249 ntBASIC5.97□□□□□ -1.45
HLA-DPA1P20036 IGHVII-60-1-201ENST00000519079 256 ntBASIC5.97□□□□□ -1.45
HLA-DPA1P20036 AC103726.2-201ENST00000523318 411 ntTSL 2 BASIC5.97□□□□□ -1.45
HLA-DPA1P20036 AC008680.1-201ENST00000523398 283 ntTSL 3 BASIC5.97□□□□□ -1.45
HLA-DPA1P20036 AC002056.2-201ENST00000532913 284 ntTSL 5 BASIC5.97□□□□□ -1.45
HLA-DPA1P20036 CREBZF-209ENST00000534224 545 ntTSL 4 BASIC5.97□□□□□ -1.45
HLA-DPA1P20036 RPL36A-209ENST00000553110 429 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
HLA-DPA1P20036 AL139022.1-201ENST00000556127 486 ntTSL 5 BASIC5.97□□□□□ -1.45
HLA-DPA1P20036 AC020704.1-201ENST00000559394 454 ntTSL 3 BASIC5.97□□□□□ -1.45
HLA-DPA1P20036 CYCSP38-201ENST00000559840 322 ntBASIC5.97□□□□□ -1.45
HLA-DPA1P20036 U95743.1-201ENST00000573369 1001 ntTSL 5 BASIC5.97□□□□□ -1.45
HLA-DPA1P20036 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
HLA-DPA1P20036 SETSIP-202ENST00000596516 909 ntAPPRIS P2 BASIC5.97□□□□□ -1.45
HLA-DPA1P20036 AC008750.7-201ENST00000600765 559 ntTSL 4 BASIC5.97□□□□□ -1.45
HLA-DPA1P20036 AC135983.2-201ENST00000604301 628 ntTSL 5 BASIC5.97□□□□□ -1.45
HLA-DPA1P20036 AC097376.2-202ENST00000608345 433 ntTSL 3 BASIC5.97□□□□□ -1.45
HLA-DPA1P20036 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC5.97□□□□□ -1.45
HLA-DPA1P20036 MIR6809-201ENST00000612189 116 ntBASIC5.97□□□□□ -1.45
HLA-DPA1P20036 MIR6778-201ENST00000617912 73 ntBASIC5.97□□□□□ -1.45
HLA-DPA1P20036 AJ009632.2-209ENST00000634853 933 ntTSL 5 BASIC5.97□□□□□ -1.45
HLA-DPA1P20036 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC5.97□□□□□ -1.45
HLA-DPA1P20036 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC5.97□□□□□ -1.45
HLA-DPA1P20036 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
HLA-DPA1P20036 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
HLA-DPA1P20036 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC5.97□□□□□ -1.45
HLA-DPA1P20036 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
HLA-DPA1P20036 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC5.97□□□□□ -1.45
HLA-DPA1P20036 AL161756.3-201ENST00000641216 2071 ntBASIC5.97□□□□□ -1.45
HLA-DPA1P20036 CHD2-215ENST00000628375 3202 ntTSL 5 BASIC5.97□□□□□ -1.45
HLA-DPA1P20036 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC5.97□□□□□ -1.45
HLA-DPA1P20036 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC5.97□□□□□ -1.45
HLA-DPA1P20036 AC008163.1-201ENST00000636281 1455 ntTSL 5 BASIC5.96□□□□□ -1.45
HLA-DPA1P20036 PDZRN4-203ENST00000539469 3041 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
HLA-DPA1P20036 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
HLA-DPA1P20036 NUCB2-220ENST00000622082 1369 ntAPPRIS P2 TSL 5 BASIC5.96□□□□□ -1.45
HLA-DPA1P20036 DCAF8L1-201ENST00000441525 3457 ntAPPRIS P1 BASIC5.96□□□□□ -1.45
HLA-DPA1P20036 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
HLA-DPA1P20036 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
HLA-DPA1P20036 KIF27-204ENST00000413982 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC5.96□□□□□ -1.46
HLA-DPA1P20036 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC5.96□□□□□ -1.46
HLA-DPA1P20036 LINC01504-201ENST00000436054 2078 ntTSL 2 BASIC5.96□□□□□ -1.46
HLA-DPA1P20036 TAS2R16-201ENST00000249284 997 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
HLA-DPA1P20036 RN7SKP186-201ENST00000365371 303 ntBASIC5.96□□□□□ -1.46
HLA-DPA1P20036 LINC00446-201ENST00000414743 459 ntTSL 5 BASIC5.96□□□□□ -1.46
HLA-DPA1P20036 AL160163.1-201ENST00000417465 403 ntTSL 3 BASIC5.96□□□□□ -1.46
HLA-DPA1P20036 LINC02246-202ENST00000418954 717 ntTSL 2 BASIC5.96□□□□□ -1.46
HLA-DPA1P20036 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC5.96□□□□□ -1.46
HLA-DPA1P20036 ATP5A1P8-201ENST00000423669 1291 ntBASIC5.96□□□□□ -1.46
HLA-DPA1P20036 AL391704.3-201ENST00000425365 831 ntTSL 3 BASIC5.96□□□□□ -1.46
HLA-DPA1P20036 AC115283.1-201ENST00000427353 400 ntBASIC5.96□□□□□ -1.46
HLA-DPA1P20036 RPL12P16-201ENST00000431098 498 ntBASIC5.96□□□□□ -1.46
HLA-DPA1P20036 AC009227.2-201ENST00000432599 511 ntTSL 3 BASIC5.96□□□□□ -1.46
HLA-DPA1P20036 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
HLA-DPA1P20036 AC110602.1-201ENST00000437414 318 ntBASIC5.96□□□□□ -1.46
HLA-DPA1P20036 BBIP1-208ENST00000454061 812 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
HLA-DPA1P20036 AC004692.2-201ENST00000457315 355 ntTSL 3 BASIC5.96□□□□□ -1.46
HLA-DPA1P20036 LINC01780-202ENST00000457683 391 ntTSL 3 BASIC5.96□□□□□ -1.46
HLA-DPA1P20036 AC090103.1-201ENST00000520386 485 ntTSL 2 BASIC5.96□□□□□ -1.46
HLA-DPA1P20036 ASB8-203ENST00000535988 679 ntTSL 2 BASIC5.96□□□□□ -1.46
HLA-DPA1P20036 OR9A4-201ENST00000548136 1093 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
HLA-DPA1P20036 INO80-AS1-201ENST00000558967 312 ntTSL 5 BASIC5.96□□□□□ -1.46
HLA-DPA1P20036 AL163952.1-202ENST00000569625 600 ntBASIC5.96□□□□□ -1.46
HLA-DPA1P20036 AC015727.1-201ENST00000572792 512 ntTSL 5 BASIC5.96□□□□□ -1.46
HLA-DPA1P20036 AC090415.2-201ENST00000584078 374 ntTSL 3 BASIC5.96□□□□□ -1.46
HLA-DPA1P20036 Z98949.1-204ENST00000595102 731 ntTSL 5 BASIC5.96□□□□□ -1.46
HLA-DPA1P20036 LINC01320-205ENST00000604250 857 ntTSL 5 BASIC5.96□□□□□ -1.46
HLA-DPA1P20036 AC145423.1-201ENST00000605712 336 ntBASIC5.96□□□□□ -1.46
HLA-DPA1P20036 AL138900.3-201ENST00000607010 629 ntTSL 2 BASIC5.96□□□□□ -1.46
HLA-DPA1P20036 AC108673.3-201ENST00000609183 335 ntBASIC5.96□□□□□ -1.46
HLA-DPA1P20036 AL356608.1-201ENST00000610034 820 ntBASIC5.96□□□□□ -1.46
HLA-DPA1P20036 AL139099.4-201ENST00000614802 114 ntBASIC5.96□□□□□ -1.46
HLA-DPA1P20036 Six3os1_2.1-201ENST00000616963 217 ntBASIC5.96□□□□□ -1.46
HLA-DPA1P20036 FP236241.1-206ENST00000625005 987 ntTSL 5 BASIC5.96□□□□□ -1.46
HLA-DPA1P20036 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC5.96□□□□□ -1.46
HLA-DPA1P20036 AC123767.1-201ENST00000519537 1439 ntTSL 5 BASIC5.96□□□□□ -1.46
HLA-DPA1P20036 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
HLA-DPA1P20036 FCGR3B-208ENST00000613418 2251 ntTSL 5 BASIC5.96□□□□□ -1.46
HLA-DPA1P20036 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
HLA-DPA1P20036 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
HLA-DPA1P20036 CTDSPL2-204ENST00000558966 1895 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
HLA-DPA1P20036 AC018628.1-201ENST00000624147 3819 ntBASIC5.96□□□□□ -1.46
HLA-DPA1P20036 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
HLA-DPA1P20036 CADM2-202ENST00000405615 1314 ntAPPRIS P3 TSL 1 (best) BASIC5.96□□□□□ -1.46
HLA-DPA1P20036 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC5.96□□□□□ -1.46
HLA-DPA1P20036 TTC41P-205ENST00000551270 3963 ntBASIC5.96□□□□□ -1.46
HLA-DPA1P20036 MECOM-209ENST00000472280 3593 ntTSL 5 BASIC5.96□□□□□ -1.46
HLA-DPA1P20036 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
HLA-DPA1P20036 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC5.95□□□□□ -1.46
HLA-DPA1P20036 LYARP1-201ENST00000436977 1501 ntBASIC5.95□□□□□ -1.46
HLA-DPA1P20036 HSPD1P7-201ENST00000447985 1686 ntBASIC5.95□□□□□ -1.46
HLA-DPA1P20036 SELE-204ENST00000367776 3576 ntTSL 5 BASIC5.95□□□□□ -1.46
HLA-DPA1P20036 SELE-205ENST00000367777 3576 ntTSL 5 BASIC5.95□□□□□ -1.46
HLA-DPA1P20036 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC5.95□□□□□ -1.46
HLA-DPA1P20036 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC5.95□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 163.9 ms